LdBPK_310110.1 | O-sialoglycoprotein endopeptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_310110.1OTHER0.9849560.0034010.011643
No Results

  • Fasta :-

    >LdBPK_310110.1 MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRETYITPPGTGFLPRETAIHHSQHVLQVV QRAMHDAAVTPADIDIISYTKGPGMGAPLTVGCTVAKTLSLLWGKPLVGVNHCVGHIEMG RVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAVGNCLDRVARLLDISNDPAPG YNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTDPGVCEVSKKRRKAAP SLASTPVPPGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQE MMQLMAAERGGRCFDMDQRYCIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYV AWRD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_310110.1.fa Sequence name : LdBPK_310110 Sequence length : 364 VALUES OF COMPUTED PARAMETERS Coef20 : 3.750 CoefTot : 0.128 ChDiff : 0 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.335 1.418 0.200 0.519 MesoH : 0.003 0.495 -0.220 0.290 MuHd_075 : 3.611 3.081 2.754 0.610 MuHd_095 : 34.302 17.905 8.921 6.665 MuHd_100 : 25.020 14.065 5.853 4.667 MuHd_105 : 14.976 8.481 2.363 2.640 Hmax_075 : 7.583 11.783 0.596 3.955 Hmax_095 : 15.200 13.037 2.773 5.198 Hmax_100 : 5.800 11.800 -0.123 3.480 Hmax_105 : 7.200 9.100 -0.271 2.970 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8932 0.1068 DFMC : 0.9041 0.0959
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 364 LdBPK_310110.1 MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRETYITPPGTGFLPRETAIHHSQHVLQVVQRAMHDAAVTPADIDIISYT 80 KGPGMGAPLTVGCTVAKTLSLLWGKPLVGVNHCVGHIEMGRVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAV 160 GNCLDRVARLLDISNDPAPGYNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTDPGVCEVSKKRRKAAP 240 SLASTPVPPGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQEMMQLMAAERGGRCFDMDQRY 320 CIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYVAWRD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_310110.1 2 -----MK|RT 0.059 . LdBPK_310110.1 3 ----MKR|TL 0.231 . LdBPK_310110.1 15 IEGSANK|IG 0.059 . LdBPK_310110.1 32 TVLSNVR|ET 0.081 . LdBPK_310110.1 46 GTGFLPR|ET 0.116 . LdBPK_310110.1 62 VLQVVQR|AM 0.131 . LdBPK_310110.1 81 DIISYTK|GP 0.063 . LdBPK_310110.1 97 VGCTVAK|TL 0.063 . LdBPK_310110.1 105 LSLLWGK|PL 0.064 . LdBPK_310110.1 121 GHIEMGR|VV 0.136 . LdBPK_310110.1 125 MGRVVTK|SE 0.093 . LdBPK_310110.1 148 IAYADHR|YR 0.093 . LdBPK_310110.1 150 YADHRYR|IF 0.108 . LdBPK_310110.1 166 VGNCLDR|VA 0.078 . LdBPK_310110.1 169 CLDRVAR|LL 0.289 . LdBPK_310110.1 186 GYNIEQK|AK 0.065 . LdBPK_310110.1 188 NIEQKAK|KG 0.062 . LdBPK_310110.1 189 IEQKAKK|GK 0.118 . LdBPK_310110.1 191 QKAKKGK|CY 0.082 . LdBPK_310110.1 195 KGKCYIR|LP 0.090 . LdBPK_310110.1 201 RLPYTVK|GM 0.072 . LdBPK_310110.1 233 GVCEVSK|KR 0.063 . LdBPK_310110.1 234 VCEVSKK|RR 0.086 . LdBPK_310110.1 235 CEVSKKR|RK 0.108 . LdBPK_310110.1 236 EVSKKRR|KA 0.338 . LdBPK_310110.1 237 VSKKRRK|AA 0.094 . LdBPK_310110.1 276 LVEVTER|AM 0.099 . LdBPK_310110.1 282 RAMSQIK|AS 0.070 . LdBPK_310110.1 296 GGVGCNK|RL 0.059 . LdBPK_310110.1 297 GVGCNKR|LQ 0.173 . LdBPK_310110.1 309 QLMAAER|GG 0.082 . LdBPK_310110.1 312 AAERGGR|CF 0.205 . LdBPK_310110.1 319 CFDMDQR|YC 0.089 . LdBPK_310110.1 352 EATITQR|FR 0.080 . LdBPK_310110.1 354 TITQRFR|TD 0.095 . LdBPK_310110.1 363 EVYVAWR|D- 0.105 . ____________________________^_________________

  • Fasta :-

    >LdBPK_310110.1 ATGAAGCGCACACTGTCCCTCGGGATCGAGGGAAGCGCCAATAAGATCGGTGTGGGGGTG GTGGACCAGAGCGGTACGGTGCTCTCTAACGTACGCGAAACCTACATCACCCCACCTGGG ACCGGGTTCCTGCCGCGCGAGACGGCCATTCATCACTCCCAGCACGTGCTGCAAGTCGTA CAGCGAGCCATGCACGATGCCGCGGTGACTCCGGCCGACATCGATATCATCTCGTACACC AAGGGCCCTGGCATGGGCGCGCCGCTCACTGTCGGCTGCACCGTGGCCAAAACACTGTCC CTCCTGTGGGGGAAGCCGCTGGTGGGTGTCAACCACTGCGTCGGGCACATTGAGATGGGC CGCGTCGTCACGAAGAGCGAAAACCCTGTGGTGCTGTACGTCAGCGGGGGCAACACGCAA GTCATCGCCTACGCTGATCACCGCTACCGCATTTTCGGTGAGACGATCGACATTGCCGTG GGCAACTGCCTGGACCGTGTTGCCCGCCTCCTCGACATCTCAAACGACCCGGCACCGGGC TACAATATTGAACAGAAGGCCAAGAAGGGCAAGTGCTACATCCGCTTGCCCTACACGGTG AAGGGAATGGACATGTCATTCACCGGCATCCTCTCCTACATCGAACAGCTTGTGCACCAC CCTCAATTCACTGACCCGGGTGTTTGCGAGGTGTCCAAAAAGCGGCGCAAGGCGGCACCG TCCCTGGCGAGCACGCCGGTGCCGCCCGGCGAGACCTTCAACACGGACGACATCTGCTTC TCCCTGCAGGAGACGATCTTCGCCATGCTAGTCGAAGTGACGGAGCGCGCCATGTCGCAA ATCAAAGCATCTGACGTGCTCATTGTCGGCGGGGTGGGCTGCAACAAGCGCCTGCAGGAG ATGATGCAGCTGATGGCGGCAGAGCGTGGGGGTCGCTGCTTCGACATGGATCAGCGATAC TGCATCGACAATGGCTGCATGATCGCGTACGCCGGGCTGCTCCAGTATCTGAGTGGGTCC TTCACGACCATGGCAGAGGCGACTATCACGCAGCGCTTTCGCACCGATGAAGTTTACGTC GCGTGGCGCGATTGA
  • Download Fasta

  • Fasta :-

    MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRETYITPPGTGFLPRETAIHHSQHVLQVV QRAMHDAAVTPADIDIISYTKGPGMGAPLTVGCTVAKTLSLLWGKPLVGVNHCVGHIEMG RVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAVGNCLDRVARLLDISNDPAPG YNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTDPGVCEVSKKRRKAAP SLASTPVPPGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQE MMQLMAAERGGRCFDMDQRYCIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYV AWRD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_310110.1279 SERAMSQIKA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India