LdBPK_091360.1 | PPPDE putative peptidase domain containing protein, putative

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  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_091360.1OTHER0.9894170.0082560.002327
No Results

  • Fasta :-

    >LdBPK_091360.1 MHATKSGVTTLSASAGKSDVPVMPAGYEDAAGQPNAVFVNVYDIMKSNSWLWSVGLGVHH AGIQVYDKEYQYGRCEEGSGVRVVEPRHSPPHIFREQFFVGQTQLSALEVRELVATLEQR DTWQGNKYHLVKHNCIHFAHALCEALLPPHVRVAQMRTALPSTYQSAYMEEVEVDGQQYS LPVLIPPHVSRLGSYAASYLPESVLQLLDSMDNPFSTP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_091360.1.fa Sequence name : LdBPK_091360 Sequence length : 218 VALUES OF COMPUTED PARAMETERS Coef20 : 4.024 CoefTot : 0.028 ChDiff : -7 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.000 -0.077 0.530 MesoH : -0.423 0.154 -0.371 0.204 MuHd_075 : 1.994 1.297 1.319 1.407 MuHd_095 : 20.807 16.035 8.136 4.988 MuHd_100 : 16.974 14.042 6.187 3.819 MuHd_105 : 7.962 9.151 2.718 1.893 Hmax_075 : 9.400 4.800 0.851 1.880 Hmax_095 : 13.200 9.800 1.836 3.710 Hmax_100 : 13.200 9.800 1.705 3.710 Hmax_105 : 12.200 7.875 1.388 3.089 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9065 0.0935 DFMC : 0.8400 0.1600
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 218 LdBPK_091360.1 MHATKSGVTTLSASAGKSDVPVMPAGYEDAAGQPNAVFVNVYDIMKSNSWLWSVGLGVHHAGIQVYDKEYQYGRCEEGSG 80 VRVVEPRHSPPHIFREQFFVGQTQLSALEVRELVATLEQRDTWQGNKYHLVKHNCIHFAHALCEALLPPHVRVAQMRTAL 160 PSTYQSAYMEEVEVDGQQYSLPVLIPPHVSRLGSYAASYLPESVLQLLDSMDNPFSTP 240 ................................................................................ 80 ................................................................................ 160 .......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_091360.1 5 --MHATK|SG 0.077 . LdBPK_091360.1 17 LSASAGK|SD 0.090 . LdBPK_091360.1 46 NVYDIMK|SN 0.072 . LdBPK_091360.1 68 GIQVYDK|EY 0.067 . LdBPK_091360.1 74 KEYQYGR|CE 0.094 . LdBPK_091360.1 82 EEGSGVR|VV 0.084 . LdBPK_091360.1 87 VRVVEPR|HS 0.118 . LdBPK_091360.1 95 SPPHIFR|EQ 0.115 . LdBPK_091360.1 111 LSALEVR|EL 0.099 . LdBPK_091360.1 120 VATLEQR|DT 0.118 . LdBPK_091360.1 127 DTWQGNK|YH 0.055 . LdBPK_091360.1 132 NKYHLVK|HN 0.074 . LdBPK_091360.1 152 LLPPHVR|VA 0.084 . LdBPK_091360.1 157 VRVAQMR|TA 0.143 . LdBPK_091360.1 191 IPPHVSR|LG 0.093 . ____________________________^_________________

  • Fasta :-

    >LdBPK_091360.1 ATGCATGCCACGAAATCCGGTGTTACAACCCTCTCGGCTAGCGCCGGCAAGTCGGACGTA CCGGTTATGCCCGCGGGCTACGAGGACGCAGCTGGCCAGCCCAACGCTGTCTTCGTCAAC GTGTACGACATCATGAAGTCCAACTCTTGGCTTTGGTCGGTCGGCCTTGGCGTGCACCAC GCTGGTATTCAGGTGTACGACAAGGAGTACCAGTACGGCCGCTGCGAGGAGGGCAGCGGC GTCCGTGTCGTCGAGCCTCGCCACTCGCCGCCGCACATTTTCCGCGAGCAGTTCTTTGTC GGGCAGACACAGCTGAGCGCTCTAGAAGTGCGGGAGCTCGTTGCCACGCTCGAGCAGCGT GACACGTGGCAGGGCAACAAGTATCACCTCGTGAAGCACAACTGCATCCACTTCGCGCAC GCACTCTGCGAAGCGCTGCTGCCGCCTCACGTACGGGTGGCACAGATGCGCACGGCGCTC CCGTCTACGTACCAGAGTGCGTACATGGAGGAAGTCGAGGTGGATGGCCAACAGTACTCA TTGCCGGTGCTCATTCCTCCTCACGTGAGCCGCCTGGGCAGCTACGCTGCCTCCTACCTG CCAGAGTCCGTTCTGCAGCTGCTGGACTCTATGGACAACCCCTTCAGCACCCCCTGA
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  • Fasta :-

    MHATKSGVTTLSASAGKSDVPVMPAGYEDAAGQPNAVFVNVYDIMKSNSWLWSVGLGVHH AGIQVYDKEYQYGRCEEGSGVRVVEPRHSPPHIFREQFFVGQTQLSALEVRELVATLEQR DTWQGNKYHLVKHNCIHFAHALCEALLPPHVRVAQMRTALPSTYQSAYMEEVEVDGQQYS LPVLIPPHVSRLGSYAASYLPESVLQLLDSMDNPFSTP

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IDSitePeptideScoreMethod
LdBPK_091360.189 SEPRHSPPHI0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India