LdBPK_301440.1 | amidohydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_301440.1OTHER0.9521220.0137950.034083
No Results

  • Fasta :-

    >LdBPK_301440.1 MNAYADVYRARSVYPLSILLTHVPRNSPPPHIPPPYLSHKIMPVPFQQLMCEVRATADET IKWRRYIHQYPELSFKEFRTAAFVAETLRSFGCPALAVTHPVPTAVVANLTGGAGDGPIV ALRADMDALPGDEETDLPFKSQNTGAMHACGHDAHTAMLLSAAKVICAHQADIKGSVRFI FQHAEELLPGGAKDLVAAGVMEGVKSIFGMHCSPRYEAGTVGLMPGINTSYTDFFKLIIR GRGGHASTPQLLVDPVPITAEIVMAIQTITARKIDPRVVPVVSITTMTTGPNESHNVIPN EVKLMGTVRSRHKAVREQVPRDIERIASNIAAAHGAAATLDFTFGYDCCDNDPEVTAQVR CIGERILGSANIIDPKVPLYGGEDFSAYQLEKPGCFLWLGTANKSQGICEMCHSTKFRVD ETALPIGVSFHVGYVYDNVMA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_301440.1.fa Sequence name : LdBPK_301440 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 4.363 CoefTot : -2.918 ChDiff : -5 ZoneTo : 51 KR : 4 DE : 1 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.382 1.459 0.176 0.546 MesoH : -0.149 0.472 -0.248 0.270 MuHd_075 : 35.364 25.179 10.948 7.592 MuHd_095 : 26.635 16.929 7.533 5.264 MuHd_100 : 34.135 21.580 9.097 7.190 MuHd_105 : 31.954 22.649 8.215 7.535 Hmax_075 : 12.600 10.267 1.586 5.200 Hmax_095 : 10.325 12.000 1.999 3.745 Hmax_100 : 14.800 18.200 3.073 5.140 Hmax_105 : 13.600 16.800 2.858 4.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6858 0.3142 DFMC : 0.6666 0.3334
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 LdBPK_301440.1 MNAYADVYRARSVYPLSILLTHVPRNSPPPHIPPPYLSHKIMPVPFQQLMCEVRATADETIKWRRYIHQYPELSFKEFRT 80 AAFVAETLRSFGCPALAVTHPVPTAVVANLTGGAGDGPIVALRADMDALPGDEETDLPFKSQNTGAMHACGHDAHTAMLL 160 SAAKVICAHQADIKGSVRFIFQHAEELLPGGAKDLVAAGVMEGVKSIFGMHCSPRYEAGTVGLMPGINTSYTDFFKLIIR 240 GRGGHASTPQLLVDPVPITAEIVMAIQTITARKIDPRVVPVVSITTMTTGPNESHNVIPNEVKLMGTVRSRHKAVREQVP 320 RDIERIASNIAAAHGAAATLDFTFGYDCCDNDPEVTAQVRCIGERILGSANIIDPKVPLYGGEDFSAYQLEKPGCFLWLG 400 TANKSQGICEMCHSTKFRVDETALPIGVSFHVGYVYDNVMA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_301440.1 9 AYADVYR|AR 0.096 . LdBPK_301440.1 11 ADVYRAR|SV 0.194 . LdBPK_301440.1 25 LLTHVPR|NS 0.072 . LdBPK_301440.1 40 PPYLSHK|IM 0.065 . LdBPK_301440.1 54 QLMCEVR|AT 0.096 . LdBPK_301440.1 62 TADETIK|WR 0.058 . LdBPK_301440.1 64 DETIKWR|RY 0.086 . LdBPK_301440.1 65 ETIKWRR|YI 0.242 . LdBPK_301440.1 76 YPELSFK|EF 0.067 . LdBPK_301440.1 79 LSFKEFR|TA 0.109 . LdBPK_301440.1 89 FVAETLR|SF 0.105 . LdBPK_301440.1 123 GPIVALR|AD 0.123 . LdBPK_301440.1 140 ETDLPFK|SQ 0.076 . LdBPK_301440.1 164 MLLSAAK|VI 0.066 . LdBPK_301440.1 174 AHQADIK|GS 0.064 . LdBPK_301440.1 178 DIKGSVR|FI 0.107 . LdBPK_301440.1 193 LLPGGAK|DL 0.079 . LdBPK_301440.1 205 GVMEGVK|SI 0.077 . LdBPK_301440.1 215 GMHCSPR|YE 0.112 . LdBPK_301440.1 236 SYTDFFK|LI 0.070 . LdBPK_301440.1 240 FFKLIIR|GR 0.086 . LdBPK_301440.1 242 KLIIRGR|GG 0.124 . LdBPK_301440.1 272 IQTITAR|KI 0.091 . LdBPK_301440.1 273 QTITARK|ID 0.076 . LdBPK_301440.1 277 ARKIDPR|VV 0.123 . LdBPK_301440.1 303 VIPNEVK|LM 0.066 . LdBPK_301440.1 309 KLMGTVR|SR 0.153 . LdBPK_301440.1 311 MGTVRSR|HK 0.083 . LdBPK_301440.1 313 TVRSRHK|AV 0.091 . LdBPK_301440.1 316 SRHKAVR|EQ 0.097 . LdBPK_301440.1 321 VREQVPR|DI 0.159 . LdBPK_301440.1 325 VPRDIER|IA 0.133 . LdBPK_301440.1 360 EVTAQVR|CI 0.096 . LdBPK_301440.1 365 VRCIGER|IL 0.100 . LdBPK_301440.1 376 ANIIDPK|VP 0.060 . LdBPK_301440.1 392 SAYQLEK|PG 0.057 . LdBPK_301440.1 404 WLGTANK|SQ 0.102 . LdBPK_301440.1 416 EMCHSTK|FR 0.066 . LdBPK_301440.1 418 CHSTKFR|VD 0.181 . ____________________________^_________________

  • Fasta :-

    >LdBPK_301440.1 ATGAACGCATACGCAGACGTCTACCGCGCGCGATCGGTTTACCCGCTTTCCATTCTCTTA ACACACGTGCCTCGCAACAGCCCTCCTCCCCACATACCTCCACCTTATCTTTCCCACAAA ATCATGCCTGTGCCGTTTCAACAGCTGATGTGTGAGGTGCGCGCGACCGCAGACGAGACG ATCAAGTGGCGCCGCTACATTCACCAGTACCCGGAGCTGTCGTTCAAGGAGTTCAGGACG GCGGCGTTTGTTGCGGAAACGCTGCGGAGCTTCGGCTGCCCCGCGCTGGCCGTCACACAC CCGGTGCCGACGGCTGTTGTGGCGAACCTCACTGGCGGCGCTGGTGACGGGCCGATAGTG GCGCTGCGCGCCGACATGGACGCGCTGCCGGGGGACGAGGAGACGGATTTGCCTTTCAAG TCGCAGAACACGGGTGCGATGCACGCGTGCGGGCACGACGCGCACACTGCGATGCTGCTT AGCGCTGCAAAGGTGATCTGCGCGCATCAGGCGGACATTAAGGGTAGCGTGCGGTTCATT TTCCAGCACGCGGAGGAGCTGCTGCCCGGCGGCGCGAAGGACCTTGTTGCTGCCGGCGTG ATGGAGGGCGTGAAGAGCATCTTCGGCATGCATTGCTCACCGCGGTACGAGGCGGGCACT GTTGGTCTGATGCCCGGCATCAACACAAGCTACACGGATTTCTTCAAACTGATAATCCGC GGTCGTGGCGGCCACGCGTCGACCCCGCAGCTGCTTGTGGACCCCGTACCGATTACCGCC GAGATCGTGATGGCAATCCAGACGATTACTGCGCGCAAGATCGACCCGAGGGTGGTGCCC GTTGTTTCGATTACAACGATGACGACGGGACCGAATGAGAGTCACAACGTGATCCCCAAC GAGGTGAAGCTGATGGGGACTGTGCGGTCGCGGCACAAGGCTGTGCGTGAGCAGGTGCCG CGCGACATCGAGCGCATTGCGTCGAACATTGCTGCTGCACACGGCGCCGCTGCAACGTTG GACTTCACGTTCGGGTACGACTGCTGCGACAACGACCCTGAGGTAACTGCGCAGGTGCGA TGCATCGGCGAGCGTATTCTTGGTTCTGCCAACATCATCGATCCCAAGGTGCCGCTATAT GGTGGTGAGGACTTTTCTGCGTACCAGCTGGAGAAGCCCGGCTGCTTCCTGTGGCTGGGT ACGGCCAACAAGTCGCAGGGTATCTGCGAGATGTGCCACTCGACGAAGTTTCGTGTCGAT GAGACCGCGCTCCCGATTGGTGTCAGCTTCCACGTGGGCTACGTGTACGACAACGTCATG GCGTAA
  • Download Fasta

  • Fasta :-

    MNAYADVYRARSVYPLSILLTHVPRNSPPPHIPPPYLSHKIMPVPFQQLMCEVRATADET IKWRRYIHQYPELSFKEFRTAAFVAETLRSFGCPALAVTHPVPTAVVANLTGGAGDGPIV ALRADMDALPGDEETDLPFKSQNTGAMHACGHDAHTAMLLSAAKVICAHQADIKGSVRFI FQHAEELLPGGAKDLVAAGVMEGVKSIFGMHCSPRYEAGTVGLMPGINTSYTDFFKLIIR GRGGHASTPQLLVDPVPITAEIVMAIQTITARKIDPRVVPVVSITTMTTGPNESHNVIPN EVKLMGTVRSRHKAVREQVPRDIERIASNIAAAHGAAATLDFTFGYDCCDNDPEVTAQVR CIGERILGSANIIDPKVPLYGGEDFSAYQLEKPGCFLWLGTANKSQGICEMCHSTKFRVD ETALPIGVSFHVGYVYDNVMA

  • title: metal binding site
  • coordinates: C150,H152,E185,E186,H211,C412
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India