LdBPK_201210.1 | calpain-like cysteine peptidase, putative (fragment)

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_201210.1OTHER0.9998970.0000470.000055
No Results

  • Fasta :-

    >LdBPK_201210.1 MSQDQLNDEAQWTEIEEEAPQERETPNTPDQAEDCNEAAPAEEQAEYCNEAAPAEEQAED CNEAAPAEEQAEGAADGPDQRQDLGSEEKPEPPFEETQQAEECPEDVVPLEASETQEHET PGA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_201210.1.fa Sequence name : LdBPK_201210 Sequence length : 123 VALUES OF COMPUTED PARAMETERS Coef20 : 2.734 CoefTot : -0.043 ChDiff : -38 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -1.476 -0.612 -0.658 0.045 MesoH : -2.944 -1.239 -0.989 -0.170 MuHd_075 : 34.347 21.421 8.811 5.363 MuHd_095 : 7.312 3.279 1.789 0.690 MuHd_100 : 15.676 5.654 3.652 2.077 MuHd_105 : 21.093 8.836 5.340 2.980 Hmax_075 : 3.150 5.833 -1.903 2.532 Hmax_095 : -9.537 -3.938 -5.140 -0.175 Hmax_100 : -13.400 -6.400 -6.010 -0.380 Hmax_105 : -11.550 -5.800 -6.010 0.233 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9762 0.0238 DFMC : 0.9531 0.0469
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 123 LdBPK_201210.1 MSQDQLNDEAQWTEIEEEAPQERETPNTPDQAEDCNEAAPAEEQAEYCNEAAPAEEQAEDCNEAAPAEEQAEGAADGPDQ 80 RQDLGSEEKPEPPFEETQQAEECPEDVVPLEASETQEHETPGA 160 ................................................................................ 80 ........................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_201210.1 23 EEAPQER|ET 0.086 . LdBPK_201210.1 81 ADGPDQR|QD 0.081 . LdBPK_201210.1 89 DLGSEEK|PE 0.061 . ____________________________^_________________

  • Fasta :-

    >LdBPK_201210.1 ATGTCTCAAGATCAGCTCAACGACGAGGCCCAGTGGACCGAGATCGAAGAGGAGGCACCA CAGGAGCGGGAAACCCCCAACACGCCTGACCAGGCTGAGGATTGCAACGAGGCCGCACCG GCAGAGGAGCAGGCTGAGTATTGCAACGAGGCCGCACCGGCAGAGGAGCAGGCTGAGGAT TGCAACGAGGCCGCACCGGCAGAGGAGCAGGCGGAGGGAGCCGCAGATGGACCTGACCAA CGTCAGGATCTGGGCAGTGAAGAGAAACCTGAACCGCCATTTGAGGAGACACAGCAGGCC GAAGAGTGCCCAGAGGATGTCGTCCCGCTTGAGGCTTCCGAGACTCAGGAGCACGAGACC CCTGGGGCC
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  • Fasta :-

    MSQDQLNDEAQWTEIEEEAPQERETPNTPDQAEDCNEAAPAEEQAEYCNEAAPAEEQAED CNEAAPAEEQAEGAADGPDQRQDLGSEEKPEPPFEETQQAEECPEDVVPLEASETQEHET PGA

    No Results
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IDSitePeptideScoreMethod
LdBPK_201210.186 SQDLGSEEKP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India