LdBPK_070430.1 | acetylornithine deacetylase-like protein

_IDPredictionOTHERSPmTPCS_Position
LdBPK_070430.1OTHER0.9881410.0031870.008672
No Results

  • Fasta :-

    >LdBPK_070430.1 MASLQHVRDMLAKLVSFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLAT LPSADGSVEGGLILSGHTDVVPVDGQKWASDPFVLTERDGNLYARGSCDMKAFIAVCLAL VPEWVRAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLKKCEGCIIGEPTMLDLVIAHK GIFYSYITFKGKAAHSSLQTAGYNSIEPAMRVFQKLFEMRDRFAREGPFEEGFNITHTTL CPALTTGGNAINTIPAECSLGFEFRNVPSHPASVIKKEIWDFISAETERVKLACPEGGID VVKRGEVEPFGGNKDASVVKALMAANPELPKMTKVSFCTEAGEYQAAGINSVVCGPGNIE QAHKANEFVSLEQLDKGLLVVRRVVQLMCGGSEASQL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_070430.1.fa Sequence name : LdBPK_070430 Sequence length : 397 VALUES OF COMPUTED PARAMETERS Coef20 : 4.365 CoefTot : 0.116 ChDiff : -7 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.000 1.494 0.172 0.511 MesoH : -0.236 0.514 -0.268 0.268 MuHd_075 : 36.240 15.101 7.459 5.908 MuHd_095 : 19.238 17.993 7.381 4.927 MuHd_100 : 19.144 19.214 6.343 5.229 MuHd_105 : 23.133 20.696 6.270 5.586 Hmax_075 : 13.500 12.800 2.067 4.280 Hmax_095 : 6.600 15.500 0.750 4.580 Hmax_100 : 7.700 15.500 0.750 4.580 Hmax_105 : 18.700 19.500 3.034 6.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7360 0.2640 DFMC : 0.8293 0.1707
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 397 LdBPK_070430.1 MASLQHVRDMLAKLVSFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLATLPSADGSVEGGLILSGHTDV 80 VPVDGQKWASDPFVLTERDGNLYARGSCDMKAFIAVCLALVPEWVRAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLK 160 KCEGCIIGEPTMLDLVIAHKGIFYSYITFKGKAAHSSLQTAGYNSIEPAMRVFQKLFEMRDRFAREGPFEEGFNITHTTL 240 CPALTTGGNAINTIPAECSLGFEFRNVPSHPASVIKKEIWDFISAETERVKLACPEGGIDVVKRGEVEPFGGNKDASVVK 320 ALMAANPELPKMTKVSFCTEAGEYQAAGINSVVCGPGNIEQAHKANEFVSLEQLDKGLLVVRRVVQLMCGGSEASQL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_070430.1 8 ASLQHVR|DM 0.114 . LdBPK_070430.1 13 VRDMLAK|LV 0.088 . LdBPK_070430.1 23 FETVSAR|TN 0.083 . LdBPK_070430.1 42 LAACGVK|HV 0.081 . LdBPK_070430.1 48 KHVTVMR|SA 0.225 . LdBPK_070430.1 87 VPVDGQK|WA 0.068 . LdBPK_070430.1 98 PFVLTER|DG 0.076 . LdBPK_070430.1 105 DGNLYAR|GS 0.111 . LdBPK_070430.1 111 RGSCDMK|AF 0.072 . LdBPK_070430.1 126 LVPEWVR|AP 0.069 . LdBPK_070430.1 130 WVRAPPR|KP 0.087 . LdBPK_070430.1 131 VRAPPRK|PV 0.180 . LdBPK_070430.1 149 TTFDGVR|QL 0.089 . LdBPK_070430.1 153 GVRQLMR|ER 0.091 . LdBPK_070430.1 155 RQLMRER|GS 0.079 . LdBPK_070430.1 160 ERGSDLK|KC 0.066 . LdBPK_070430.1 161 RGSDLKK|CE 0.170 . LdBPK_070430.1 180 DLVIAHK|GI 0.068 . LdBPK_070430.1 190 YSYITFK|GK 0.066 . LdBPK_070430.1 192 YITFKGK|AA 0.085 . LdBPK_070430.1 211 SIEPAMR|VF 0.086 . LdBPK_070430.1 215 AMRVFQK|LF 0.071 . LdBPK_070430.1 220 QKLFEMR|DR 0.115 . LdBPK_070430.1 222 LFEMRDR|FA 0.137 . LdBPK_070430.1 225 MRDRFAR|EG 0.304 . LdBPK_070430.1 265 SLGFEFR|NV 0.143 . LdBPK_070430.1 276 HPASVIK|KE 0.072 . LdBPK_070430.1 277 PASVIKK|EI 0.169 . LdBPK_070430.1 289 ISAETER|VK 0.080 . LdBPK_070430.1 291 AETERVK|LA 0.066 . LdBPK_070430.1 303 GGIDVVK|RG 0.067 . LdBPK_070430.1 304 GIDVVKR|GE 0.194 . LdBPK_070430.1 314 EPFGGNK|DA 0.086 . LdBPK_070430.1 320 KDASVVK|AL 0.080 . LdBPK_070430.1 331 ANPELPK|MT 0.067 . LdBPK_070430.1 334 ELPKMTK|VS 0.061 . LdBPK_070430.1 364 NIEQAHK|AN 0.063 . LdBPK_070430.1 376 SLEQLDK|GL 0.068 . LdBPK_070430.1 382 KGLLVVR|RV 0.089 . LdBPK_070430.1 383 GLLVVRR|VV 0.150 . ____________________________^_________________

  • Fasta :-

    >LdBPK_070430.1 ATGGCCTCCCTCCAACATGTGCGTGATATGCTGGCGAAGCTGGTTAGCTTCGAAACTGTG AGTGCGCGCACGAACCTGCCGCTGATCGAGTACGTGCAGGGGTATCTTGCGGCGTGCGGC GTGAAGCACGTGACGGTGATGCGATCGGCGGATGGGATCCATGCAAACCTGTTGGCGACG CTACCAAGCGCGGACGGCAGCGTGGAAGGCGGGCTGATCCTGAGCGGGCACACAGATGTT GTGCCAGTGGACGGGCAGAAGTGGGCAAGTGACCCGTTCGTGCTGACGGAGCGCGATGGC AACCTTTACGCGCGCGGGTCGTGCGACATGAAGGCGTTCATTGCTGTGTGCCTTGCCCTT GTGCCGGAGTGGGTGCGTGCGCCACCGCGGAAGCCCGTGCAAATCGCGCTTACTTACGAC GAGGAGACGACGTTTGACGGCGTGCGGCAGCTGATGCGCGAGCGGGGAAGCGATCTGAAG AAGTGCGAGGGCTGCATCATCGGCGAGCCGACGATGCTCGACCTCGTGATTGCGCACAAG GGCATCTTCTACAGCTACATCACGTTCAAAGGCAAGGCTGCACACTCTTCGCTGCAGACT GCGGGGTACAACTCCATCGAGCCTGCGATGCGCGTGTTTCAGAAGCTTTTCGAGATGCGT GATCGCTTCGCCCGCGAGGGCCCCTTCGAGGAGGGCTTCAACATCACCCACACGACTCTC TGCCCGGCTCTCACGACCGGCGGCAACGCGATAAACACGATCCCTGCAGAGTGCTCGCTG GGCTTCGAGTTCCGCAACGTGCCGTCTCACCCTGCATCTGTGATTAAGAAGGAGATCTGG GACTTTATCAGCGCGGAGACGGAGCGCGTGAAGCTGGCGTGCCCGGAGGGGGGCATAGAC GTGGTGAAGCGCGGCGAAGTCGAGCCCTTTGGCGGCAATAAGGATGCGTCGGTCGTGAAG GCCCTCATGGCTGCCAACCCTGAGCTGCCGAAGATGACGAAGGTGTCGTTCTGCACGGAG GCGGGCGAGTACCAGGCCGCTGGCATCAACTCCGTGGTGTGCGGCCCCGGCAACATTGAG CAGGCCCACAAGGCGAACGAGTTCGTGTCGCTGGAGCAGCTGGACAAGGGCCTGTTGGTG GTTCGCCGCGTTGTGCAGCTGATGTGCGGCGGGAGCGAGGCCAGCCAGTTGTGA
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  • Fasta :-

    MASLQHVRDMLAKLVSFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLAT LPSADGSVEGGLILSGHTDVVPVDGQKWASDPFVLTERDGNLYARGSCDMKAFIAVCLAL VPEWVRAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLKKCEGCIIGEPTMLDLVIAHK GIFYSYITFKGKAAHSSLQTAGYNSIEPAMRVFQKLFEMRDRFAREGPFEEGFNITHTTL CPALTTGGNAINTIPAECSLGFEFRNVPSHPASVIKKEIWDFISAETERVKLACPEGGID VVKRGEVEPFGGNKDASVVKALMAANPELPKMTKVSFCTEAGEYQAAGINSVVCGPGNIE QAHKANEFVSLEQLDKGLLVVRRVVQLMCGGSEASQL

    No Results
  • title: metal binding site
  • coordinates: H77,D109,E141,E142,E169,H363
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India