LdBPK_270040.1 | metallo- peptidase, Clan M- Family M48

_IDPredictionOTHERSPmTPCS_Position
LdBPK_270040.1OTHER0.9856140.0060420.008344
No Results

  • Fasta :-

    >LdBPK_270040.1 MSSSPNLFLRAAVVSLNVIGMWDAYLVLRQRRANQTKEMPSYFRKDITDEEFAKAQAYEG EKSTFSFLQHLKGLVITNMGIFLRLPAFLYYLVAQRASLSTGSFSHNYAAAVAGELISVV LDIPFSFYENFHIEDRHGFNEMTKTEFVKDIVKTLLLRVTLLYPLQIKLIQFVVQRFGER FPLYLFLGMSVMLVVFLLAMPTVIQPLFNKFTPLDAESTLYKKIELLSKEMSFPLKKVFV VDGSRRSHHSNAYFYGFGSNKRIVLYDTILEQLRDDDESIIAVLCHELGHWKHNHIYVNL AMALGQLMLISYGARLVVFDKRVYEAFGFGEVDPVIGLNIFAEMFYEPLSTFIGYGFCYV SRRHEFQADRFAVTHNRGEGMKKALLVISKENRASLTPDPLYSALHYTHPPVLERLQAID AELKKRE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_270040.1.fa Sequence name : LdBPK_270040 Sequence length : 427 VALUES OF COMPUTED PARAMETERS Coef20 : 4.572 CoefTot : 0.439 ChDiff : 3 ZoneTo : 37 KR : 5 DE : 1 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.494 2.594 0.409 0.868 MesoH : 0.214 1.028 -0.200 0.387 MuHd_075 : 19.344 15.704 4.828 5.178 MuHd_095 : 26.526 13.639 6.781 5.477 MuHd_100 : 26.731 13.940 6.943 5.825 MuHd_105 : 30.152 13.088 6.436 5.545 Hmax_075 : 18.000 22.900 4.065 8.167 Hmax_095 : 14.700 14.788 2.578 5.110 Hmax_100 : 15.300 15.700 2.771 5.360 Hmax_105 : 19.483 21.817 3.378 6.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8081 0.1919 DFMC : 0.6669 0.3331
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 427 LdBPK_270040.1 MSSSPNLFLRAAVVSLNVIGMWDAYLVLRQRRANQTKEMPSYFRKDITDEEFAKAQAYEGEKSTFSFLQHLKGLVITNMG 80 IFLRLPAFLYYLVAQRASLSTGSFSHNYAAAVAGELISVVLDIPFSFYENFHIEDRHGFNEMTKTEFVKDIVKTLLLRVT 160 LLYPLQIKLIQFVVQRFGERFPLYLFLGMSVMLVVFLLAMPTVIQPLFNKFTPLDAESTLYKKIELLSKEMSFPLKKVFV 240 VDGSRRSHHSNAYFYGFGSNKRIVLYDTILEQLRDDDESIIAVLCHELGHWKHNHIYVNLAMALGQLMLISYGARLVVFD 320 KRVYEAFGFGEVDPVIGLNIFAEMFYEPLSTFIGYGFCYVSRRHEFQADRFAVTHNRGEGMKKALLVISKENRASLTPDP 400 LYSALHYTHPPVLERLQAIDAELKKRE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_270040.1 10 SPNLFLR|AA 0.158 . LdBPK_270040.1 29 DAYLVLR|QR 0.081 . LdBPK_270040.1 31 YLVLRQR|RA 0.084 . LdBPK_270040.1 32 LVLRQRR|AN 0.476 . LdBPK_270040.1 37 RRANQTK|EM 0.070 . LdBPK_270040.1 44 EMPSYFR|KD 0.074 . LdBPK_270040.1 45 MPSYFRK|DI 0.312 . LdBPK_270040.1 54 TDEEFAK|AQ 0.068 . LdBPK_270040.1 62 QAYEGEK|ST 0.076 . LdBPK_270040.1 72 SFLQHLK|GL 0.063 . LdBPK_270040.1 84 NMGIFLR|LP 0.066 . LdBPK_270040.1 96 YYLVAQR|AS 0.065 . LdBPK_270040.1 136 NFHIEDR|HG 0.082 . LdBPK_270040.1 144 GFNEMTK|TE 0.062 . LdBPK_270040.1 149 TKTEFVK|DI 0.079 . LdBPK_270040.1 153 FVKDIVK|TL 0.051 . LdBPK_270040.1 158 VKTLLLR|VT 0.064 . LdBPK_270040.1 168 LYPLQIK|LI 0.058 . LdBPK_270040.1 176 IQFVVQR|FG 0.092 . LdBPK_270040.1 180 VQRFGER|FP 0.074 . LdBPK_270040.1 210 IQPLFNK|FT 0.059 . LdBPK_270040.1 222 AESTLYK|KI 0.068 . LdBPK_270040.1 223 ESTLYKK|IE 0.066 . LdBPK_270040.1 229 KIELLSK|EM 0.059 . LdBPK_270040.1 236 EMSFPLK|KV 0.093 . LdBPK_270040.1 237 MSFPLKK|VF 0.073 . LdBPK_270040.1 245 FVVDGSR|RS 0.067 . LdBPK_270040.1 246 VVDGSRR|SH 0.166 . LdBPK_270040.1 261 YGFGSNK|RI 0.056 . LdBPK_270040.1 262 GFGSNKR|IV 0.150 . LdBPK_270040.1 274 TILEQLR|DD 0.100 . LdBPK_270040.1 292 HELGHWK|HN 0.067 . LdBPK_270040.1 315 LISYGAR|LV 0.095 . LdBPK_270040.1 321 RLVVFDK|RV 0.079 . LdBPK_270040.1 322 LVVFDKR|VY 0.185 . LdBPK_270040.1 362 GFCYVSR|RH 0.081 . LdBPK_270040.1 363 FCYVSRR|HE 0.159 . LdBPK_270040.1 370 HEFQADR|FA 0.104 . LdBPK_270040.1 377 FAVTHNR|GE 0.095 . LdBPK_270040.1 382 NRGEGMK|KA 0.067 . LdBPK_270040.1 383 RGEGMKK|AL 0.094 . LdBPK_270040.1 390 ALLVISK|EN 0.064 . LdBPK_270040.1 393 VISKENR|AS 0.085 . LdBPK_270040.1 415 HPPVLER|LQ 0.068 . LdBPK_270040.1 424 AIDAELK|KR 0.056 . LdBPK_270040.1 425 IDAELKK|RE 0.082 . LdBPK_270040.1 426 DAELKKR|E- 0.172 . ____________________________^_________________

  • Fasta :-

    >LdBPK_270040.1 ATGTCATCCTCACCGAATCTCTTTCTGCGAGCGGCTGTCGTATCGCTCAATGTGATTGGC ATGTGGGATGCCTACCTCGTGCTGCGCCAGCGCCGCGCTAACCAAACCAAGGAGATGCCA TCGTATTTCAGGAAGGACATCACGGATGAGGAGTTTGCGAAGGCGCAGGCGTACGAGGGC GAGAAGAGCACGTTCAGTTTCCTCCAGCATCTGAAGGGACTCGTGATAACCAACATGGGT ATTTTTCTGCGCCTCCCCGCGTTCCTGTACTACCTTGTTGCGCAGCGCGCGAGCTTGTCT ACCGGCTCCTTTTCTCATAACTACGCCGCCGCCGTAGCCGGGGAGTTGATCTCCGTCGTA CTCGACATCCCCTTCTCCTTCTACGAGAACTTCCACATTGAGGACCGGCACGGCTTCAAC GAGATGACCAAGACAGAGTTCGTAAAGGATATTGTGAAAACGCTGCTTCTCCGCGTCACG CTGCTGTACCCTCTGCAGATCAAGCTCATCCAATTTGTGGTGCAACGCTTTGGCGAGCGC TTTCCGTTATACCTCTTCTTAGGAATGTCTGTGATGCTGGTTGTGTTTCTCCTGGCAATG CCAACGGTTATCCAGCCGCTGTTCAACAAGTTTACCCCGCTCGACGCGGAGTCGACCCTG TACAAGAAGATTGAACTCCTCAGCAAGGAGATGAGCTTCCCGCTGAAGAAGGTCTTCGTC GTCGATGGCAGCCGCCGCTCGCACCACAGCAACGCCTACTTCTACGGCTTTGGCAGCAAC AAACGCATCGTCCTCTACGACACCATTCTAGAGCAGCTGAGGGACGACGACGAGTCCATC ATTGCGGTGCTCTGCCACGAGCTTGGCCATTGGAAGCACAACCACATCTACGTGAACCTT GCCATGGCCCTTGGCCAGCTCATGCTGATATCCTACGGTGCACGCCTGGTCGTCTTCGAC AAGAGGGTCTATGAAGCGTTTGGCTTCGGTGAGGTGGATCCGGTGATCGGGCTTAACATC TTCGCTGAGATGTTCTACGAGCCCCTGAGTACGTTTATCGGATACGGGTTCTGCTACGTT TCGCGGCGGCACGAGTTTCAAGCGGACCGCTTCGCCGTGACGCACAATCGTGGTGAGGGA ATGAAGAAGGCCCTCTTGGTGATCAGCAAGGAAAACCGGGCCAGCCTAACACCGGATCCG CTGTACTCGGCGCTCCACTACACGCACCCGCCCGTGCTCGAGCGCTTGCAGGCGATTGAC GCGGAGCTCAAGAAGCGGGAATAG
  • Download Fasta

  • Fasta :-

    MSSSPNLFLRAAVVSLNVIGMWDAYLVLRQRRANQTKEMPSYFRKDITDEEFAKAQAYEG EKSTFSFLQHLKGLVITNMGIFLRLPAFLYYLVAQRASLSTGSFSHNYAAAVAGELISVV LDIPFSFYENFHIEDRHGFNEMTKTEFVKDIVKTLLLRVTLLYPLQIKLIQFVVQRFGER FPLYLFLGMSVMLVVFLLAMPTVIQPLFNKFTPLDAESTLYKKIELLSKEMSFPLKKVFV VDGSRRSHHSNAYFYGFGSNKRIVLYDTILEQLRDDDESIIAVLCHELGHWKHNHIYVNL AMALGQLMLISYGARLVVFDKRVYEAFGFGEVDPVIGLNIFAEMFYEPLSTFIGYGFCYV SRRHEFQADRFAVTHNRGEGMKKALLVISKENRASLTPDPLYSALHYTHPPVLERLQAID AELKKRE

    No Results
  • title: Zn binding site
  • coordinates: H286,H290,E365,H409
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_270040.1247 SGSRRSHHSN0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India