LdBPK_312040.1 | GP63-like protein, leishmanolysin-like protein

_IDPredictionOTHERSPmTPCS_Position
LdBPK_312040.1SP0.1006180.8928030.006579CS pos: 28-29. TVA-AP. Pr: 0.5410
No Results

  • Fasta :-

    >LdBPK_312040.1 MSHVPAVLWRMELWLNALFIYAAFTTVAAPSSCGHSQVVQEQGHLPLTYAALRNNGNGLR YQVEMGLERWNGSATAEQHAVEPQATVTISSGREDSEWAPIRIAVFMPDLEDESKYCTAV GQMRPDSSGSLVPCTSNADLLTDAKKAVLINSILPQAVNMHAQRLKVRRLAASTSIVVNS MPGSYCGSFTVPTAHRTTGVPNADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATITSRP AVGAMYFNPRYLPTSVGETQEHIDRYGGNPSGSTNRLRRVAAHELLHALGFTSSVFKARG MFATVPSLRGKRNVPVLNSSSVRAAAKAKYGISDAEVFYGAELEDQGAPGTSLSHWKRRA AKDELMAPVLSLARYSSLSLAALEDMGFYKVDFSKAEPVALGATAGGKLFTEPCLTEGTS NTPTVFCDSLSPSVRSCTADRLSIGRCALTTYSSSLPSYAQYFPNQPTLGGSLSHSDYCP VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKSASRTY EVLVIGANSWLSCGAGGTGVTVQPAVSSPNVFVEGGLIACPPYDDVCYANPVAFAEVEAA PTTSTTASPSAATAATHGMVVSGLVAVAVLLGSGIC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_312040.1.fa Sequence name : LdBPK_312040 Sequence length : 636 VALUES OF COMPUTED PARAMETERS Coef20 : 4.484 CoefTot : -1.612 ChDiff : 0 ZoneTo : 63 KR : 3 DE : 2 CleavSite : 62 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.076 2.365 0.531 0.774 MesoH : 0.615 0.808 0.007 0.399 MuHd_075 : 22.998 21.770 8.289 5.723 MuHd_095 : 25.889 19.916 6.362 5.954 MuHd_100 : 25.657 17.828 5.192 5.495 MuHd_105 : 27.835 20.691 6.668 6.117 Hmax_075 : 18.783 14.817 4.256 6.950 Hmax_095 : 8.750 11.200 1.468 4.086 Hmax_100 : 5.100 24.500 -0.330 3.210 Hmax_105 : 9.917 19.863 1.391 4.853 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8460 0.1540 DFMC : 0.8994 0.1006
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 636 LdBPK_312040.1 MSHVPAVLWRMELWLNALFIYAAFTTVAAPSSCGHSQVVQEQGHLPLTYAALRNNGNGLRYQVEMGLERWNGSATAEQHA 80 VEPQATVTISSGREDSEWAPIRIAVFMPDLEDESKYCTAVGQMRPDSSGSLVPCTSNADLLTDAKKAVLINSILPQAVNM 160 HAQRLKVRRLAASTSIVVNSMPGSYCGSFTVPTAHRTTGVPNADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATITSRP 240 AVGAMYFNPRYLPTSVGETQEHIDRYGGNPSGSTNRLRRVAAHELLHALGFTSSVFKARGMFATVPSLRGKRNVPVLNSS 320 SVRAAAKAKYGISDAEVFYGAELEDQGAPGTSLSHWKRRAAKDELMAPVLSLARYSSLSLAALEDMGFYKVDFSKAEPVA 400 LGATAGGKLFTEPCLTEGTSNTPTVFCDSLSPSVRSCTADRLSIGRCALTTYSSSLPSYAQYFPNQPTLGGSLSHSDYCP 480 VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKSASRTYEVLVIGANSWLSCGAGGTGV 560 TVQPAVSSPNVFVEGGLIACPPYDDVCYANPVAFAEVEAAPTTSTTASPSAATAATHGMVVSGLVAVAVLLGSGIC 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................P......................................... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_312040.1 10 VPAVLWR|ME 0.086 . LdBPK_312040.1 53 LTYAALR|NN 0.102 . LdBPK_312040.1 60 NNGNGLR|YQ 0.075 . LdBPK_312040.1 69 VEMGLER|WN 0.088 . LdBPK_312040.1 93 VTISSGR|ED 0.084 . LdBPK_312040.1 102 SEWAPIR|IA 0.101 . LdBPK_312040.1 115 DLEDESK|YC 0.072 . LdBPK_312040.1 124 TAVGQMR|PD 0.093 . LdBPK_312040.1 145 DLLTDAK|KA 0.057 . LdBPK_312040.1 146 LLTDAKK|AV 0.093 . LdBPK_312040.1 164 VNMHAQR|LK 0.079 . LdBPK_312040.1 166 MHAQRLK|VR 0.060 . LdBPK_312040.1 168 AQRLKVR|RL 0.099 . LdBPK_312040.1 169 QRLKVRR|LA 0.144 . LdBPK_312040.1 196 TVPTAHR|TT 0.093 . LdBPK_312040.1 218 GPTSTPK|SF 0.086 . LdBPK_312040.1 239 TATITSR|PA 0.100 . LdBPK_312040.1 250 AMYFNPR|YL 0.107 . LdBPK_312040.1 265 TQEHIDR|YG 0.087 . LdBPK_312040.1 276 PSGSTNR|LR 0.078 . LdBPK_312040.1 278 GSTNRLR|RV 0.138 . LdBPK_312040.1 279 STNRLRR|VA 0.627 *ProP* LdBPK_312040.1 297 FTSSVFK|AR 0.072 . LdBPK_312040.1 299 SSVFKAR|GM 0.167 . LdBPK_312040.1 309 ATVPSLR|GK 0.084 . LdBPK_312040.1 311 VPSLRGK|RN 0.078 . LdBPK_312040.1 312 PSLRGKR|NV 0.456 . LdBPK_312040.1 323 LNSSSVR|AA 0.151 . LdBPK_312040.1 327 SVRAAAK|AK 0.074 . LdBPK_312040.1 329 RAAAKAK|YG 0.075 . LdBPK_312040.1 357 TSLSHWK|RR 0.065 . LdBPK_312040.1 358 SLSHWKR|RA 0.378 . LdBPK_312040.1 359 LSHWKRR|AA 0.466 . LdBPK_312040.1 362 WKRRAAK|DE 0.184 . LdBPK_312040.1 374 PVLSLAR|YS 0.081 . LdBPK_312040.1 390 EDMGFYK|VD 0.062 . LdBPK_312040.1 395 YKVDFSK|AE 0.068 . LdBPK_312040.1 408 GATAGGK|LF 0.055 . LdBPK_312040.1 435 SLSPSVR|SC 0.203 . LdBPK_312040.1 441 RSCTADR|LS 0.074 . LdBPK_312040.1 446 DRLSIGR|CA 0.087 . LdBPK_312040.1 508 ITGDNAR|CF 0.103 . LdBPK_312040.1 518 ADNLLVK|FT 0.083 . LdBPK_312040.1 530 PGAICAK|VH 0.063 . LdBPK_312040.1 534 CAKVHCK|SA 0.113 . LdBPK_312040.1 538 HCKSASR|TY 0.078 . ____________________________^_________________

  • Fasta :-

    >LdBPK_312040.1 ATGTCGCATGTGCCCGCCGTGCTGTGGCGTATGGAGTTGTGGCTGAATGCTCTCTTCATT TACGCAGCTTTCACCACAGTCGCGGCGCCGTCCTCGTGCGGGCACAGCCAGGTCGTCCAA GAGCAAGGTCACCTCCCTCTCACATACGCAGCGCTGCGCAACAATGGCAACGGTCTGCGC TATCAGGTCGAAATGGGCCTCGAGCGATGGAATGGCTCGGCCACCGCCGAGCAGCATGCC GTCGAGCCACAGGCCACCGTCACGATCAGCAGCGGCAGAGAGGACTCGGAGTGGGCCCCC ATCCGCATTGCTGTCTTCATGCCCGATCTGGAGGACGAATCGAAGTACTGCACAGCCGTT GGCCAGATGCGCCCCGATTCCAGCGGCTCCCTGGTGCCGTGCACCAGCAACGCTGATCTC TTGACGGATGCGAAAAAGGCTGTGCTGATCAACTCTATACTACCCCAGGCAGTCAACATG CACGCGCAGCGACTAAAGGTGCGTCGGCTGGCGGCCAGCACCTCCATCGTCGTGAACTCC ATGCCGGGGTCATACTGCGGCTCCTTCACCGTCCCGACAGCGCACCGGACAACGGGCGTG CCGAACGCGGATTTTGTCGTCTACGTGGCAGCGGGTCCGACATCTACTCCGAAGAGCTTC ATTGCGTGGGCTGTTACTTGCCAGTATTACCCCAACACGGCCACGATCACGAGCCGCCCA GCTGTGGGGGCGATGTACTTTAACCCGCGCTACCTCCCGACATCGGTAGGGGAGACGCAA GAGCATATTGACCGTTATGGAGGCAACCCGTCTGGTAGCACGAATCGTCTTCGCCGCGTT GCCGCTCATGAACTGCTGCACGCGCTCGGCTTCACCTCAAGCGTCTTCAAGGCACGCGGC ATGTTTGCCACCGTCCCGTCTCTGCGTGGAAAAAGGAACGTACCGGTGCTGAACTCATCG TCTGTGCGCGCGGCTGCCAAGGCCAAGTACGGCATCTCTGACGCAGAGGTGTTTTATGGC GCCGAGCTGGAAGATCAAGGCGCGCCGGGCACGTCACTTTCGCACTGGAAGCGCCGCGCC GCGAAGGATGAACTGATGGCTCCTGTGCTCAGTCTGGCGCGCTACAGCTCCTTGTCGCTC GCTGCCCTGGAGGATATGGGCTTCTACAAAGTCGACTTCAGTAAGGCGGAGCCTGTTGCC CTCGGCGCCACCGCAGGGGGTAAGCTCTTCACAGAGCCGTGCTTGACGGAAGGCACCTCC AACACCCCTACGGTGTTCTGCGACAGCCTCAGCCCCTCGGTGCGCAGCTGCACGGCGGAC CGGTTGAGCATTGGTCGGTGCGCCCTCACTACCTACTCCTCGTCTCTGCCAAGCTATGCG CAGTACTTCCCTAATCAGCCGACCCTCGGTGGCTCTCTGTCGCATAGCGACTACTGCCCC GTGATACAGCCCCTCTCCAACACCGGGTGCAGTGGCGGCTCGCTAGGCGCGATGCCGGGC AGCATCACTGGTGACAACGCGCGCTGCTTCGACGCAGACAATTTGCTGGTGAAGTTCACA TTCACTCAGCCTGGTGCCATCTGTGCCAAGGTACACTGCAAGAGCGCGTCTCGCACCTAT GAGGTACTCGTGATCGGCGCGAACAGTTGGCTCTCGTGTGGCGCCGGTGGCACTGGGGTG ACGGTGCAGCCAGCAGTGAGTAGCCCCAACGTGTTCGTGGAGGGCGGCCTTATTGCCTGT CCGCCCTACGACGATGTGTGCTACGCGAACCCGGTCGCCTTCGCGGAAGTGGAAGCGGCC CCCACCACCTCCACAACAGCGTCGCCAAGCGCGGCTACAGCTGCTACGCACGGAATGGTC GTTAGCGGCCTTGTTGCTGTCGCTGTGTTGCTCGGTTCGGGCATCTGCTAA
  • Download Fasta

  • Fasta :-

    MSHVPAVLWRMELWLNALFIYAAFTTVAAPSSCGHSQVVQEQGHLPLTYAALRNNGNGLR YQVEMGLERWNGSATAEQHAVEPQATVTISSGREDSEWAPIRIAVFMPDLEDESKYCTAV GQMRPDSSGSLVPCTSNADLLTDAKKAVLINSILPQAVNMHAQRLKVRRLAASTSIVVNS MPGSYCGSFTVPTAHRTTGVPNADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATITSRP AVGAMYFNPRYLPTSVGETQEHIDRYGGNPSGSTNRLRRVAAHELLHALGFTSSVFKARG MFATVPSLRGKRNVPVLNSSSVRAAAKAKYGISDAEVFYGAELEDQGAPGTSLSHWKRRA AKDELMAPVLSLARYSSLSLAALEDMGFYKVDFSKAEPVALGATAGGKLFTEPCLTEGTS NTPTVFCDSLSPSVRSCTADRLSIGRCALTTYSSSLPSYAQYFPNQPTLGGSLSHSDYCP VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKSASRTY EVLVIGANSWLSCGAGGTGVTVQPAVSSPNVFVEGGLIACPPYDDVCYANPVAFAEVEAA PTTSTTASPSAATAATHGMVVSGLVAVAVLLGSGIC

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_312040.191 SVTISSGRED0.994unspLdBPK_312040.1255 SYLPTSVGET0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India