LdBPK_130090.1 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LdBPK_130090.1OTHER0.9650820.0113300.023588
No Results

  • Fasta :-

    >LdBPK_130090.1 MQAYTQLEKLCQKVYRLAHLLSLGAWDSKTMMPSKGAAARGAALGELYGLIAEMITSPST KALLDEAETAKAELTTVQQANLRELRRMYTSQAALPTEFSVLKTKLSSTTPLIWVKCRSN NDFATFLPALKEMIALARREAQYRSTATGKPLYEALFNQYESGMTLETLEKILLDVKSWL PELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFMGM VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPVEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLVPLLKEYLGDQPAFSRENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWSMGAFGYFPT YSLGSMFAAQLMATIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYNTEDLIVKA TGEALNPKYFREYLERRYLRQED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_130090.1.fa Sequence name : LdBPK_130090 Sequence length : 503 VALUES OF COMPUTED PARAMETERS Coef20 : 3.866 CoefTot : -0.606 ChDiff : -12 ZoneTo : 45 KR : 6 DE : 2 CleavSite : 42 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.729 0.105 0.660 MesoH : -0.703 0.186 -0.443 0.163 MuHd_075 : 22.816 11.739 7.095 4.820 MuHd_095 : 38.561 27.405 12.168 9.052 MuHd_100 : 44.730 34.338 15.052 10.821 MuHd_105 : 44.397 36.902 15.985 10.841 Hmax_075 : 14.000 11.317 0.904 3.060 Hmax_095 : 8.488 11.725 3.921 4.104 Hmax_100 : 16.200 21.700 4.930 5.930 Hmax_105 : 13.900 27.067 4.277 6.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8649 0.1351 DFMC : 0.7594 0.2406
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 503 LdBPK_130090.1 MQAYTQLEKLCQKVYRLAHLLSLGAWDSKTMMPSKGAAARGAALGELYGLIAEMITSPSTKALLDEAETAKAELTTVQQA 80 NLRELRRMYTSQAALPTEFSVLKTKLSSTTPLIWVKCRSNNDFATFLPALKEMIALARREAQYRSTATGKPLYEALFNQY 160 ESGMTLETLEKILLDVKSWLPELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFMGM 240 VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPVEMRGQPVCEARSMTIHESQSRFAEVVIGHSSAFLEFLVPLL 320 KEYLGDQPAFSRENVRLMNQTVKPGFIRIRADEVCYPLHILLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRD 400 EIGCLQDIHWSMGAFGYFPTYSLGSMFAAQLMATIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYNTEDLIVKA 480 TGEALNPKYFREYLERRYLRQED 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_130090.1 9 AYTQLEK|LC 0.055 . LdBPK_130090.1 13 LEKLCQK|VY 0.054 . LdBPK_130090.1 16 LCQKVYR|LA 0.111 . LdBPK_130090.1 29 LGAWDSK|TM 0.064 . LdBPK_130090.1 35 KTMMPSK|GA 0.078 . LdBPK_130090.1 40 SKGAAAR|GA 0.165 . LdBPK_130090.1 61 ITSPSTK|AL 0.084 . LdBPK_130090.1 71 DEAETAK|AE 0.062 . LdBPK_130090.1 83 VQQANLR|EL 0.083 . LdBPK_130090.1 86 ANLRELR|RM 0.185 . LdBPK_130090.1 87 NLRELRR|MY 0.134 . LdBPK_130090.1 103 TEFSVLK|TK 0.057 . LdBPK_130090.1 105 FSVLKTK|LS 0.067 . LdBPK_130090.1 116 TPLIWVK|CR 0.062 . LdBPK_130090.1 118 LIWVKCR|SN 0.150 . LdBPK_130090.1 131 TFLPALK|EM 0.053 . LdBPK_130090.1 138 EMIALAR|RE 0.085 . LdBPK_130090.1 139 MIALARR|EA 0.115 . LdBPK_130090.1 144 RREAQYR|ST 0.200 . LdBPK_130090.1 150 RSTATGK|PL 0.076 . LdBPK_130090.1 171 TLETLEK|IL 0.063 . LdBPK_130090.1 177 KILLDVK|SW 0.068 . LdBPK_130090.1 186 LPELLQK|IL 0.069 . LdBPK_130090.1 192 KILAAQR|DA 0.111 . LdBPK_130090.1 207 PEAPFPK|DK 0.083 . LdBPK_130090.1 209 APFPKDK|QE 0.068 . LdBPK_130090.1 215 KQEALSR|HL 0.092 . LdBPK_130090.1 229 FDFESGR|LD 0.074 . LdBPK_130090.1 242 PFMGMVK|ED 0.066 . LdBPK_130090.1 246 MVKEDSR|IT 0.082 . LdBPK_130090.1 258 DLQDFTK|GL 0.085 . LdBPK_130090.1 271 HETGHSK|YE 0.066 . LdBPK_130090.1 282 CGPVEMR|GQ 0.086 . LdBPK_130090.1 290 QPVCEAR|SM 0.223 . LdBPK_130090.1 300 IHESQSR|FA 0.145 . LdBPK_130090.1 321 FLVPLLK|EY 0.055 . LdBPK_130090.1 332 DQPAFSR|EN 0.077 . LdBPK_130090.1 336 FSRENVR|LM 0.082 . LdBPK_130090.1 343 LMNQTVK|PG 0.064 . LdBPK_130090.1 348 VKPGFIR|IR 0.079 . LdBPK_130090.1 350 PGFIRIR|AD 0.095 . LdBPK_130090.1 363 PLHILLR|YE 0.076 . LdBPK_130090.1 368 LRYEIER|AL 0.113 . LdBPK_130090.1 382 EAEDIPR|VW 0.084 . LdBPK_130090.1 387 PRVWNEK|MK 0.062 . LdBPK_130090.1 389 VWNEKMK|AY 0.078 . LdBPK_130090.1 399 GLETEGR|DE 0.108 . LdBPK_130090.1 436 QLMATIK|NE 0.058 . LdBPK_130090.1 446 GEDTVDK|CI 0.081 . LdBPK_130090.1 449 TVDKCIR|TG 0.076 . LdBPK_130090.1 459 MEPIFEK|QR 0.066 . LdBPK_130090.1 461 PIFEKQR|EK 0.089 . LdBPK_130090.1 463 FEKQREK|IW 0.069 . LdBPK_130090.1 479 TEDLIVK|AT 0.074 . LdBPK_130090.1 488 GEALNPK|YF 0.071 . LdBPK_130090.1 491 LNPKYFR|EY 0.073 . LdBPK_130090.1 496 FREYLER|RY 0.093 . LdBPK_130090.1 497 REYLERR|YL 0.162 . LdBPK_130090.1 500 LERRYLR|QE 0.266 . ____________________________^_________________

  • Fasta :-

    >LdBPK_130090.1 ATGCAGGCCTACACACAACTGGAGAAGCTCTGCCAGAAGGTGTACAGATTGGCGCACCTT CTGTCTCTCGGCGCTTGGGATTCCAAGACTATGATGCCCTCAAAGGGCGCAGCTGCCCGC GGTGCCGCCCTCGGCGAGCTCTACGGACTCATCGCTGAGATGATCACCAGCCCGAGCACG AAGGCGCTGCTGGACGAAGCAGAGACGGCCAAGGCCGAGCTCACTACTGTCCAGCAGGCG AACTTGCGCGAGCTCCGCCGCATGTACACCTCTCAAGCAGCGCTACCGACCGAGTTCAGT GTGCTCAAGACCAAGCTTTCGTCAACTACTCCGCTTATCTGGGTTAAGTGCCGCAGCAAC AACGACTTTGCGACTTTCCTGCCGGCGCTGAAGGAGATGATTGCGCTTGCGCGCAGGGAG GCGCAGTATCGCTCTACTGCGACGGGCAAGCCTCTGTACGAGGCCCTGTTCAACCAGTAC GAGAGCGGCATGACGCTGGAGACGCTGGAAAAAATCTTGCTCGATGTGAAGTCGTGGCTG CCGGAGCTGCTGCAGAAGATCCTGGCTGCACAGAGGGACGCGGGGCTGGAGGTGGTTGCG CCTGAGGCGCCCTTTCCCAAGGACAAGCAGGAGGCTCTTAGCCGCCACCTCATGGAGGTG TGGGGCTTCGACTTCGAGTCAGGTCGGCTGGACGTCTCTGAGCACCCGTTTATGGGCATG GTAAAGGAAGACTCGCGCATCACTACCGCCTACGACCTGCAGGACTTCACCAAGGGGCTC TTCGCGACGATCCACGAGACGGGCCACTCCAAGTACGAGACGAACTGCGGCCCGGTGGAG ATGCGCGGCCAGCCGGTGTGCGAGGCACGCTCGATGACGATCCACGAGAGCCAGTCGCGC TTTGCCGAGGTTGTGATTGGCCACTCCAGCGCCTTCTTGGAGTTCCTCGTTCCACTGCTG AAGGAATACCTCGGTGATCAGCCCGCATTCTCTCGGGAGAACGTGCGGCTGATGAACCAG ACGGTGAAGCCTGGCTTCATCCGGATCCGGGCGGATGAGGTGTGCTACCCGCTGCACATC TTGCTGCGCTACGAGATAGAGCGTGCACTCATCGAGGGCACGATGGAGGCAGAAGACATC CCTCGCGTGTGGAACGAGAAGATGAAGGCATACCTGGGCCTGGAGACGGAGGGCCGCGAC GAGATTGGCTGCCTGCAGGACATTCACTGGTCGATGGGCGCCTTTGGCTACTTCCCGACG TACTCGCTTGGCTCCATGTTCGCGGCGCAGCTGATGGCGACGATCAAGAATGAGCTCGGT GAGGATACAGTGGACAAGTGCATCCGCACTGGCCAGATGGAGCCGATCTTTGAGAAGCAG AGGGAGAAGATCTGGAGCCAGGGATGCCTCTACAACACGGAAGACCTGATTGTCAAGGCG ACCGGCGAAGCGCTGAACCCCAAGTACTTTCGCGAGTACCTGGAACGCCGCTACCTGCGC CAGGAGGACTGA
  • Download Fasta

  • Fasta :-

    MQAYTQLEKLCQKVYRLAHLLSLGAWDSKTMMPSKGAAARGAALGELYGLIAEMITSPST KALLDEAETAKAELTTVQQANLRELRRMYTSQAALPTEFSVLKTKLSSTTPLIWVKCRSN NDFATFLPALKEMIALARREAQYRSTATGKPLYEALFNQYESGMTLETLEKILLDVKSWL PELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFMGM VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPVEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLVPLLKEYLGDQPAFSRENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWSMGAFGYFPT YSLGSMFAAQLMATIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYNTEDLIVKA TGEALNPKYFREYLERRYLRQED

  • title: metal binding site
  • coordinates: H265,H269,E296
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India