LdBPK_190150.1 | metallo-peptidase, Clan MG, Family M24

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_190150.1OTHER0.9997300.0000350.000235
No Results

  • Fasta :-

    >LdBPK_190150.1 MPKNTDQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAK VCDLCRLGDDTITAKVKTMFKGTEKGIAFPTCISVNNCVCHNSPGVSDEATQQEIAMGDV VHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITATYNILNTALRQMRPGATIYQ VTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKK ARLGLNEMAKHGAVIPYPILFEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYT DEMLLATNKLSLSLEKKAAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_190150.1.fa Sequence name : LdBPK_190150 Sequence length : 380 VALUES OF COMPUTED PARAMETERS Coef20 : 1.893 CoefTot : -0.500 ChDiff : -9 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.465 0.988 0.050 0.458 MesoH : -0.622 0.178 -0.362 0.189 MuHd_075 : 28.167 11.654 7.249 3.979 MuHd_095 : 17.950 6.135 4.084 3.436 MuHd_100 : 6.686 3.867 0.581 0.952 MuHd_105 : 12.702 8.007 2.549 1.758 Hmax_075 : -7.350 -5.600 -4.688 0.957 Hmax_095 : -17.500 -9.188 -7.016 0.341 Hmax_100 : -20.400 -11.400 -7.971 -1.410 Hmax_105 : -18.300 -8.300 -7.669 -0.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9786 0.0214 DFMC : 0.9811 0.0189
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 380 LdBPK_190150.1 MPKNTDQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAKVCDLCRLGDDTITAKVKTMF 80 KGTEKGIAFPTCISVNNCVCHNSPGVSDEATQQEIAMGDVVHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITA 160 TYNILNTALRQMRPGATIYQVTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD 240 IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKKARLGLNEMAKHGAVIPYPIL 320 FEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYTDEMLLATNKLSLSLEKKAAK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_190150.1 3 ----MPK|NT 0.085 . LdBPK_190150.1 36 NSDVVVR|YK 0.106 . LdBPK_190150.1 38 DVVVRYK|KA 0.065 . LdBPK_190150.1 39 VVVRYKK|AA 0.315 . LdBPK_190150.1 49 WCNETLR|VL 0.092 . LdBPK_190150.1 56 VLIDATK|PG 0.058 . LdBPK_190150.1 60 ATKPGAK|VC 0.057 . LdBPK_190150.1 66 KVCDLCR|LG 0.079 . LdBPK_190150.1 75 DDTITAK|VK 0.059 . LdBPK_190150.1 77 TITAKVK|TM 0.069 . LdBPK_190150.1 81 KVKTMFK|GT 0.078 . LdBPK_190150.1 85 MFKGTEK|GI 0.059 . LdBPK_190150.1 150 EDNELGK|DE 0.077 . LdBPK_190150.1 153 ELGKDEK|AA 0.073 . LdBPK_190150.1 156 KDEKAAR|VI 0.101 . LdBPK_190150.1 170 ILNTALR|QM 0.097 . LdBPK_190150.1 173 TALRQMR|PG 0.211 . LdBPK_190150.1 187 VTDVVEK|AA 0.072 . LdBPK_190150.1 193 KAAEHYK|VT 0.065 . LdBPK_190150.1 206 VLSHMMK|RY 0.066 . LdBPK_190150.1 207 LSHMMKR|YI 0.420 . LdBPK_190150.1 214 YIIDGYR|CI 0.082 . LdBPK_190150.1 219 YRCIPQR|RV 0.125 . LdBPK_190150.1 220 RCIPQRR|VA 0.206 . LdBPK_190150.1 233 HDYDLEK|AQ 0.060 . LdBPK_190150.1 247 IVMTSGK|GK 0.067 . LdBPK_190150.1 249 MTSGKGK|LK 0.072 . LdBPK_190150.1 251 SGKGKLK|ER 0.064 . LdBPK_190150.1 253 KGKLKER|DA 0.143 . LdBPK_190150.1 256 LKERDAR|PC 0.192 . LdBPK_190150.1 261 ARPCVFK|VA 0.076 . LdBPK_190150.1 271 DSNYSVK|ME 0.096 . LdBPK_190150.1 276 VKMESAK|EV 0.110 . LdBPK_190150.1 280 SAKEVQK|EI 0.075 . LdBPK_190150.1 285 QKEIDSK|YA 0.068 . LdBPK_190150.1 294 TFPFAIR|NL 0.086 . LdBPK_190150.1 299 IRNLEAK|KA 0.098 . LdBPK_190150.1 300 RNLEAKK|AR 0.077 . LdBPK_190150.1 302 LEAKKAR|LG 0.094 . LdBPK_190150.1 310 GLNEMAK|HG 0.068 . LdBPK_190150.1 323 YPILFEK|EG 0.068 . LdBPK_190150.1 332 EVVAHFK|IT 0.060 . LdBPK_190150.1 340 TVLISNK|KI 0.067 . LdBPK_190150.1 341 VLISNKK|IE 0.069 . LdBPK_190150.1 349 EPITGLK|PQ 0.051 . LdBPK_190150.1 352 TGLKPQK|AP 0.061 . LdBPK_190150.1 369 MLLATNK|LS 0.055 . LdBPK_190150.1 376 LSLSLEK|KA 0.065 . LdBPK_190150.1 377 SLSLEKK|AA 0.151 . LdBPK_190150.1 380 LEKKAAK|-- 0.070 . ____________________________^_________________

  • Fasta :-

    >LdBPK_190150.1 ATGCCAAAGAACACCGACCAGGAGGAGTGGGAGGATTACGGCGACGAGGAGGTGCAGGAT GAGGAGGAGGAGGACACCACCATCAACAACTCCGACGTGGTGGTGCGCTACAAGAAGGCC GCCACGTGGTGCAATGAAACGTTGCGCGTGCTTATCGATGCCACAAAACCTGGCGCCAAG GTGTGCGACTTGTGCCGCCTCGGTGATGACACCATCACCGCCAAGGTCAAGACGATGTTC AAAGGCACGGAAAAAGGCATCGCCTTCCCCACCTGCATCTCGGTCAACAACTGCGTATGC CACAACAGCCCTGGAGTGTCAGACGAGGCGACGCAGCAAGAGATTGCGATGGGTGACGTC GTGCACTACGACCTGGGCATCCACGTGGACGGCTACTGCGCCGTCGTCGCGCACACCATT CAGGTGACAGAGGACAACGAGCTCGGCAAGGACGAGAAGGCGGCGCGGGTCATTACAGCG ACGTACAACATCCTGAACACGGCGCTGCGCCAGATGCGTCCCGGTGCGACCATCTACCAG GTGACAGACGTAGTTGAGAAGGCTGCGGAGCACTACAAGGTGACTCCGGTGGACGGCGTC CTTTCGCACATGATGAAGCGCTACATCATAGACGGATACCGTTGTATCCCGCAGCGCAGG GTCGCGGAGCACATGGTGCACGACTACGATCTCGAGAAGGCGCAGGTTTGGACGCTAGAC ATTGTTATGACCTCCGGCAAGGGCAAGCTTAAGGAGCGCGATGCGCGGCCGTGCGTGTTC AAGGTGGCTCTGGACTCCAACTACTCTGTGAAGATGGAAAGCGCGAAGGAGGTTCAGAAG GAAATCGACTCCAAGTATGCTACCTTCCCGTTTGCCATCCGCAACCTGGAGGCCAAGAAG GCCCGCCTCGGTCTCAACGAGATGGCGAAGCACGGCGCTGTCATCCCGTACCCTATTCTC TTCGAAAAAGAAGGCGAGGTCGTCGCCCATTTCAAGATTACGGTGCTCATCAGCAACAAG AAGATTGAGCCGATCACCGGCCTGAAGCCGCAGAAGGCCCCGGCGCTCGAGCCGTACACG GACGAGATGCTGCTTGCGACGAACAAGCTCTCGCTGTCGCTAGAGAAGAAGGCGGCAAAG TAG
  • Download Fasta

  • Fasta :-

    MPKNTDQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAK VCDLCRLGDDTITAKVKTMFKGTEKGIAFPTCISVNNCVCHNSPGVSDEATQQEIAMGDV VHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITATYNILNTALRQMRPGATIYQ VTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKK ARLGLNEMAKHGAVIPYPILFEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYT DEMLLATNKLSLSLEKKAAK

  • title: active site
  • coordinates: H101,D124,V135,K247,I315,K332
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India