LdBPK_330410.1 | serine peptidase, putative

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_330410.1OTHER0.9383790.0003460.061275
No Results

  • Fasta :-

    >LdBPK_330410.1 MLQSLVNSIVFAPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDSKGDLVTKDNL ERVVRSSMVLLFHHGNAEDLGGAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAATPAEV TEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACYLAEKHHKKVGGLVLISTFTS CLRVVSSCCLPHFCCCVDLFPNYRRIEHIMECPVLMMHGTRDNVVPHHCSSELLEDIVAR RNSALQRLLKKREGARAKQAKRSSKLGAASTGPTNTTKASAAISVADEALATAQPPPDGE KASVFDLYRRAYDGLPEAVRRVAEERLDVTAANVSIGAFHRWFAGCGHNDIEAREGHTFS DMFEYFVRFATAFSMEREALLSAKPLTGAAKASRDAFNRADSEIRE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_330410.1.fa Sequence name : LdBPK_330410 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 3.923 CoefTot : -0.750 ChDiff : 5 ZoneTo : 40 KR : 7 DE : 1 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.647 1.747 0.532 0.613 MesoH : 0.037 0.669 -0.103 0.321 MuHd_075 : 22.878 20.889 6.745 5.008 MuHd_095 : 27.143 20.069 7.479 7.607 MuHd_100 : 29.203 22.301 8.486 8.382 MuHd_105 : 30.458 22.755 7.579 8.273 Hmax_075 : 0.817 7.700 -0.283 3.220 Hmax_095 : 8.225 16.800 0.825 4.541 Hmax_100 : 6.600 13.400 0.549 4.540 Hmax_105 : 1.000 11.025 0.376 3.815 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5823 0.4177 DFMC : 0.7200 0.2800
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 LdBPK_330410.1 MLQSLVNSIVFAPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDSKGDLVTKDNLERVVRSSMVLLFHHGNAEDL 80 GGAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAATPAEVTEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACY 160 LAEKHHKKVGGLVLISTFTSCLRVVSSCCLPHFCCCVDLFPNYRRIEHIMECPVLMMHGTRDNVVPHHCSSELLEDIVAR 240 RNSALQRLLKKREGARAKQAKRSSKLGAASTGPTNTTKASAAISVADEALATAQPPPDGEKASVFDLYRRAYDGLPEAVR 320 RVAEERLDVTAANVSIGAFHRWFAGCGHNDIEAREGHTFSDMFEYFVRFATAFSMEREALLSAKPLTGAAKASRDAFNRA 400 DSEIRE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_330410.1 15 IVFAPPR|DP 0.095 . LdBPK_330410.1 22 DPNSLQR|VQ 0.078 . LdBPK_330410.1 28 RVQLLQR|KR 0.079 . LdBPK_330410.1 29 VQLLQRK|RH 0.060 . LdBPK_330410.1 30 QLLQRKR|HM 0.129 . LdBPK_330410.1 37 HMSFTSK|KS 0.076 . LdBPK_330410.1 38 MSFTSKK|SG 0.171 . LdBPK_330410.1 42 SKKSGER|IS 0.079 . LdBPK_330410.1 51 YFHFDSK|GD 0.060 . LdBPK_330410.1 57 KGDLVTK|DN 0.061 . LdBPK_330410.1 62 TKDNLER|VV 0.102 . LdBPK_330410.1 65 NLERVVR|SS 0.422 . LdBPK_330410.1 123 PAEVTEK|SV 0.099 . LdBPK_330410.1 145 LGYPAHR|II 0.094 . LdBPK_330410.1 151 RIIIVGR|SV 0.424 . LdBPK_330410.1 164 ACYLAEK|HH 0.062 . LdBPK_330410.1 167 LAEKHHK|KV 0.096 . LdBPK_330410.1 168 AEKHHKK|VG 0.123 . LdBPK_330410.1 183 TFTSCLR|VV 0.082 . LdBPK_330410.1 204 DLFPNYR|RI 0.096 . LdBPK_330410.1 205 LFPNYRR|IE 0.115 . LdBPK_330410.1 221 LMMHGTR|DN 0.096 . LdBPK_330410.1 240 LEDIVAR|RN 0.106 . LdBPK_330410.1 241 EDIVARR|NS 0.106 . LdBPK_330410.1 247 RNSALQR|LL 0.122 . LdBPK_330410.1 250 ALQRLLK|KR 0.114 . LdBPK_330410.1 251 LQRLLKK|RE 0.096 . LdBPK_330410.1 252 QRLLKKR|EG 0.166 . LdBPK_330410.1 256 KKREGAR|AK 0.114 . LdBPK_330410.1 258 REGARAK|QA 0.074 . LdBPK_330410.1 261 ARAKQAK|RS 0.110 . LdBPK_330410.1 262 RAKQAKR|SS 0.284 . LdBPK_330410.1 265 QAKRSSK|LG 0.120 . LdBPK_330410.1 278 GPTNTTK|AS 0.066 . LdBPK_330410.1 301 PPPDGEK|AS 0.054 . LdBPK_330410.1 309 SVFDLYR|RA 0.111 . LdBPK_330410.1 310 VFDLYRR|AY 0.112 . LdBPK_330410.1 320 GLPEAVR|RV 0.093 . LdBPK_330410.1 321 LPEAVRR|VA 0.199 . LdBPK_330410.1 326 RRVAEER|LD 0.089 . LdBPK_330410.1 341 SIGAFHR|WF 0.115 . LdBPK_330410.1 354 HNDIEAR|EG 0.097 . LdBPK_330410.1 368 MFEYFVR|FA 0.104 . LdBPK_330410.1 377 TAFSMER|EA 0.072 . LdBPK_330410.1 384 EALLSAK|PL 0.071 . LdBPK_330410.1 391 PLTGAAK|AS 0.070 . LdBPK_330410.1 394 GAAKASR|DA 0.139 . LdBPK_330410.1 399 SRDAFNR|AD 0.135 . LdBPK_330410.1 405 RADSEIR|E- 0.081 . ____________________________^_________________

  • Fasta :-

    >LdBPK_330410.1 ATGCTGCAGTCGCTCGTGAACAGCATCGTCTTTGCGCCCCCACGGGACCCGAACAGTCTG CAGCGGGTGCAGCTGCTGCAGCGCAAGCGGCACATGAGCTTTACGAGCAAGAAGAGCGGC GAGAGAATTTCGTACTTCCACTTTGATTCAAAAGGCGATCTCGTGACCAAGGACAACCTC GAACGGGTCGTGCGCTCCTCCATGGTCCTGCTCTTCCACCACGGCAACGCCGAGGACCTC GGCGGCGCCTTCAGCTACGCGCAGTCCATGGCCTGCGTCTTTGGAGTGGCGGTGGTGGTG TACGACTACTGCGGCTACGGTTTTTCTGGCTTTCCCGACGCTGCGACGCCGGCGGAGGTG ACGGAGAAGAGCGTCTACAGCGACGCCGATCACATGTACGCCCACCTCCTCTCCCTCGGC TACCCTGCTCACCGCATTATTATCGTTGGCCGCTCCGTCGGGGGTGGGCCGGCGTGCTAC CTCGCTGAGAAGCATCACAAGAAGGTGGGGGGCTTAGTGCTTATATCGACCTTTACCTCC TGCCTCCGCGTCGTCTCGTCTTGTTGCCTTCCGCACTTCTGCTGTTGCGTTGACTTGTTT CCTAACTACCGCCGCATCGAGCACATCATGGAGTGCCCGGTGCTGATGATGCACGGAACC CGCGACAACGTCGTCCCACACCATTGCTCGAGCGAGTTACTCGAGGACATCGTAGCGCGC CGCAACAGCGCGTTGCAACGACTCTTGAAGAAGCGTGAGGGGGCGCGGGCAAAGCAGGCG AAACGCTCAAGTAAGCTGGGTGCTGCCTCAACAGGGCCAACAAACACTACGAAGGCATCC GCGGCTATCAGCGTTGCTGACGAGGCGCTCGCCACTGCCCAGCCACCCCCTGATGGAGAG AAAGCCAGTGTGTTCGATCTCTATCGCCGCGCCTACGATGGCCTGCCCGAGGCGGTGCGG CGGGTGGCGGAGGAGCGTCTCGACGTGACCGCTGCCAACGTCAGCATCGGGGCCTTTCAC AGGTGGTTTGCGGGCTGTGGGCACAACGACATCGAGGCACGCGAGGGGCACACCTTCTCC GACATGTTTGAGTATTTTGTGCGCTTCGCGACCGCCTTCTCGATGGAGCGGGAGGCGCTC CTGTCGGCCAAGCCGCTCACCGGTGCAGCTAAGGCATCTCGTGACGCTTTTAACAGGGCT GACAGTGAGATCCGCGAGTAG
  • Download Fasta

  • Fasta :-

    MLQSLVNSIVFAPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDSKGDLVTKDNL ERVVRSSMVLLFHHGNAEDLGGAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAATPAEV TEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACYLAEKHHKKVGGLVLISTFTS CLRVVSSCCLPHFCCCVDLFPNYRRIEHIMECPVLMMHGTRDNVVPHHCSSELLEDIVAR RNSALQRLLKKREGARAKQAKRSSKLGAASTGPTNTTKASAAISVADEALATAQPPPDGE KASVFDLYRRAYDGLPEAVRRVAEERLDVTAANVSIGAFHRWFAGCGHNDIEAREGHTFS DMFEYFVRFATAFSMEREALLSAKPLTGAAKASRDAFNRADSEIRE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_330410.139 STSKKSGERI0.996unspLdBPK_330410.1402 SNRADSEIRE0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India