LdBPK_333280.1 | Trypsin-like peptidase domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_333280.1OTHER0.8923650.0853210.022314
No Results

  • Fasta :-

    >LdBPK_333280.1 MAEGAAAVGGAGVLAAASQWRGCCYPILTFLHVPGKMTKPLWLMMGTAFTFRTHEMVEAT YGQPAAPSSLLLTAKHSFSPWDYTKDASQLKIPKEYQKPRFVIGRVYRTDADGRAVAADA VGLRLLAHHPIHDVALLAVDAASLKLLQCATYDSPAHALDLAHEALPLCKEPYPAASDGL LIGFRGAGRLGELDTLDPSVLQRLPPHEREALIKDLQDVEGKQRRATTTVSVLDARGMCK GVGDLATCYHGMSGGPLVTTNGQCAGVLYGHHPDAPGCIGYTPCADFAGWLEEEVQRYRK RCDLH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_333280.1.fa Sequence name : LdBPK_333280 Sequence length : 305 VALUES OF COMPUTED PARAMETERS Coef20 : 3.839 CoefTot : -1.497 ChDiff : -2 ZoneTo : 54 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 1.600 0.149 0.593 MesoH : 0.324 0.504 -0.178 0.298 MuHd_075 : 24.332 17.069 8.383 3.788 MuHd_095 : 29.735 18.550 9.441 6.200 MuHd_100 : 30.624 20.647 10.446 6.629 MuHd_105 : 31.289 24.993 11.143 7.081 Hmax_075 : 15.200 17.600 5.844 4.610 Hmax_095 : 14.900 14.613 5.906 5.470 Hmax_100 : 16.700 15.100 5.099 5.560 Hmax_105 : 17.600 17.700 4.135 5.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9203 0.0797 DFMC : 0.8141 0.1859
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 305 LdBPK_333280.1 MAEGAAAVGGAGVLAAASQWRGCCYPILTFLHVPGKMTKPLWLMMGTAFTFRTHEMVEATYGQPAAPSSLLLTAKHSFSP 80 WDYTKDASQLKIPKEYQKPRFVIGRVYRTDADGRAVAADAVGLRLLAHHPIHDVALLAVDAASLKLLQCATYDSPAHALD 160 LAHEALPLCKEPYPAASDGLLIGFRGAGRLGELDTLDPSVLQRLPPHEREALIKDLQDVEGKQRRATTTVSVLDARGMCK 240 GVGDLATCYHGMSGGPLVTTNGQCAGVLYGHHPDAPGCIGYTPCADFAGWLEEEVQRYRKRCDLH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_333280.1 21 AAASQWR|GC 0.111 . LdBPK_333280.1 36 FLHVPGK|MT 0.071 . LdBPK_333280.1 39 VPGKMTK|PL 0.070 . LdBPK_333280.1 52 GTAFTFR|TH 0.130 . LdBPK_333280.1 75 SLLLTAK|HS 0.062 . LdBPK_333280.1 85 SPWDYTK|DA 0.091 . LdBPK_333280.1 91 KDASQLK|IP 0.059 . LdBPK_333280.1 94 SQLKIPK|EY 0.061 . LdBPK_333280.1 98 IPKEYQK|PR 0.069 . LdBPK_333280.1 100 KEYQKPR|FV 0.174 . LdBPK_333280.1 105 PRFVIGR|VY 0.097 . LdBPK_333280.1 108 VIGRVYR|TD 0.315 . LdBPK_333280.1 114 RTDADGR|AV 0.101 . LdBPK_333280.1 124 ADAVGLR|LL 0.077 . LdBPK_333280.1 145 VDAASLK|LL 0.060 . LdBPK_333280.1 170 EALPLCK|EP 0.058 . LdBPK_333280.1 185 GLLIGFR|GA 0.105 . LdBPK_333280.1 189 GFRGAGR|LG 0.071 . LdBPK_333280.1 203 DPSVLQR|LP 0.095 . LdBPK_333280.1 209 RLPPHER|EA 0.086 . LdBPK_333280.1 214 EREALIK|DL 0.104 . LdBPK_333280.1 222 LQDVEGK|QR 0.060 . LdBPK_333280.1 224 DVEGKQR|RA 0.086 . LdBPK_333280.1 225 VEGKQRR|AT 0.192 . LdBPK_333280.1 236 VSVLDAR|GM 0.115 . LdBPK_333280.1 240 DARGMCK|GV 0.102 . LdBPK_333280.1 297 LEEEVQR|YR 0.081 . LdBPK_333280.1 299 EEVQRYR|KR 0.070 . LdBPK_333280.1 300 EVQRYRK|RC 0.153 . LdBPK_333280.1 301 VQRYRKR|CD 0.176 . ____________________________^_________________

  • Fasta :-

    >LdBPK_333280.1 ATGGCAGAAGGCGCCGCTGCTGTTGGCGGCGCCGGCGTGCTAGCGGCCGCTTCACAGTGG CGCGGCTGCTGTTACCCGATTCTGACCTTCCTGCACGTCCCGGGAAAAATGACGAAGCCT CTGTGGCTCATGATGGGCACCGCCTTTACATTTCGAACCCATGAAATGGTCGAGGCGACA TACGGGCAGCCGGCAGCCCCGTCATCGCTGCTGCTCACAGCGAAGCACTCTTTTTCGCCG TGGGACTACACAAAAGACGCATCGCAGCTGAAGATCCCAAAAGAGTACCAAAAGCCGCGT TTTGTCATTGGCCGCGTGTACCGCACGGATGCAGACGGGAGAGCGGTGGCGGCAGACGCG GTGGGTCTCCGCCTTCTTGCTCACCACCCCATCCACGACGTGGCTCTACTCGCCGTCGAT GCCGCATCGTTGAAGCTGCTGCAGTGCGCTACCTACGATTCACCCGCTCACGCATTGGAC TTGGCGCACGAGGCGCTGCCGCTGTGCAAAGAGCCATATCCCGCGGCATCGGATGGACTG CTGATTGGCTTCCGCGGCGCTGGCCGGCTTGGGGAGCTTGACACGCTGGACCCGTCTGTG CTGCAACGTCTGCCGCCACACGAGCGCGAGGCCCTTATTAAGGATCTGCAGGACGTGGAG GGCAAGCAGAGGCGAGCCACCACTACCGTCTCGGTACTGGACGCGCGGGGCATGTGCAAA GGTGTGGGTGATCTCGCAACATGCTATCACGGCATGTCGGGCGGCCCCCTCGTCACCACA AATGGCCAATGTGCGGGGGTGCTGTACGGCCACCATCCGGATGCGCCCGGGTGCATCGGC TACACACCCTGCGCGGACTTTGCAGGCTGGCTGGAGGAGGAGGTGCAGCGGTACAGGAAG CGGTGCGACTTGCATTGA
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  • Fasta :-

    MAEGAAAVGGAGVLAAASQWRGCCYPILTFLHVPGKMTKPLWLMMGTAFTFRTHEMVEAT YGQPAAPSSLLLTAKHSFSPWDYTKDASQLKIPKEYQKPRFVIGRVYRTDADGRAVAADA VGLRLLAHHPIHDVALLAVDAASLKLLQCATYDSPAHALDLAHEALPLCKEPYPAASDGL LIGFRGAGRLGELDTLDPSVLQRLPPHEREALIKDLQDVEGKQRRATTTVSVLDARGMCK GVGDLATCYHGMSGGPLVTTNGQCAGVLYGHHPDAPGCIGYTPCADFAGWLEEEVQRYRK RCDLH

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_333280.179 SKHSFSPWDY0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India