LdBPK_091370.1 | PPPDE putative peptidase domain containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_091370.1OTHER0.9999660.0000330.000001
No Results

  • Fasta :-

    >LdBPK_091370.1 MDGASADGGDGAPASAERHSLKPLMWIEEVRDASQPNAVFLNVYDVSGSSTLLCSVGWGV HHVGVQVYGKEYQYGHRPIGKGIGSVKPRHSPPHTYREQFFLGQTQLSAFEVEKLVVAFS EKVEWLGNNYHLVKHNCIDFARAFCEALLPPAVRVEQARRAEEAGLPQKMHMVEVEVDGM RHSVPVLIPHHVDRLARYAAHYLPKSSMRSFDRLESSFFSMSEVPQERGQPTAADPNANR STTPTPQPRTRTGH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_091370.1.fa Sequence name : LdBPK_091370 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 2.904 CoefTot : 0.000 ChDiff : -1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.141 0.093 0.510 MesoH : -0.727 0.037 -0.465 0.149 MuHd_075 : 18.881 8.136 4.462 1.842 MuHd_095 : 38.066 14.989 8.600 5.440 MuHd_100 : 31.661 12.220 7.071 3.956 MuHd_105 : 19.201 6.496 4.611 2.153 Hmax_075 : -1.633 0.467 -2.155 0.723 Hmax_095 : 10.800 5.700 1.138 3.280 Hmax_100 : 10.400 5.300 0.859 2.620 Hmax_105 : -1.000 0.817 -1.687 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9588 0.0412 DFMC : 0.9244 0.0756
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 LdBPK_091370.1 MDGASADGGDGAPASAERHSLKPLMWIEEVRDASQPNAVFLNVYDVSGSSTLLCSVGWGVHHVGVQVYGKEYQYGHRPIG 80 KGIGSVKPRHSPPHTYREQFFLGQTQLSAFEVEKLVVAFSEKVEWLGNNYHLVKHNCIDFARAFCEALLPPAVRVEQARR 160 AEEAGLPQKMHMVEVEVDGMRHSVPVLIPHHVDRLARYAAHYLPKSSMRSFDRLESSFFSMSEVPQERGQPTAADPNANR 240 STTPTPQPRTRTGH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_091370.1 18 APASAER|HS 0.095 . LdBPK_091370.1 22 AERHSLK|PL 0.091 . LdBPK_091370.1 31 MWIEEVR|DA 0.149 . LdBPK_091370.1 70 GVQVYGK|EY 0.065 . LdBPK_091370.1 77 EYQYGHR|PI 0.133 . LdBPK_091370.1 81 GHRPIGK|GI 0.097 . LdBPK_091370.1 87 KGIGSVK|PR 0.064 . LdBPK_091370.1 89 IGSVKPR|HS 0.149 . LdBPK_091370.1 97 SPPHTYR|EQ 0.105 . LdBPK_091370.1 114 SAFEVEK|LV 0.066 . LdBPK_091370.1 122 VVAFSEK|VE 0.058 . LdBPK_091370.1 134 NNYHLVK|HN 0.064 . LdBPK_091370.1 142 NCIDFAR|AF 0.110 . LdBPK_091370.1 154 LLPPAVR|VE 0.071 . LdBPK_091370.1 159 VRVEQAR|RA 0.146 . LdBPK_091370.1 160 RVEQARR|AE 0.197 . LdBPK_091370.1 169 EAGLPQK|MH 0.059 . LdBPK_091370.1 181 VEVDGMR|HS 0.080 . LdBPK_091370.1 194 IPHHVDR|LA 0.158 . LdBPK_091370.1 197 HVDRLAR|YA 0.400 . LdBPK_091370.1 205 AAHYLPK|SS 0.102 . LdBPK_091370.1 209 LPKSSMR|SF 0.238 . LdBPK_091370.1 213 SMRSFDR|LE 0.097 . LdBPK_091370.1 228 SEVPQER|GQ 0.082 . LdBPK_091370.1 240 ADPNANR|ST 0.106 . LdBPK_091370.1 249 TPTPQPR|TR 0.099 . LdBPK_091370.1 251 TPQPRTR|TG 0.118 . ____________________________^_________________

  • Fasta :-

    >LdBPK_091370.1 ATGGACGGCGCTAGCGCAGATGGCGGGGATGGCGCTCCTGCGTCGGCGGAGCGCCATTCT CTGAAGCCGCTTATGTGGATAGAGGAGGTGCGAGACGCGAGCCAGCCGAACGCCGTCTTT CTCAATGTGTACGACGTGAGCGGCAGTAGCACGCTCCTGTGCTCCGTTGGGTGGGGCGTG CATCATGTCGGCGTGCAGGTGTACGGCAAGGAGTACCAGTACGGCCATCGCCCCATCGGC AAAGGCATCGGCAGTGTCAAGCCTCGCCACTCGCCTCCGCACACGTACCGGGAGCAGTTC TTCCTTGGTCAGACGCAGCTGAGTGCGTTCGAGGTGGAGAAGCTGGTGGTGGCCTTCTCG GAAAAGGTGGAGTGGCTGGGTAACAACTACCACCTCGTGAAGCACAACTGCATCGACTTC GCTCGAGCATTTTGCGAGGCGCTCCTGCCGCCCGCAGTACGCGTGGAGCAGGCGCGGCGG GCGGAGGAGGCGGGTCTGCCGCAGAAGATGCACATGGTGGAGGTCGAGGTGGACGGAATG CGGCACTCGGTGCCGGTGCTCATACCGCACCACGTCGATCGGCTAGCGCGGTACGCAGCG CACTACCTGCCGAAATCCTCCATGCGGAGCTTCGACCGACTCGAAAGCTCGTTCTTCAGC ATGTCCGAGGTGCCCCAGGAGCGGGGGCAGCCTACCGCCGCGGATCCCAACGCAAATCGC AGCACAACCCCGACACCGCAGCCGCGCACCCGCACAGGTCATTAG
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  • Fasta :-

    MDGASADGGDGAPASAERHSLKPLMWIEEVRDASQPNAVFLNVYDVSGSSTLLCSVGWGV HHVGVQVYGKEYQYGHRPIGKGIGSVKPRHSPPHTYREQFFLGQTQLSAFEVEKLVVAFS EKVEWLGNNYHLVKHNCIDFARAFCEALLPPAVRVEQARRAEEAGLPQKMHMVEVEVDGM RHSVPVLIPHHVDRLARYAAHYLPKSSMRSFDRLESSFFSMSEVPQERGQPTAADPNANR STTPTPQPRTRTGH

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_091370.120 SAERHSLKPL0.996unspLdBPK_091370.191 SKPRHSPPHT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India