LdBPK_210960.1 | metallo-peptidase, Clan MG, Family M24

_IDPredictionOTHERSPmTPCS_Position
LdBPK_210960.1OTHER0.9999990.0000000.000001
No Results

  • Fasta :-

    >LdBPK_210960.1 MPPKMSAKNKQQPKQQGGNKKGKGSSQDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRS SNGNGTAPASRSLAADEPVVPSSADHPENPYPKTADGYPRQTWPEPTVLVSKQFAPGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLAYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_210960.1.fa Sequence name : LdBPK_210960 Sequence length : 465 VALUES OF COMPUTED PARAMETERS Coef20 : 2.515 CoefTot : -3.116 ChDiff : -3 ZoneTo : 27 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 0.900 -0.108 0.470 MesoH : -0.765 0.252 -0.445 0.206 MuHd_075 : 23.707 10.421 8.090 4.913 MuHd_095 : 20.588 10.882 7.582 4.105 MuHd_100 : 18.054 9.376 6.066 3.486 MuHd_105 : 18.353 6.695 5.637 2.635 Hmax_075 : -0.817 -8.283 -2.221 0.618 Hmax_095 : -12.900 -9.200 -5.975 -1.480 Hmax_100 : -4.300 -11.100 -4.527 -0.450 Hmax_105 : -9.800 -12.017 -5.534 -1.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9061 0.0939 DFMC : 0.7121 0.2879
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 465 LdBPK_210960.1 MPPKMSAKNKQQPKQQGGNKKGKGSSQDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRSSNGNGTAPASRSLAADEPVV 80 PSSADHPENPYPKTADGYPRQTWPEPTVLVSKQFAPGQFPAGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAE 160 VHRQVRTWAQSWIKPGLSLMLMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLAYDDVMKVDFG 240 THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEVEINGKVHQVKSIRNLSGHNI 320 APYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGFVNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTL 400 AFCRKWLDRDGFDRHLMNLNRLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_210960.1 4 ---MPPK|MS 0.067 . LdBPK_210960.1 8 PPKMSAK|NK 0.074 . LdBPK_210960.1 10 KMSAKNK|QQ 0.102 . LdBPK_210960.1 14 KNKQQPK|QQ 0.082 . LdBPK_210960.1 20 KQQGGNK|KG 0.058 . LdBPK_210960.1 21 QQGGNKK|GK 0.168 . LdBPK_210960.1 23 GGNKKGK|GS 0.128 . LdBPK_210960.1 44 AAVNASK|AD 0.063 . LdBPK_210960.1 49 SKADAAK|NH 0.072 . LdBPK_210960.1 58 SNNHQGK|RS 0.101 . LdBPK_210960.1 59 NNHQGKR|SS 0.428 . LdBPK_210960.1 71 GTAPASR|SL 0.154 . LdBPK_210960.1 93 PENPYPK|TA 0.089 . LdBPK_210960.1 100 TADGYPR|QT 0.125 . LdBPK_210960.1 112 PTVLVSK|QF 0.064 . LdBPK_210960.1 135 GEMNNFR|RS 0.109 . LdBPK_210960.1 136 EMNNFRR|SS 0.424 . LdBPK_210960.1 141 RRSSEEK|RA 0.074 . LdBPK_210960.1 142 RSSEEKR|AL 0.248 . LdBPK_210960.1 146 EKRALAR|AS 0.162 . LdBPK_210960.1 156 QQVQEMR|EA 0.108 . LdBPK_210960.1 163 EAAEVHR|QV 0.134 . LdBPK_210960.1 166 EVHRQVR|TW 0.308 . LdBPK_210960.1 174 WAQSWIK|PG 0.058 . LdBPK_210960.1 185 LMLMTDR|IE 0.068 . LdBPK_210960.1 188 MTDRIEK|KL 0.090 . LdBPK_210960.1 189 TDRIEKK|LN 0.124 . LdBPK_210960.1 196 LNELIGK|DG 0.065 . LdBPK_210960.1 201 GKDGILR|GQ 0.069 . LdBPK_210960.1 226 PNTGDEK|VV 0.063 . LdBPK_210960.1 236 AYDDVMK|VD 0.056 . LdBPK_210960.1 246 GTHINGR|II 0.115 . LdBPK_210960.1 268 PLLQAVK|EA 0.059 . LdBPK_210960.1 276 ATYEGIK|QA 0.064 . LdBPK_210960.1 283 QAGIDVR|LG 0.092 . LdBPK_210960.1 305 EVEINGK|VH 0.052 . LdBPK_210960.1 310 GKVHQVK|SI 0.097 . LdBPK_210960.1 313 HQVKSIR|NL 0.104 . LdBPK_210960.1 329 YIIHSGK|SV 0.127 . LdBPK_210960.1 335 KSVPIVK|GG 0.068 . LdBPK_210960.1 341 KGGEQTK|ME 0.072 . LdBPK_210960.1 358 TFGSTGR|GF 0.082 . LdBPK_210960.1 373 CSHYMMR|PG 0.086 . LdBPK_210960.1 382 AEVMQLR|SE 0.132 . LdBPK_210960.1 385 MQLRSEK|AQ 0.100 . LdBPK_210960.1 391 KAQQLLK|HI 0.073 . LdBPK_210960.1 395 LLKHIHK|SY 0.088 . LdBPK_210960.1 404 STLAFCR|KW 0.076 . LdBPK_210960.1 405 TLAFCRK|WL 0.106 . LdBPK_210960.1 409 CRKWLDR|DG 0.116 . LdBPK_210960.1 414 DRDGFDR|HL 0.095 . LdBPK_210960.1 421 HLMNLNR|LV 0.141 . LdBPK_210960.1 430 DEGAVNK|YP 0.057 . LdBPK_210960.1 438 PPLVDVK|GS 0.067 . LdBPK_210960.1 456 YLGPTAK|EI 0.066 . LdBPK_210960.1 461 AKEILSK|GS 0.076 . ____________________________^_________________

  • Fasta :-

    >LdBPK_210960.1 ATGCCACCAAAGATGTCTGCGAAAAACAAGCAGCAGCCCAAGCAGCAGGGCGGCAACAAG AAGGGCAAAGGCAGCAGCCAGGACGGCGACGACTTTGACGCGATGCTGGCGGCAGCCGTG AACGCGTCCAAGGCGGACGCGGCCAAAAACCACAGTAATAACCATCAGGGTAAGCGCAGC AGCAACGGGAATGGTACTGCACCGGCCAGTAGGAGCCTCGCCGCGGACGAGCCAGTGGTG CCGAGCTCGGCCGATCACCCGGAGAATCCCTACCCGAAGACGGCGGATGGCTATCCGCGG CAGACGTGGCCGGAGCCGACGGTGCTAGTGTCGAAGCAGTTTGCTCCTGGTCAGTTTCCG GCCGGCGAGATCGTCGACCACCCTGGTGAGATGAACAACTTCCGACGCAGCAGTGAGGAA AAGCGGGCGTTGGCCCGCGCGAGTGAGCAGCAGGTGCAGGAGATGCGCGAGGCGGCCGAG GTGCACCGCCAGGTCCGCACCTGGGCACAGAGCTGGATCAAGCCAGGCCTATCACTGATG CTCATGACCGATCGCATCGAGAAGAAGCTGAATGAGCTGATTGGCAAGGACGGCATCCTT CGGGGACAGGCTTTCCCGACAGGATGCTCGCTGAACCATGTCGCAGCGCACTACACACCC AACACCGGTGACGAAAAGGTCGTTTTGGCGTACGATGATGTCATGAAGGTCGACTTCGGC ACCCACATCAATGGCCGCATCATCGACTGCGCCTGGACGGTCGCCTTCAATCCGATGTTC GACCCGCTGCTGCAGGCCGTGAAAGAGGCGACGTACGAGGGCATCAAGCAGGCGGGCATT GACGTCCGTCTCGGCGACATCGGCGCCGCCATCGAGGAAGTGATGGAGTCGCACGAGGTG GAGATCAACGGCAAGGTGCACCAGGTAAAGAGCATCCGCAACTTGTCCGGCCACAACATT GCCCCCTACATCATCCATAGCGGCAAGAGTGTGCCCATCGTGAAAGGCGGCGAGCAGACG AAGATGGAGGAGGGGGAGGTGTTTGCCATCGAGACCTTCGGCTCCACTGGACGCGGCTTC GTGAACGAGGATTTGGAGTGCTCCCACTACATGATGCGGCCCGGCGCAGAGGTGATGCAG TTGCGCTCGGAGAAGGCGCAGCAGCTGCTGAAGCACATCCACAAGTCGTACAGCACGTTA GCGTTCTGCCGCAAATGGCTCGACCGCGACGGCTTCGATCGTCACCTCATGAACCTGAAC CGCCTGGTCGATGAGGGCGCCGTGAACAAGTACCCGCCGCTGGTGGACGTCAAGGGCAGC TATACAGCTCAATATGAACACACGATCTACCTCGGCCCAACCGCGAAGGAGATTCTTTCC AAGGGAAGCGACTACTAG
  • Download Fasta

  • Fasta :-

    MPPKMSAKNKQQPKQQGGNKKGKGSSQDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRS SNGNGTAPASRSLAADEPVVPSSADHPENPYPKTADGYPRQTWPEPTVLVSKQFAPGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLAYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY

  • title: active site
  • coordinates: H217,D238,D249,H318,E351,E446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_210960.1138 SFRRSSEEKR0.995unspLdBPK_210960.1138 SFRRSSEEKR0.995unspLdBPK_210960.1138 SFRRSSEEKR0.995unspLdBPK_210960.125 SKGKGSSQDG0.995unspLdBPK_210960.1137 SNFRRSSEEK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India