LdBPK_341750.1 | pyroglutamyl-peptidase I, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:  GO:0016920      

  • Curated_GO_Functions:  pyroglutamyl-peptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_341750.1OTHER0.8129810.1451750.041843
No Results

  • Fasta :-

    >LdBPK_341750.1 MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVENLKRHPDVAEMRYTELDVSVTTVAA YFEKVEREIADIIAEHGAGKVKILLCHLGVHNDTTGLIRIEVQGYNELFASVPDVDGKVL NHEPIVPEDGTIEVFHESWFGKAGSPQLEKLERLIQQVNDTIAESWHHSVTGAVTKNEVT PSDADRKGMVMPAFQAPSWAISRNAGRYLCNCALYHALRLQEKNPGIVYGVFIHVVDPIR GKTESEGGPIVAYNPTTMVQSVQVQRFMHGLLSLMTT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_341750.1.fa Sequence name : LdBPK_341750 Sequence length : 277 VALUES OF COMPUTED PARAMETERS Coef20 : 3.715 CoefTot : -1.272 ChDiff : -7 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.400 0.143 0.614 MesoH : -0.642 0.266 -0.405 0.204 MuHd_075 : 11.055 6.707 3.733 3.053 MuHd_095 : 10.168 7.712 3.399 2.653 MuHd_100 : 11.474 8.771 3.132 2.674 MuHd_105 : 15.924 10.665 4.684 2.255 Hmax_075 : 14.233 13.300 2.954 5.400 Hmax_095 : 16.200 16.100 3.728 4.953 Hmax_100 : 14.400 18.100 2.165 5.900 Hmax_105 : 17.617 13.600 3.344 6.837 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9422 0.0578 DFMC : 0.9282 0.0718
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 277 LdBPK_341750.1 MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVENLKRHPDVAEMRYTELDVSVTTVAAYFEKVEREIADIIAEHGAGK 80 VKILLCHLGVHNDTTGLIRIEVQGYNELFASVPDVDGKVLNHEPIVPEDGTIEVFHESWFGKAGSPQLEKLERLIQQVND 160 TIAESWHHSVTGAVTKNEVTPSDADRKGMVMPAFQAPSWAISRNAGRYLCNCALYHALRLQEKNPGIVYGVFIHVVDPIR 240 GKTESEGGPIVAYNPTTMVQSVQVQRFMHGLLSLMTT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_341750.1 5 --MLHSK|AG 0.067 . LdBPK_341750.1 22 GPFATVK|VN 0.060 . LdBPK_341750.1 32 SSDIALR|VV 0.118 . LdBPK_341750.1 38 RVVENLK|RH 0.056 . LdBPK_341750.1 39 VVENLKR|HP 0.155 . LdBPK_341750.1 47 PDVAEMR|YT 0.096 . LdBPK_341750.1 64 VAAYFEK|VE 0.061 . LdBPK_341750.1 67 YFEKVER|EI 0.102 . LdBPK_341750.1 80 AEHGAGK|VK 0.056 . LdBPK_341750.1 82 HGAGKVK|IL 0.069 . LdBPK_341750.1 99 DTTGLIR|IE 0.073 . LdBPK_341750.1 118 VPDVDGK|VL 0.064 . LdBPK_341750.1 142 HESWFGK|AG 0.110 . LdBPK_341750.1 150 GSPQLEK|LE 0.056 . LdBPK_341750.1 153 QLEKLER|LI 0.117 . LdBPK_341750.1 176 VTGAVTK|NE 0.056 . LdBPK_341750.1 186 TPSDADR|KG 0.107 . LdBPK_341750.1 187 PSDADRK|GM 0.069 . LdBPK_341750.1 203 PSWAISR|NA 0.113 . LdBPK_341750.1 207 ISRNAGR|YL 0.111 . LdBPK_341750.1 219 ALYHALR|LQ 0.092 . LdBPK_341750.1 223 ALRLQEK|NP 0.072 . LdBPK_341750.1 240 HVVDPIR|GK 0.100 . LdBPK_341750.1 242 VDPIRGK|TE 0.067 . LdBPK_341750.1 266 QSVQVQR|FM 0.116 . ____________________________^_________________

  • Fasta :-

    >LdBPK_341750.1 ATGCTGCACTCAAAGGCGGGCATCGTCGTGTTCATCACGGGCTACGGACCCTTCGCCACT GTGAAGGTGAACCCCAGCTCCGACATTGCCCTTCGTGTCGTGGAGAACCTGAAGCGCCAT CCCGACGTAGCGGAGATGCGCTACACGGAGCTGGATGTCAGCGTGACCACCGTCGCGGCG TACTTTGAGAAGGTGGAGAGGGAAATTGCCGACATCATCGCCGAACACGGCGCCGGCAAG GTGAAGATCCTTCTCTGCCACCTAGGTGTTCACAATGACACAACGGGGCTCATCCGCATC GAGGTGCAGGGCTACAACGAGCTCTTTGCCAGCGTCCCTGACGTGGACGGTAAGGTGCTC AACCACGAGCCCATTGTACCGGAGGACGGCACGATCGAAGTATTTCACGAGAGCTGGTTC GGCAAGGCGGGCTCGCCGCAGCTCGAGAAGCTGGAGCGCTTGATTCAGCAGGTGAACGAC ACCATTGCCGAGTCATGGCATCACTCTGTGACGGGTGCCGTGACCAAAAATGAGGTGACA CCCTCGGACGCAGACAGAAAGGGCATGGTGATGCCAGCGTTTCAGGCTCCGAGCTGGGCA ATTTCGCGCAACGCAGGGCGCTACCTGTGCAACTGCGCCCTCTACCACGCACTTCGACTT CAGGAAAAGAATCCGGGCATCGTCTATGGTGTCTTCATTCACGTTGTCGATCCGATTCGC GGCAAGACGGAGAGCGAGGGCGGTCCAATTGTGGCTTACAACCCAACGACAATGGTGCAA TCGGTGCAAGTGCAGCGTTTCATGCACGGCCTGCTGTCTTTGATGACCACGTGA
  • Download Fasta

  • Fasta :-

    MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVENLKRHPDVAEMRYTELDVSVTTVAA YFEKVEREIADIIAEHGAGKVKILLCHLGVHNDTTGLIRIEVQGYNELFASVPDVDGKVL NHEPIVPEDGTIEVFHESWFGKAGSPQLEKLERLIQQVNDTIAESWHHSVTGAVTKNEVT PSDADRKGMVMPAFQAPSWAISRNAGRYLCNCALYHALRLQEKNPGIVYGVFIHVVDPIR GKTESEGGPIVAYNPTTMVQSVQVQRFMHGLLSLMTT

  • title: catalytic triad
  • coordinates: E101,C210,H234
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India