LdBPK_331710.1 | cytosolic nonspecific dipeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_331710.1OTHER0.9996720.0003140.000014
No Results

  • Fasta :-

    >LdBPK_331710.1 MSDFDWAVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWME GQNLLGLSYEFMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLYPWDEGLDPHKAV VRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMRVVPFKEQFATADGVSTEPGDNV ELALRNFWKPSLTVTGANLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKLLVA NPPYGAKVWFQPEVPGHGCATPELKPWLVTALNESSKMAYGNPLAFQGMGGAIPFISMLI KSYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKGLTFAISRVVAEHFRHTLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_331710.1.fa Sequence name : LdBPK_331710 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 3.779 CoefTot : 0.112 ChDiff : -12 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.859 1.588 0.230 0.697 MesoH : 0.151 0.350 -0.275 0.313 MuHd_075 : 8.946 12.884 4.254 3.430 MuHd_095 : 26.025 19.760 7.628 5.236 MuHd_100 : 20.108 15.874 6.532 3.685 MuHd_105 : 9.923 9.299 4.433 1.819 Hmax_075 : 1.700 10.150 -1.321 3.810 Hmax_095 : 0.175 10.850 -1.314 3.868 Hmax_100 : -2.200 7.200 -2.383 2.740 Hmax_105 : 3.700 9.900 -0.060 3.512 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9153 0.0847 DFMC : 0.9596 0.0404
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 LdBPK_331710.1 MSDFDWAVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWMEGQNLLGLSYEFMEVEGRTPF 80 LLVEIAGTEPTKNTLLMYGHMDKQPPLYPWDEGLDPHKAVVRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIV 160 VIEACEESGSFDLDYYMERCKERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR 240 IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMRVVPFKEQFATADGVSTEPGDNVELALRNFWKPSLTVTGANLP 320 EPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKLLVANPPYGAKVWFQPEVPGHGCATPELKPWLVTALNESSKMAY 400 GNPLAFQGMGGAIPFISMLIKSYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKGLTFAISRVVAEHFRHTLK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_331710.1 11 DWAVIQK|AV 0.102 . LdBPK_331710.1 49 ATNGLIK|KA 0.081 . LdBPK_331710.1 50 TNGLIKK|AF 0.121 . LdBPK_331710.1 77 FMEVEGR|TP 0.068 . LdBPK_331710.1 92 AGTEPTK|NT 0.062 . LdBPK_331710.1 103 MYGHMDK|QP 0.057 . LdBPK_331710.1 118 EGLDPHK|AV 0.067 . LdBPK_331710.1 122 PHKAVVR|DG 0.093 . LdBPK_331710.1 125 AVVRDGK|LY 0.168 . LdBPK_331710.1 129 DGKLYGR|GG 0.078 . LdBPK_331710.1 150 SVSVLQR|HG 0.123 . LdBPK_331710.1 157 HGIPHGR|VI 0.108 . LdBPK_331710.1 179 LDYYMER|CK 0.093 . LdBPK_331710.1 181 YYMERCK|ER 0.057 . LdBPK_331710.1 183 MERCKER|IG 0.099 . LdBPK_331710.1 210 WLTTSLR|GV 0.123 . LdBPK_331710.1 240 VVPDTFR|IA 0.087 . LdBPK_331710.1 243 DTFRIAR|EL 0.200 . LdBPK_331710.1 248 ARELLDR|VE 0.080 . LdBPK_331710.1 253 DRVEDSK|TG 0.059 . LdBPK_331710.1 256 EDSKTGK|VL 0.077 . LdBPK_331710.1 272 IPDYVVK|SM 0.084 . LdBPK_331710.1 278 KSMESMR|VV 0.139 . LdBPK_331710.1 283 MRVVPFK|EQ 0.087 . LdBPK_331710.1 305 NVELALR|NF 0.063 . LdBPK_331710.1 309 ALRNFWK|PS 0.074 . LdBPK_331710.1 330 IAGNVIR|TH 0.090 . LdBPK_331710.1 336 RTHTSLK|LS 0.062 . LdBPK_331710.1 340 SLKLSLR|VP 0.070 . LdBPK_331710.1 349 PLVDAEK|AT 0.064 . LdBPK_331710.1 356 ATQAMAK|LL 0.072 . LdBPK_331710.1 367 NPPYGAK|VW 0.064 . LdBPK_331710.1 385 CATPELK|PW 0.056 . LdBPK_331710.1 397 ALNESSK|MA 0.078 . LdBPK_331710.1 421 FISMLIK|SY 0.112 . LdBPK_331710.1 437 TGVLGPK|SN 0.081 . LdBPK_331710.1 450 NEFLHIK|YA 0.069 . LdBPK_331710.1 453 LHIKYAK|GL 0.079 . LdBPK_331710.1 461 LTFAISR|VV 0.100 . LdBPK_331710.1 468 VVAEHFR|HT 0.096 . LdBPK_331710.1 472 HFRHTLK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >LdBPK_331710.1 ATGAGCGACTTTGACTGGGCTGTGATTCAAAAGGCCGTGGAGGCCGAGTGGGACGCCTCC ATCATTCCTGCGCTGTCCGCCTACATTGAAGTGCCGAATCAGAGCCCCGACTTCGACCCC CAGTGGGCAACGAACGGACTCATAAAAAAGGCCTTTACCATTCTGATCAACTGGATGGAG GGGCAGAACCTGCTGGGCCTCAGCTACGAGTTCATGGAGGTCGAGGGAAGAACGCCGTTC CTCCTCGTCGAAATCGCCGGGACAGAGCCGACGAAGAACACCCTGCTCATGTACGGCCAC ATGGATAAGCAGCCGCCTCTCTACCCGTGGGACGAAGGCCTTGACCCCCACAAGGCGGTC GTGCGCGATGGCAAGCTGTACGGCCGCGGCGGCGCTGACGACGGCTACGCGCTCTTTTCG GCCATCACGTCCGTCTCGGTACTGCAGCGCCACGGCATTCCGCACGGTCGAGTGATCGTG GTCATCGAGGCGTGCGAAGAGTCTGGCAGCTTCGACCTGGACTACTACATGGAGCGCTGC AAGGAACGCATCGGCAACGTGGATTTGATGGTGTGCCTAGACAGCGGCTGTCTCAACTAC TCACAGGTATGGCTGACGACGTCGTTGCGTGGTGTGACGGGTGGTGTGCTGAACGTGCAG ACGCTGACGGAGAGCATGCACAGTGGCGTCGCCGGCGGCGTCGTACCGGACACGTTCCGC ATTGCGCGTGAGCTGTTGGACCGCGTTGAGGATTCAAAGACCGGAAAGGTGCTCTTCCCT GAGGCCTACTGCGAGATTCCCGACTACGTTGTCAAGTCCATGGAGTCGATGAGGGTCGTG CCGTTCAAGGAGCAGTTTGCCACGGCCGACGGCGTGTCGACAGAGCCAGGCGACAATGTG GAGCTGGCGCTGCGGAACTTTTGGAAGCCGAGCCTCACCGTGACAGGGGCCAACCTGCCG GAGCCACAGATTGCCGGCAACGTAATCCGGACGCACACCTCACTGAAGCTGTCCCTCCGC GTGCCGCCGCTGGTGGACGCGGAGAAAGCTACCCAGGCCATGGCCAAGTTGCTTGTGGCC AACCCGCCGTACGGCGCTAAGGTGTGGTTTCAGCCCGAGGTTCCCGGCCATGGCTGCGCG ACCCCAGAGCTGAAGCCGTGGCTCGTGACCGCGCTCAATGAGAGCAGCAAGATGGCGTAC GGCAACCCGCTCGCATTCCAGGGCATGGGCGGGGCGATCCCATTCATCTCCATGCTCATC AAATCATACCCGCAAGCGCAGTTCGTTGTCACCGGCGTCCTCGGTCCAAAGAGCAACGCG CACGGCCCCAATGAGTTTCTGCACATCAAATACGCTAAAGGCCTCACGTTCGCCATCAGC CGCGTTGTCGCCGAGCACTTTCGCCACACTCTCAAGTAA
  • Download Fasta

  • Fasta :-

    MSDFDWAVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWME GQNLLGLSYEFMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLYPWDEGLDPHKAV VRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMRVVPFKEQFATADGVSTEPGDNV ELALRNFWKPSLTVTGANLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKLLVA NPPYGAKVWFQPEVPGHGCATPELKPWLVTALNESSKMAYGNPLAFQGMGGAIPFISMLI KSYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKGLTFAISRVVAEHFRHTLK

  • title: metal binding site
  • coordinates: H100,D133,E166,E167,D194,H441
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_331710.1293 SADGVSTEPG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India