LdBPK_191460.1 | cysteine peptidase A (CBA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_191460.1SP0.0246200.9741230.001257CS pos: 22-23. CYG-SA. Pr: 0.3738
No Results

  • Fasta :-

    >LdBPK_191460.1 MARRNPFFFAIVVTILFVVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEG RRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHV HVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQV LVSCDNIDDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIA GYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNRQA KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATIDDSNTSHVPTTAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_191460.1.fa Sequence name : LdBPK_191460 Sequence length : 354 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : -0.140 ChDiff : -4 ZoneTo : 33 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.347 2.565 0.552 0.872 MesoH : -0.004 0.467 -0.245 0.338 MuHd_075 : 21.280 14.245 5.109 5.584 MuHd_095 : 14.294 13.225 3.435 2.859 MuHd_100 : 12.537 14.114 4.231 3.513 MuHd_105 : 13.774 14.387 4.424 4.493 Hmax_075 : 18.113 18.300 5.071 6.740 Hmax_095 : 15.488 26.800 5.216 6.947 Hmax_100 : 15.800 25.700 4.990 7.980 Hmax_105 : 13.388 22.600 5.444 6.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7904 0.2096 DFMC : 0.9166 0.0834
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 354 LdBPK_191460.1 MARRNPFFFAIVVTILFVVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHN 80 PHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFATTG 160 NIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIA 240 GYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGY 320 IRLAMGSNQCLLKNYAVTATIDDSNTSHVPTTAA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_191460.1 3 ----MAR|RN 0.075 . LdBPK_191460.1 4 ---MARR|NP 0.089 . LdBPK_191460.1 44 ASAHYGR|FK 0.112 . LdBPK_191460.1 46 AHYGRFK|KR 0.067 . LdBPK_191460.1 47 HYGRFKK|RH 0.317 . LdBPK_191460.1 48 YGRFKKR|HG 0.239 . LdBPK_191460.1 51 FKKRHGK|PF 0.160 . LdBPK_191460.1 61 EDAEEGR|RF 0.083 . LdBPK_191460.1 62 DAEEGRR|FN 0.106 . LdBPK_191460.1 67 RRFNAFK|QN 0.081 . LdBPK_191460.1 90 HYDVSGK|FA 0.076 . LdBPK_191460.1 101 TPQEFAK|LY 0.065 . LdBPK_191460.1 111 NPNYYAR|HG 0.116 . LdBPK_191460.1 114 YYARHGK|DY 0.220 . LdBPK_191460.1 117 RHGKDYK|EH 0.065 . LdBPK_191460.1 127 HVDDSVR|SG 0.101 . LdBPK_191460.1 136 VMSVDWR|EK 0.130 . LdBPK_191460.1 138 SVDWREK|GV 0.071 . LdBPK_191460.1 145 GVVTPVK|NQ 0.073 . LdBPK_191460.1 169 EGQWALK|NH 0.058 . LdBPK_191460.1 226 TSAGGTR|PP 0.105 . LdBPK_191460.1 238 NGTVGAK|IA 0.069 . LdBPK_191460.1 258 IAAYVGK|NG 0.066 . LdBPK_191460.1 298 LVVGFNR|QA 0.083 . LdBPK_191460.1 301 GFNRQAK|PP 0.165 . LdBPK_191460.1 308 PPYWIVK|NS 0.068 . LdBPK_191460.1 318 GSSWGEK|GY 0.076 . LdBPK_191460.1 322 GEKGYIR|LA 0.097 . LdBPK_191460.1 333 SNQCLLK|NY 0.059 . ____________________________^_________________

  • Fasta :-

    >LdBPK_191460.1 ATGGCGCGCCGCAACCCCTTTTTTTTTGCGATAGTGGTAACTATCCTGTTCGTGGTGTGC TACGGTTCCGCTCTTATCGCCCAGACACCTCTCGGCGTCGACGACTTCATTGCCTCGGCG CATTACGGACGCTTTAAGAAGCGCCACGGCAAGCCCTTCGGCGAGGACGCCGAGGAGGGT CGACGCTTCAACGCCTTCAAGCAGAACATGCAGACAGCCTACTTCCTCAATGCGCACAAC CCGCACGCGCACTACGACGTGTCCGGCAAGTTCGCGGACCTCACCCCGCAGGAGTTCGCC AAGTTGTACCTGAACCCCAACTACTACGCGCGCCACGGCAAGGATTACAAGGAGCACGTG CACGTCGACGACAGCGTCCGCAGTGGTGTGATGTCGGTGGACTGGCGTGAGAAGGGTGTC GTGACGCCGGTGAAGAACCAGGGAATGTGCGGCTCGTGCTGGGCCTTCGCCACCACTGGC AACATCGAAGGCCAGTGGGCTTTAAAAAACCACTCGCTGGTTTCGCTGTCGGAGCAAGTC CTCGTGTCGTGTGACAACATCGATGATGGGTGCAACGGCGGGCTGATGGAACAGGCAATG CAATGGATCATCAACGATCACAACGGCACTGTGCCCACGGAGGACAGCTACCCCTACACC TCTGCCGGCGGCACGAGGCCTCCGTGCCATGACAACGGCACCGTCGGCGCCAAAATAGCA GGTTACATGTCCCTGCCGCATGACGAGGAAGAGATCGCGGCTTATGTAGGGAAGAACGGC CCAGTCGCCGTCGCCGTCGACGCGACAACCTGGCAGCTGTACTTTGGCGGTGTGGTCACC CTCTGCTTCGGGTTGTCGCTCAACCACGGTGTGCTCGTTGTCGGCTTCAACAGACAAGCA AAACCGCCGTACTGGATCGTGAAGAACTCGTGGGGCTCCTCGTGGGGTGAGAAGGGGTAC ATCCGCCTTGCCATGGGCAGCAACCAGTGCTTGCTGAAGAATTACGCCGTGACGGCCACG ATTGACGACTCCAACACCTCACACGTGCCGACGACAGCGGCCTAG
  • Download Fasta

  • Fasta :-

    MARRNPFFFAIVVTILFVVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEG RRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHV HVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQV LVSCDNIDDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIA GYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNRQA KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATIDDSNTSHVPTTAA

  • title: active site
  • coordinates: Q147,C153,H289,N309
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India