LdBPK_251870.1 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_251870.1SP0.0334190.9665280.000053CS pos: 19-20. CLG-AL. Pr: 0.6999
No Results

  • Fasta :-

    >LdBPK_251870.1 MNLVRVALLCACTTLLCLGALYYYSVYDYEKHMSMVQRKYSGYDPLTDCATPFGQLLGVA DDVPAYSNCNTKFSSTYINYVSLMDPMDNGRRGDPSETRIVMTAYRYTAFDYCMRWLVWN RGVMPRLVENTNQLWKTVDYFNPAKPEQGWSAEYITNYEEVTGMEERKFNAPRRADAIVY RMDKNTIPAGHIAVVVKVEDDVEAAGGPEKLKELKKMRLHPRRVYVAEQNWKNQPWGGHN YSRVLQFKWRAVAEKAYEGCYVDPDGLGIIGVVRVGKAMPLRAAPDPYQEALDMDNDGDL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_251870.1.fa Sequence name : LdBPK_251870 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 4.959 CoefTot : 0.512 ChDiff : -2 ZoneTo : 27 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.935 2.165 0.605 0.651 MesoH : -0.445 0.227 -0.257 0.186 MuHd_075 : 14.297 16.400 4.708 3.550 MuHd_095 : 18.713 12.564 3.431 5.436 MuHd_100 : 18.100 10.946 4.453 4.136 MuHd_105 : 16.894 7.125 5.399 2.768 Hmax_075 : 16.333 18.400 6.113 6.260 Hmax_095 : 15.750 19.775 4.823 6.318 Hmax_100 : 15.600 19.500 5.763 6.120 Hmax_105 : 16.450 19.900 6.412 5.451 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8723 0.1277 DFMC : 0.9241 0.0759
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 LdBPK_251870.1 MNLVRVALLCACTTLLCLGALYYYSVYDYEKHMSMVQRKYSGYDPLTDCATPFGQLLGVADDVPAYSNCNTKFSSTYINY 80 VSLMDPMDNGRRGDPSETRIVMTAYRYTAFDYCMRWLVWNRGVMPRLVENTNQLWKTVDYFNPAKPEQGWSAEYITNYEE 160 VTGMEERKFNAPRRADAIVYRMDKNTIPAGHIAVVVKVEDDVEAAGGPEKLKELKKMRLHPRRVYVAEQNWKNQPWGGHN 240 YSRVLQFKWRAVAEKAYEGCYVDPDGLGIIGVVRVGKAMPLRAAPDPYQEALDMDNDGDL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_251870.1 5 --MNLVR|VA 0.075 . LdBPK_251870.1 31 SVYDYEK|HM 0.068 . LdBPK_251870.1 38 HMSMVQR|KY 0.167 . LdBPK_251870.1 39 MSMVQRK|YS 0.138 . LdBPK_251870.1 72 YSNCNTK|FS 0.098 . LdBPK_251870.1 91 DPMDNGR|RG 0.097 . LdBPK_251870.1 92 PMDNGRR|GD 0.092 . LdBPK_251870.1 99 GDPSETR|IV 0.120 . LdBPK_251870.1 106 IVMTAYR|YT 0.090 . LdBPK_251870.1 115 AFDYCMR|WL 0.080 . LdBPK_251870.1 121 RWLVWNR|GV 0.131 . LdBPK_251870.1 126 NRGVMPR|LV 0.165 . LdBPK_251870.1 136 NTNQLWK|TV 0.075 . LdBPK_251870.1 145 DYFNPAK|PE 0.058 . LdBPK_251870.1 167 VTGMEER|KF 0.080 . LdBPK_251870.1 168 TGMEERK|FN 0.099 . LdBPK_251870.1 173 RKFNAPR|RA 0.145 . LdBPK_251870.1 174 KFNAPRR|AD 0.186 . LdBPK_251870.1 181 ADAIVYR|MD 0.102 . LdBPK_251870.1 184 IVYRMDK|NT 0.142 . LdBPK_251870.1 197 HIAVVVK|VE 0.085 . LdBPK_251870.1 210 AAGGPEK|LK 0.059 . LdBPK_251870.1 212 GGPEKLK|EL 0.066 . LdBPK_251870.1 215 EKLKELK|KM 0.056 . LdBPK_251870.1 216 KLKELKK|MR 0.086 . LdBPK_251870.1 218 KELKKMR|LH 0.073 . LdBPK_251870.1 222 KMRLHPR|RV 0.175 . LdBPK_251870.1 223 MRLHPRR|VY 0.183 . LdBPK_251870.1 232 VAEQNWK|NQ 0.062 . LdBPK_251870.1 243 GGHNYSR|VL 0.098 . LdBPK_251870.1 248 SRVLQFK|WR 0.081 . LdBPK_251870.1 250 VLQFKWR|AV 0.140 . LdBPK_251870.1 255 WRAVAEK|AY 0.084 . LdBPK_251870.1 274 GIIGVVR|VG 0.070 . LdBPK_251870.1 277 GVVRVGK|AM 0.086 . LdBPK_251870.1 282 GKAMPLR|AA 0.105 . ____________________________^_________________

  • Fasta :-

    >LdBPK_251870.1 ATGAACCTTGTGCGCGTCGCGCTGCTCTGTGCGTGCACGACGCTGCTGTGCCTCGGTGCC CTCTACTACTACTCCGTGTACGACTACGAGAAACACATGAGCATGGTGCAACGCAAGTAC TCGGGCTACGATCCGCTGACAGATTGTGCAACGCCGTTCGGGCAGCTCCTCGGTGTCGCC GACGACGTTCCGGCGTACAGCAACTGCAATACCAAGTTTTCCTCAACCTACATCAACTAC GTGAGCCTCATGGACCCAATGGACAACGGCCGCCGCGGCGACCCATCCGAGACGCGCATT GTCATGACTGCCTACCGCTACACCGCGTTCGACTACTGCATGCGGTGGCTCGTGTGGAAC CGCGGGGTCATGCCGCGCCTCGTCGAGAACACGAATCAGCTGTGGAAGACGGTGGACTAC TTCAACCCTGCCAAACCGGAGCAGGGCTGGTCTGCGGAGTACATCACCAACTACGAGGAG GTGACGGGCATGGAGGAGCGCAAGTTCAACGCGCCGCGGAGGGCGGACGCGATCGTCTAC CGCATGGACAAGAACACCATTCCTGCAGGTCACATCGCGGTGGTGGTGAAGGTGGAGGAC GACGTCGAAGCGGCCGGCGGCCCAGAGAAGCTGAAAGAGCTGAAGAAGATGCGCCTGCAT CCTCGCCGTGTCTACGTAGCAGAGCAAAACTGGAAGAATCAGCCGTGGGGTGGGCACAAC TACAGCCGCGTGCTGCAGTTCAAATGGCGCGCCGTAGCAGAGAAGGCATACGAGGGCTGT TACGTCGACCCCGACGGGCTTGGTATCATCGGCGTTGTGCGCGTGGGGAAGGCGATGCCC CTGCGTGCGGCGCCTGACCCCTACCAAGAGGCGCTCGACATGGATAACGACGGCGACCTC TAA
  • Download Fasta

  • Fasta :-

    MNLVRVALLCACTTLLCLGALYYYSVYDYEKHMSMVQRKYSGYDPLTDCATPFGQLLGVA DDVPAYSNCNTKFSSTYINYVSLMDPMDNGRRGDPSETRIVMTAYRYTAFDYCMRWLVWN RGVMPRLVENTNQLWKTVDYFNPAKPEQGWSAEYITNYEEVTGMEERKFNAPRRADAIVY RMDKNTIPAGHIAVVVKVEDDVEAAGGPEKLKELKKMRLHPRRVYVAEQNWKNQPWGGHN YSRVLQFKWRAVAEKAYEGCYVDPDGLGIIGVVRVGKAMPLRAAPDPYQEALDMDNDGDL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_251870.141 SQRKYSGYDP0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India