LdBPK_324040.1 | AUT2/APG4/ATG4 cysteine peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_324040.1OTHER0.9992160.0002270.000557
No Results

  • Fasta :-

    >LdBPK_324040.1 MSTNAKMAEKTPCVDLGSLFKWWLNPSKIFRTPNRKMKNTTPVVVVGSGSHSGDGTTEFV KAATKKLLYFSYRNCFPPLPNGSTTDTRWGCLVRTTQMLVGTCLLRYHCQGAYVLPEADN AELKERISRLFMDVPSAPLGIHKAEDEAHKNSVKYASMLSPTEAGMAIAAALIAFHAQGG DVPFTFCCESRNIDEPAVMAKLSEGQHVILIIPVVLGIAPMSDQYERMMLKILDMKACCG IAGGLKRASLYMFGHQGRSVFFMDPHYIQNAYTSDRTVGTLEGARGELSARRFDPCMVLG FYLHTLEDYRVFAEELAVANSLVAFPLISFGQRPREGTTPSDNGVVSVAESEEGIMPHEN EKSQLSPNPLAAGGGHARSSNPISPLPS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_324040.1.fa Sequence name : LdBPK_324040 Sequence length : 388 VALUES OF COMPUTED PARAMETERS Coef20 : 3.893 CoefTot : 0.147 ChDiff : 0 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.488 1.835 0.183 0.724 MesoH : 0.014 0.714 -0.197 0.338 MuHd_075 : 27.182 6.621 7.836 3.293 MuHd_095 : 9.320 6.747 3.016 3.172 MuHd_100 : 7.222 3.229 1.129 2.144 MuHd_105 : 12.840 3.757 1.563 2.033 Hmax_075 : 10.400 4.000 1.716 2.730 Hmax_095 : 3.500 5.513 0.320 2.739 Hmax_100 : 2.000 4.100 -0.180 2.180 Hmax_105 : 8.000 4.800 -0.299 1.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8988 0.1012 DFMC : 0.8688 0.1312
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 388 LdBPK_324040.1 MSTNAKMAEKTPCVDLGSLFKWWLNPSKIFRTPNRKMKNTTPVVVVGSGSHSGDGTTEFVKAATKKLLYFSYRNCFPPLP 80 NGSTTDTRWGCLVRTTQMLVGTCLLRYHCQGAYVLPEADNAELKERISRLFMDVPSAPLGIHKAEDEAHKNSVKYASMLS 160 PTEAGMAIAAALIAFHAQGGDVPFTFCCESRNIDEPAVMAKLSEGQHVILIIPVVLGIAPMSDQYERMMLKILDMKACCG 240 IAGGLKRASLYMFGHQGRSVFFMDPHYIQNAYTSDRTVGTLEGARGELSARRFDPCMVLGFYLHTLEDYRVFAEELAVAN 320 SLVAFPLISFGQRPREGTTPSDNGVVSVAESEEGIMPHENEKSQLSPNPLAAGGGHARSSNPISPLPS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_324040.1 6 -MSTNAK|MA 0.090 . LdBPK_324040.1 10 NAKMAEK|TP 0.061 . LdBPK_324040.1 21 DLGSLFK|WW 0.055 . LdBPK_324040.1 28 WWLNPSK|IF 0.060 . LdBPK_324040.1 31 NPSKIFR|TP 0.110 . LdBPK_324040.1 35 IFRTPNR|KM 0.086 . LdBPK_324040.1 36 FRTPNRK|MK 0.076 . LdBPK_324040.1 38 TPNRKMK|NT 0.290 . LdBPK_324040.1 61 GTTEFVK|AA 0.071 . LdBPK_324040.1 65 FVKAATK|KL 0.050 . LdBPK_324040.1 66 VKAATKK|LL 0.106 . LdBPK_324040.1 73 LLYFSYR|NC 0.107 . LdBPK_324040.1 88 GSTTDTR|WG 0.092 . LdBPK_324040.1 94 RWGCLVR|TT 0.087 . LdBPK_324040.1 106 VGTCLLR|YH 0.077 . LdBPK_324040.1 124 ADNAELK|ER 0.062 . LdBPK_324040.1 126 NAELKER|IS 0.083 . LdBPK_324040.1 129 LKERISR|LF 0.245 . LdBPK_324040.1 143 APLGIHK|AE 0.065 . LdBPK_324040.1 150 AEDEAHK|NS 0.058 . LdBPK_324040.1 154 AHKNSVK|YA 0.079 . LdBPK_324040.1 191 TFCCESR|NI 0.107 . LdBPK_324040.1 201 EPAVMAK|LS 0.089 . LdBPK_324040.1 227 MSDQYER|MM 0.115 . LdBPK_324040.1 231 YERMMLK|IL 0.065 . LdBPK_324040.1 236 LKILDMK|AC 0.066 . LdBPK_324040.1 246 GIAGGLK|RA 0.065 . LdBPK_324040.1 247 IAGGLKR|AS 0.188 . LdBPK_324040.1 258 MFGHQGR|SV 0.238 . LdBPK_324040.1 276 NAYTSDR|TV 0.177 . LdBPK_324040.1 285 GTLEGAR|GE 0.067 . LdBPK_324040.1 291 RGELSAR|RF 0.090 . LdBPK_324040.1 292 GELSARR|FD 0.111 . LdBPK_324040.1 310 HTLEDYR|VF 0.070 . LdBPK_324040.1 333 LISFGQR|PR 0.097 . LdBPK_324040.1 335 SFGQRPR|EG 0.074 . LdBPK_324040.1 362 MPHENEK|SQ 0.068 . LdBPK_324040.1 378 AGGGHAR|SS 0.149 . ____________________________^_________________

  • Fasta :-

    >LdBPK_324040.1 ATGAGCACGAACGCCAAAATGGCAGAGAAGACGCCATGCGTCGACTTAGGCAGCCTTTTC AAGTGGTGGCTCAACCCCAGCAAGATCTTCCGAACACCGAACCGCAAGATGAAAAATACG ACGCCTGTCGTCGTGGTGGGCTCAGGCTCACATAGCGGCGATGGGACGACGGAGTTTGTG AAGGCGGCAACGAAAAAGCTCCTCTACTTTTCCTACCGCAACTGCTTCCCTCCCTTGCCG AACGGGTCTACAACGGACACCCGCTGGGGCTGCCTTGTGCGCACCACACAAATGCTTGTT GGCACCTGCCTTCTGCGATACCACTGCCAAGGCGCCTACGTGCTGCCAGAGGCGGACAAC GCTGAGCTGAAGGAGAGGATATCGAGGTTGTTCATGGACGTCCCGTCCGCCCCACTTGGG ATCCACAAGGCCGAGGATGAGGCTCACAAGAATAGTGTCAAATACGCCAGTATGCTGTCC CCCACGGAGGCGGGCATGGCGATCGCAGCCGCTCTGATTGCTTTTCACGCACAAGGCGGG GATGTGCCATTCACATTTTGCTGCGAAAGCCGCAACATTGACGAGCCGGCGGTGATGGCG AAGCTCTCGGAGGGCCAGCATGTTATTCTTATTATCCCTGTAGTCTTGGGCATTGCACCC ATGTCGGACCAGTATGAGCGCATGATGCTCAAGATTCTCGACATGAAGGCGTGCTGCGGC ATCGCGGGAGGCCTCAAACGAGCATCCTTGTACATGTTTGGTCATCAGGGCCGCAGCGTC TTTTTCATGGATCCACACTACATCCAAAACGCCTACACCTCTGACAGGACCGTCGGCACC CTCGAAGGGGCTCGCGGCGAGCTGAGTGCGCGTAGATTTGACCCGTGCATGGTTCTTGGC TTTTATCTTCACACCCTGGAGGATTACCGCGTGTTTGCGGAAGAACTAGCGGTGGCCAAT TCGCTCGTGGCGTTTCCACTAATCAGCTTTGGTCAACGACCCAGGGAGGGGACGACCCCC TCCGACAATGGCGTCGTTTCTGTGGCGGAGAGCGAGGAGGGCATTATGCCACACGAGAAC GAGAAGTCACAGCTAAGCCCGAATCCGCTCGCTGCTGGTGGAGGGCACGCCAGAAGCTCG AATCCGATCTCTCCTCTACCGAGCTAG
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  • Fasta :-

    MSTNAKMAEKTPCVDLGSLFKWWLNPSKIFRTPNRKMKNTTPVVVVGSGSHSGDGTTEFV KAATKKLLYFSYRNCFPPLPNGSTTDTRWGCLVRTTQMLVGTCLLRYHCQGAYVLPEADN AELKERISRLFMDVPSAPLGIHKAEDEAHKNSVKYASMLSPTEAGMAIAAALIAFHAQGG DVPFTFCCESRNIDEPAVMAKLSEGQHVILIIPVVLGIAPMSDQYERMMLKILDMKACCG IAGGLKRASLYMFGHQGRSVFFMDPHYIQNAYTSDRTVGTLEGARGELSARRFDPCMVLG FYLHTLEDYRVFAEELAVANSLVAFPLISFGQRPREGTTPSDNGVVSVAESEEGIMPHEN EKSQLSPNPLAAGGGHARSSNPISPLPS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_324040.183 SLPNGSTTDT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India