LdBPK_290990.1 | signal peptide peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_290990.1OTHER0.9999910.0000010.000008
No Results

  • Fasta :-

    >LdBPK_290990.1 MMKGKSDIALQTDEALSMPLNGSVMLFSLYVSLRFIPKEYFNILISFYLSLISVFALHML VKGYIKPNIVTGLICVGTGCASFFAQNWIASNILAFSIAVTALERLPVNGFTTSFILLIG LFFYDIFWVFGSDVMLMVATGIDGPIKLVFPQTIFGDCSKKSLLGLGDIIVPGLFICQTL VFSKDYVRRGSLYFATSMVAYTLSLVNTMAVMLIFQHGQPALLFIVPWLLVTFSAVAVYN GDVKAAWSFDILSVFTTSLEKPARGEPHAEQEVSLSAFVCEAVLDLFGFAKEEAPAESET AEESKKKKEA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_290990.1.fa Sequence name : LdBPK_290990 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 3.634 CoefTot : -0.364 ChDiff : -5 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.282 2.453 0.541 0.925 MesoH : 1.111 1.350 0.091 0.556 MuHd_075 : 12.963 5.406 2.396 1.305 MuHd_095 : 18.216 10.743 5.474 3.255 MuHd_100 : 23.789 13.527 6.051 3.958 MuHd_105 : 24.714 13.088 5.391 3.637 Hmax_075 : -1.137 2.217 -3.100 1.750 Hmax_095 : 9.000 7.400 0.260 3.340 Hmax_100 : 9.600 9.300 -0.227 2.880 Hmax_105 : 5.500 9.200 -0.815 2.830 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9543 0.0457 DFMC : 0.9403 0.0597
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 LdBPK_290990.1 MMKGKSDIALQTDEALSMPLNGSVMLFSLYVSLRFIPKEYFNILISFYLSLISVFALHMLVKGYIKPNIVTGLICVGTGC 80 ASFFAQNWIASNILAFSIAVTALERLPVNGFTTSFILLIGLFFYDIFWVFGSDVMLMVATGIDGPIKLVFPQTIFGDCSK 160 KSLLGLGDIIVPGLFICQTLVFSKDYVRRGSLYFATSMVAYTLSLVNTMAVMLIFQHGQPALLFIVPWLLVTFSAVAVYN 240 GDVKAAWSFDILSVFTTSLEKPARGEPHAEQEVSLSAFVCEAVLDLFGFAKEEAPAESETAEESKKKKEA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_290990.1 3 ----MMK|GK 0.079 . LdBPK_290990.1 5 --MMKGK|SD 0.103 . LdBPK_290990.1 34 SLYVSLR|FI 0.126 . LdBPK_290990.1 38 SLRFIPK|EY 0.076 . LdBPK_290990.1 62 ALHMLVK|GY 0.066 . LdBPK_290990.1 66 LVKGYIK|PN 0.058 . LdBPK_290990.1 105 AVTALER|LP 0.069 . LdBPK_290990.1 147 GIDGPIK|LV 0.075 . LdBPK_290990.1 160 IFGDCSK|KS 0.061 . LdBPK_290990.1 161 FGDCSKK|SL 0.128 . LdBPK_290990.1 184 QTLVFSK|DY 0.062 . LdBPK_290990.1 188 FSKDYVR|RG 0.073 . LdBPK_290990.1 189 SKDYVRR|GS 0.145 . LdBPK_290990.1 244 VYNGDVK|AA 0.062 . LdBPK_290990.1 261 FTTSLEK|PA 0.060 . LdBPK_290990.1 264 SLEKPAR|GE 0.119 . LdBPK_290990.1 291 DLFGFAK|EE 0.070 . LdBPK_290990.1 305 ETAEESK|KK 0.064 . LdBPK_290990.1 306 TAEESKK|KK 0.116 . LdBPK_290990.1 307 AEESKKK|KE 0.094 . LdBPK_290990.1 308 EESKKKK|EA 0.199 . ____________________________^_________________

  • Fasta :-

    >LdBPK_290990.1 ATGATGAAAGGGAAATCTGACATCGCACTCCAAACAGACGAGGCGCTGTCAATGCCTTTG AATGGCTCTGTCATGCTGTTTTCGTTGTACGTTTCCTTGCGCTTTATTCCTAAGGAATAC TTCAACATCCTGATTTCCTTCTATCTTAGCTTGATTAGCGTCTTCGCTCTTCACATGCTC GTGAAAGGGTATATCAAGCCCAATATTGTCACCGGACTGATCTGCGTAGGAACCGGGTGC GCCAGCTTTTTTGCTCAGAACTGGATCGCAAGCAACATACTGGCCTTTTCTATCGCCGTC ACAGCTCTTGAAAGGCTTCCTGTGAATGGGTTCACGACCTCTTTCATTCTGCTGATTGGC CTCTTCTTCTACGACATTTTCTGGGTTTTTGGGTCGGACGTCATGCTGATGGTGGCGACC GGCATTGACGGACCAATAAAACTCGTGTTTCCTCAGACGATCTTTGGCGACTGCTCCAAG AAAAGCCTCCTTGGACTCGGTGACATCATTGTGCCTGGCCTTTTTATATGCCAAACGCTG GTGTTCTCGAAGGACTATGTGAGGAGGGGAAGCCTGTACTTTGCCACGTCGATGGTCGCG TACACTCTGAGTCTTGTGAACACTATGGCTGTTATGCTGATTTTCCAACATGGCCAGCCA GCGCTCCTCTTCATCGTACCATGGCTTCTCGTCACATTCTCTGCTGTCGCCGTGTACAAC GGGGATGTCAAGGCGGCATGGAGCTTTGATATACTTAGTGTCTTCACAACCTCTTTAGAG AAGCCAGCGCGGGGTGAGCCGCATGCAGAACAGGAGGTATCCCTCTCCGCGTTTGTCTGC GAAGCTGTTTTGGATCTTTTCGGATTCGCAAAGGAGGAGGCGCCGGCGGAGAGCGAGACG GCGGAGGAGTCGAAGAAGAAGAAGGAGGCGTAG
  • Download Fasta

  • Fasta :-

    MMKGKSDIALQTDEALSMPLNGSVMLFSLYVSLRFIPKEYFNILISFYLSLISVFALHML VKGYIKPNIVTGLICVGTGCASFFAQNWIASNILAFSIAVTALERLPVNGFTTSFILLIG LFFYDIFWVFGSDVMLMVATGIDGPIKLVFPQTIFGDCSKKSLLGLGDIIVPGLFICQTL VFSKDYVRRGSLYFATSMVAYTLSLVNTMAVMLIFQHGQPALLFIVPWLLVTFSAVAVYN GDVKAAWSFDILSVFTTSLEKPARGEPHAEQEVSLSAFVCEAVLDLFGFAKEEAPAESET AEESKKKKEA

    No Results
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IDSitePeptideScoreMethod
LdBPK_290990.1191 SVRRGSLYFA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India