LdBPK_231120.1 | cytosolic leucyl aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
LdBPK_231120.1mTP0.0227340.0001630.977103CS pos: 41-42. HFL-TT. Pr: 0.1763
No Results

  • Fasta :-

    >LdBPK_231120.1 MLRRVLSRGPLPRSLSVGPAAKLTANRGKLAKSRGVHVHFLTTAECAAAAGDASAPIPPG FTGKAGEVDFQTLWATAQDPATAESALTKSGRKAAGARRIAEKPAELVAGMGAHSTVRDY RLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQRLKGHEMVEKTAIFAVTGAYQ YDRLKSGTLAPKDPAKTGSTRARRAESRAKPPAAPPPPMELVVASSNAQAVRAGEVIGHC VNDARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEGAGLHLMYNVGRGSR YEPYLMVLEYIGNPRSSATTAIVGKGVTFDCGGLNIKPYNSMETMHSDMMGAATAFCTLK AIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLTVEVLNTDAEGRLVLADVLTY VQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAILANSLMATGAQCGEELWPM PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKP KGYEPAGVTGFGVQLLVDFLRHNKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_231120.1.fa Sequence name : LdBPK_231120 Sequence length : 565 VALUES OF COMPUTED PARAMETERS Coef20 : 4.432 CoefTot : 0.107 ChDiff : 13 ZoneTo : 44 KR : 9 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.412 1.782 0.288 0.676 MesoH : 0.066 0.685 -0.217 0.312 MuHd_075 : 53.962 28.832 11.219 12.023 MuHd_095 : 22.518 12.760 7.514 4.940 MuHd_100 : 18.138 14.210 6.910 4.538 MuHd_105 : 23.268 18.498 8.739 5.755 Hmax_075 : 16.567 18.550 2.654 6.020 Hmax_095 : 10.400 10.300 -1.082 3.540 Hmax_100 : 0.800 5.600 -1.073 4.220 Hmax_105 : 10.850 10.200 1.759 3.649 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0170 0.9830 DFMC : 0.0261 0.9739 This protein is probably imported in mitochondria. f(Ser) = 0.0909 f(Arg) = 0.1364 CMi = 0.34843 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 565 LdBPK_231120.1 MLRRVLSRGPLPRSLSVGPAAKLTANRGKLAKSRGVHVHFLTTAECAAAAGDASAPIPPGFTGKAGEVDFQTLWATAQDP 80 ATAESALTKSGRKAAGARRIAEKPAELVAGMGAHSTVRDYRLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQR 160 LKGHEMVEKTAIFAVTGAYQYDRLKSGTLAPKDPAKTGSTRARRAESRAKPPAAPPPPMELVVASSNAQAVRAGEVIGHC 240 VNDARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEGAGLHLMYNVGRGSRYEPYLMVLEYIGNPRSSATT 320 AIVGKGVTFDCGGLNIKPYNSMETMHSDMMGAATAFCTLKAIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLT 400 VEVLNTDAEGRLVLADVLTYVQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAILANSLMATGAQCGEELWPM 480 PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKPKGYEPAGVTGFGVQLLVDFL 560 RHNKP 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_231120.1 3 ----MLR|RV 0.084 . LdBPK_231120.1 4 ---MLRR|VL 0.133 . LdBPK_231120.1 8 LRRVLSR|GP 0.090 . LdBPK_231120.1 13 SRGPLPR|SL 0.290 . LdBPK_231120.1 22 SVGPAAK|LT 0.061 . LdBPK_231120.1 27 AKLTANR|GK 0.087 . LdBPK_231120.1 29 LTANRGK|LA 0.074 . LdBPK_231120.1 32 NRGKLAK|SR 0.119 . LdBPK_231120.1 34 GKLAKSR|GV 0.183 . LdBPK_231120.1 64 PPGFTGK|AG 0.076 . LdBPK_231120.1 89 AESALTK|SG 0.092 . LdBPK_231120.1 92 ALTKSGR|KA 0.122 . LdBPK_231120.1 93 LTKSGRK|AA 0.097 . LdBPK_231120.1 98 RKAAGAR|RI 0.105 . LdBPK_231120.1 99 KAAGARR|IA 0.182 . LdBPK_231120.1 103 ARRIAEK|PA 0.094 . LdBPK_231120.1 118 GAHSTVR|DY 0.111 . LdBPK_231120.1 121 STVRDYR|LA 0.259 . LdBPK_231120.1 129 AVTAAVR|KA 0.074 . LdBPK_231120.1 130 VTAAVRK|AK 0.082 . LdBPK_231120.1 132 AAVRKAK|MC 0.212 . LdBPK_231120.1 145 VSLHPPK|QD 0.061 . LdBPK_231120.1 160 PYHPPQR|LK 0.105 . LdBPK_231120.1 162 HPPQRLK|GH 0.099 . LdBPK_231120.1 169 GHEMVEK|TA 0.073 . LdBPK_231120.1 183 GAYQYDR|LK 0.092 . LdBPK_231120.1 185 YQYDRLK|SG 0.067 . LdBPK_231120.1 192 SGTLAPK|DP 0.068 . LdBPK_231120.1 196 APKDPAK|TG 0.069 . LdBPK_231120.1 201 AKTGSTR|AR 0.085 . LdBPK_231120.1 203 TGSTRAR|RA 0.143 . LdBPK_231120.1 204 GSTRARR|AE 0.413 . LdBPK_231120.1 208 ARRAESR|AK 0.106 . LdBPK_231120.1 210 RAESRAK|PP 0.063 . LdBPK_231120.1 232 SNAQAVR|AG 0.133 . LdBPK_231120.1 245 HCVNDAR|NL 0.111 . LdBPK_231120.1 251 RNLGNLR|ED 0.078 . LdBPK_231120.1 265 FYAEWAK|KY 0.063 . LdBPK_231120.1 266 YAEWAKK|YM 0.122 . LdBPK_231120.1 274 MIPEGIK|VR 0.052 . LdBPK_231120.1 276 PEGIKVR|KV 0.122 . LdBPK_231120.1 277 EGIKVRK|VL 0.102 . LdBPK_231120.1 280 KVRKVLR|GQ 0.093 . LdBPK_231120.1 297 LMYNVGR|GS 0.101 . LdBPK_231120.1 300 NVGRGSR|YE 0.135 . LdBPK_231120.1 315 EYIGNPR|SS 0.095 . LdBPK_231120.1 325 TTAIVGK|GV 0.086 . LdBPK_231120.1 337 CGGLNIK|PY 0.065 . LdBPK_231120.1 360 TAFCTLK|AI 0.068 . LdBPK_231120.1 364 TLKAIAK|LQ 0.062 . LdBPK_231120.1 397 SIITSLK|GL 0.070 . LdBPK_231120.1 411 NTDAEGR|LV 0.094 . LdBPK_231120.1 423 VLTYVQK|YA 0.063 . LdBPK_231120.1 429 KYAPLDK|KP 0.061 . LdBPK_231120.1 430 YAPLDKK|PT 0.089 . LdBPK_231120.1 433 LDKKPTR|II 0.117 . LdBPK_231120.1 451 IVGLGSR|RA 0.079 . LdBPK_231120.1 452 VGLGSRR|AG 0.089 . LdBPK_231120.1 487 PIGDEHK|DM 0.081 . LdBPK_231120.1 491 EHKDMMK|GG 0.066 . LdBPK_231120.1 504 INAAPGR|QA 0.152 . LdBPK_231120.1 539 VADVGDK|PK 0.063 . LdBPK_231120.1 541 DVGDKPK|GY 0.093 . LdBPK_231120.1 561 LLVDFLR|HN 0.092 . LdBPK_231120.1 564 DFLRHNK|P- 0.096 . ____________________________^_________________

  • Fasta :-

    >LdBPK_231120.1 ATGCTGCGCCGCGTGCTGTCTCGCGGTCCACTCCCACGGTCGCTGTCGGTGGGCCCCGCG GCGAAGCTGACAGCGAACAGGGGCAAGCTCGCCAAGAGCCGTGGCGTTCATGTGCACTTT CTCACCACCGCTGAGTGTGCAGCGGCGGCCGGTGATGCTAGCGCCCCTATTCCGCCAGGC TTTACCGGCAAGGCAGGGGAGGTCGACTTCCAGACCCTCTGGGCGACCGCACAGGATCCG GCCACAGCGGAGAGCGCTCTGACGAAGAGTGGCCGAAAAGCAGCCGGGGCCAGGCGCATA GCGGAAAAGCCTGCCGAGCTCGTGGCGGGCATGGGGGCCCACTCCACGGTGCGGGATTAC CGCCTCGCGGTCACGGCCGCCGTGCGCAAAGCCAAGATGTGCAACGCCGCGTGGGTGTCG CTACACCCGCCGAAGCAAGATGTCTTTACCATGACGGACCCGTACCACCCGCCGCAGCGT CTGAAGGGCCACGAGATGGTGGAGAAAACCGCCATCTTTGCGGTGACGGGGGCTTACCAG TACGACCGCCTGAAATCGGGCACCCTCGCCCCCAAGGATCCTGCAAAGACGGGCAGCACC CGCGCGAGGCGGGCGGAGTCGCGGGCTAAGCCACCCGCCGCTCCACCGCCGCCGATGGAG CTTGTCGTGGCGTCGAGCAATGCACAGGCGGTGCGCGCGGGGGAGGTGATCGGGCACTGC GTCAACGACGCCCGGAACCTCGGCAACCTGCGCGAGGACGAAGGTGTGCCGGAGTTCTAT GCGGAGTGGGCGAAGAAATACATGATACCGGAGGGTATTAAGGTGCGCAAGGTGCTTCGC GGACAGCAGCTCGAGGGGGCGGGCTTGCACCTCATGTACAACGTCGGCCGCGGCTCCCGC TATGAGCCGTACCTGATGGTGCTTGAGTACATCGGCAATCCCCGCTCGAGCGCGACGACG GCCATCGTGGGCAAGGGCGTGACCTTCGACTGCGGCGGCCTGAACATCAAGCCCTATAAC TCGATGGAGACGATGCACAGCGACATGATGGGGGCGGCCACCGCGTTCTGCACTCTCAAG GCGATCGCGAAACTGCAGCTGCCTATCAACGTTGTGGCCGCGGTCGGACTCGTGGAGAAC GCCATCGGCCCCGAAAGTTATCACCCCTCCTCCATCATTACTAGCCTCAAGGGGCTCACG GTGGAGGTGCTCAACACTGACGCTGAGGGTCGCCTGGTACTGGCAGATGTGCTCACGTAC GTGCAGAAGTACGCACCGCTCGATAAGAAGCCTACCCGCATCATTGACCTTGCCACGCTC ACGGGTGCCATTATTGTCGGTCTCGGCTCGCGCCGCGCCGGGTTGTTTTCGCCATCTGCG ATACTGGCAAATTCACTAATGGCTACCGGCGCTCAGTGCGGGGAGGAGCTGTGGCCGATG CCGATCGGTGACGAGCACAAGGACATGATGAAGGGCGGCATTGCCGACTTGATCAATGCT GCCCCCGGCCGGCAGGCCGGCTCCTGCACCGCCGCCGCGTTCCTCTCCAACTTTGTAGAG CCGGAGGTGCAGTGGGCGCACCTCGATATCGCCGGCGTGGCAGATGTCGGCGACAAGCCC AAGGGCTACGAACCGGCTGGTGTGACGGGCTTCGGCGTGCAGCTTCTGGTCGACTTCCTG CGCCACAACAAGCCTTAA
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  • Fasta :-

    MLRRVLSRGPLPRSLSVGPAAKLTANRGKLAKSRGVHVHFLTTAECAAAAGDASAPIPPG FTGKAGEVDFQTLWATAQDPATAESALTKSGRKAAGARRIAEKPAELVAGMGAHSTVRDY RLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQRLKGHEMVEKTAIFAVTGAYQ YDRLKSGTLAPKDPAKTGSTRARRAESRAKPPAAPPPPMELVVASSNAQAVRAGEVIGHC VNDARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEGAGLHLMYNVGRGSR YEPYLMVLEYIGNPRSSATTAIVGKGVTFDCGGLNIKPYNSMETMHSDMMGAATAFCTLK AIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLTVEVLNTDAEGRLVLADVLTY VQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAILANSLMATGAQCGEELWPM PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKP KGYEPAGVTGFGVQLLVDFLRHNKP

  • title: Substrate-binding/catalytic site
  • coordinates: K325,D330,K337,D348,D407,E409,R411,L440
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_231120.1299 SVGRGSRYEP0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India