LdBPK_190540.1 | metallo- peptidase, Clan MG, Family M24

_IDPredictionOTHERSPmTPCS_Position
LdBPK_190540.1OTHER0.9998700.0000060.000123
No Results

  • Fasta :-

    >LdBPK_190540.1 MPCEGCGVSEAGLQCPTCKKLSLPPSFFCTQDCFRAHWGTHKLKHTEMKNLPATIPTMTE VDERLFNFTGPLRPGKITPRRAVPKEIARPDYAERNDGVSESEEKDRGSHRVVAHNLKNL HEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGVTTDEIDRIVHEATIKRGMYP SPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSGCSVVRSYTGHGIGKFFH TAPNVCHYKDNKSPGLIKPGHVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTM VCTPEGVELLTDWKDGIPFYQKQLREWGIPIPAEDPSEIKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_190540.1.fa Sequence name : LdBPK_190540 Sequence length : 401 VALUES OF COMPUTED PARAMETERS Coef20 : 3.124 CoefTot : -0.253 ChDiff : -8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 1.353 0.089 0.479 MesoH : -0.884 0.161 -0.422 0.184 MuHd_075 : 18.317 8.504 5.039 3.330 MuHd_095 : 8.549 4.513 2.246 2.363 MuHd_100 : 12.562 5.775 1.252 2.701 MuHd_105 : 15.797 7.242 4.649 2.660 Hmax_075 : 12.600 11.500 5.193 3.690 Hmax_095 : 10.850 9.600 4.124 3.229 Hmax_100 : 10.400 9.000 2.454 2.930 Hmax_105 : 10.400 5.600 3.750 2.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9832 0.0168 DFMC : 0.9645 0.0355
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 401 LdBPK_190540.1 MPCEGCGVSEAGLQCPTCKKLSLPPSFFCTQDCFRAHWGTHKLKHTEMKNLPATIPTMTEVDERLFNFTGPLRPGKITPR 80 RAVPKEIARPDYAERNDGVSESEEKDRGSHRVVAHNLKNLHEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGV 160 TTDEIDRIVHEATIKRGMYPSPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP 240 DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSGCSVVRSYTGHGIGKFFHTAPNVCHYKDNKSPGLIKPG 320 HVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTMVCTPEGVELLTDWKDGIPFYQKQLREWGIPIPAEDPSEIK 400 I 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 . 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_190540.1 19 LQCPTCK|KL 0.065 . LdBPK_190540.1 20 QCPTCKK|LS 0.064 . LdBPK_190540.1 35 CTQDCFR|AH 0.077 . LdBPK_190540.1 42 AHWGTHK|LK 0.068 . LdBPK_190540.1 44 WGTHKLK|HT 0.071 . LdBPK_190540.1 49 LKHTEMK|NL 0.092 . LdBPK_190540.1 64 MTEVDER|LF 0.076 . LdBPK_190540.1 73 NFTGPLR|PG 0.064 . LdBPK_190540.1 76 GPLRPGK|IT 0.103 . LdBPK_190540.1 80 PGKITPR|RA 0.100 . LdBPK_190540.1 81 GKITPRR|AV 0.274 . LdBPK_190540.1 85 PRRAVPK|EI 0.077 . LdBPK_190540.1 89 VPKEIAR|PD 0.099 . LdBPK_190540.1 95 RPDYAER|ND 0.109 . LdBPK_190540.1 105 VSESEEK|DR 0.068 . LdBPK_190540.1 107 ESEEKDR|GS 0.121 . LdBPK_190540.1 111 KDRGSHR|VV 0.148 . LdBPK_190540.1 118 VVAHNLK|NL 0.061 . LdBPK_190540.1 130 YNNAELR|RS 0.144 . LdBPK_190540.1 131 NNAELRR|SS 0.236 . LdBPK_190540.1 137 RSSDILK|IK 0.064 . LdBPK_190540.1 139 SDILKIK|RV 0.075 . LdBPK_190540.1 140 DILKIKR|VN 0.105 . LdBPK_190540.1 146 RVNALSR|EV 0.137 . LdBPK_190540.1 157 IACAAVK|PG 0.056 . LdBPK_190540.1 167 TTDEIDR|IV 0.097 . LdBPK_190540.1 175 VHEATIK|RG 0.052 . LdBPK_190540.1 176 HEATIKR|GM 0.205 . LdBPK_190540.1 190 NYYNFPK|SV 0.149 . LdBPK_190540.1 208 HGIPDNR|PL 0.090 . LdBPK_190540.1 239 ETVFVGK|PD 0.069 . LdBPK_190540.1 246 PDEESVK|IV 0.083 . LdBPK_190540.1 263 AGISVVK|PD 0.060 . LdBPK_190540.1 269 KPDELYR|YI 0.155 . LdBPK_190540.1 278 GDAIEAR|AE 0.095 . LdBPK_190540.1 281 IEARAEK|SG 0.192 . LdBPK_190540.1 288 SGCSVVR|SY 0.173 . LdBPK_190540.1 297 TGHGIGK|FF 0.085 . LdBPK_190540.1 309 PNVCHYK|DN 0.068 . LdBPK_190540.1 312 CHYKDNK|SP 0.083 . LdBPK_190540.1 318 KSPGLIK|PG 0.057 . LdBPK_190540.1 348 NWTSATK|DG 0.058 . LdBPK_190540.1 351 SATKDGK|RT 0.076 . LdBPK_190540.1 352 ATKDGKR|TA 0.164 . LdBPK_190540.1 374 ELLTDWK|DG 0.058 . LdBPK_190540.1 382 GIPFYQK|QL 0.059 . LdBPK_190540.1 385 FYQKQLR|EW 0.121 . LdBPK_190540.1 400 EDPSEIK|I- 0.058 . ____________________________^_________________

  • Fasta :-

    >LdBPK_190540.1 ATGCCTTGCGAAGGCTGCGGCGTCAGTGAGGCCGGCCTGCAGTGCCCCACCTGCAAGAAA CTGAGCTTGCCGCCGAGCTTCTTCTGCACGCAGGACTGCTTCCGGGCGCATTGGGGAACG CACAAGCTGAAGCACACCGAGATGAAGAACCTGCCCGCCACGATCCCCACAATGACGGAG GTGGACGAGCGGCTCTTCAACTTCACGGGGCCACTCCGTCCTGGAAAAATCACGCCACGC CGTGCTGTGCCAAAGGAGATAGCGCGGCCAGACTACGCGGAGCGAAACGACGGCGTTTCC GAGTCGGAGGAGAAGGATCGAGGCAGCCACCGCGTCGTTGCACACAACCTCAAGAATTTG CACGAAGACTACAACAACGCCGAGCTGCGCCGGAGCTCCGACATCCTCAAGATCAAACGT GTGAATGCGCTCTCGCGTGAAGTTCTGGACATCGCCTGCGCGGCGGTGAAGCCGGGCGTC ACGACGGACGAAATTGACCGCATCGTCCACGAGGCGACGATCAAGCGCGGCATGTACCCA TCGCCGCTGAATTACTACAACTTCCCCAAGTCCGTCTGCACCAGCGTGAACGAGATCATC TGCCACGGCATTCCAGACAACCGCCCACTCGAGGAGGGCGACATAGTAAACATAGACGTC TCTTGCTACCTCGACGGCTTCCACGGCGATTTGAACGAAACGGTGTTTGTCGGCAAGCCA GACGAGGAAAGCGTGAAGATTGTGCACACGGCGTACGCCTGCATGATGGCCGGCATCAGC GTTGTGAAACCGGATGAACTCTACCGCTACATCGGTGACGCCATCGAGGCGCGGGCGGAG AAGTCGGGCTGCAGTGTAGTGCGCAGCTACACCGGGCATGGTATCGGCAAGTTCTTTCAC ACGGCACCGAACGTGTGCCATTACAAGGACAACAAAAGCCCCGGACTCATCAAGCCCGGG CACGTCTTCACAATTGAGCCGATGATCAACCTGGGTACGTGGCAGGATGTAACCTGGCCT GATAACTGGACGAGTGCAACGAAGGATGGCAAGCGCACCGCGCAGTTTGAGCACACGATG GTGTGCACACCAGAAGGGGTAGAGCTTCTGACAGACTGGAAGGACGGCATACCCTTTTAC CAGAAGCAGCTGAGGGAATGGGGCATTCCGATCCCCGCCGAAGACCCCAGCGAAATCAAA ATCTGA
  • Download Fasta

  • Fasta :-

    MPCEGCGVSEAGLQCPTCKKLSLPPSFFCTQDCFRAHWGTHKLKHTEMKNLPATIPTMTE VDERLFNFTGPLRPGKITPRRAVPKEIARPDYAERNDGVSESEEKDRGSHRVVAHNLKNL HEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGVTTDEIDRIVHEATIKRGMYP SPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSGCSVVRSYTGHGIGKFFH TAPNVCHYKDNKSPGLIKPGHVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTM VCTPEGVELLTDWKDGIPFYQKQLREWGIPIPAEDPSEIKI

  • title: active site
  • coordinates: H202,D219,D230,H293,E326,E357
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_190540.1100 SNDGVSESEE0.997unspLdBPK_190540.1102 SGVSESEEKD0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India