LdBPK_351580.1 | metacaspase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0051286      GO:0097014      GO:0005737      GO:0031981      

  • Curated_GO_Components:  cell tip      ciliary plasm      cytoplasm      nuclear lumen      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_351580.1OTHER0.5837770.4121600.004063
No Results

  • Fasta :-

    >LdBPK_351580.1 MADLLDILGIGAVASLIPMLANGLLLVDRPKRVDINAGRRLIHTVRPIIPYRAPVPYTGG RVRALFIGINYTGMRNALRGCVNDVSSMLGTLQQISFPISECCILVDDPSFPGFCGMPTR DNIIKHMLWLTGDVRPGDVLFFHFSGHGGQTKATRDSEEKYDQCLIPLDHVKNGSILDDD LFLMLVAPLPSGVRMTCVFDCCHSASMLDLPFSYVAPRVGGGGAREYMQQVRRGNFSNGD VVMFSGCTDSGTSADVQNGGHANGAATLAFTWSLLNTHGFSYLNILLKTREELRKKGRVQ VPQLTSSKPIDLYKPFSLFGMITVNASMMHCVPQQYQQRPQSLPPQAMPPPAGYPVHVPP PPQGYYPPPQRPGWGLGYPAPGYPAQGIPVQQATLGVSRCPPSQYLPAPPPALYAPPPPG QHGPPQPPPAQYTFSPLPPR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_351580.1.fa Sequence name : LdBPK_351580 Sequence length : 440 VALUES OF COMPUTED PARAMETERS Coef20 : 3.998 CoefTot : 0.141 ChDiff : 7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.682 2.088 0.286 0.746 MesoH : -0.059 0.522 -0.185 0.236 MuHd_075 : 4.159 4.388 0.854 1.276 MuHd_095 : 21.386 14.696 4.600 3.481 MuHd_100 : 18.652 6.569 3.079 1.384 MuHd_105 : 19.126 5.385 3.089 2.053 Hmax_075 : 14.583 17.100 2.946 5.623 Hmax_095 : 17.587 20.475 3.609 6.598 Hmax_100 : 16.800 18.100 2.797 5.660 Hmax_105 : 14.800 18.667 3.512 6.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9751 0.0249 DFMC : 0.9894 0.0106
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 440 LdBPK_351580.1 MADLLDILGIGAVASLIPMLANGLLLVDRPKRVDINAGRRLIHTVRPIIPYRAPVPYTGGRVRALFIGINYTGMRNALRG 80 CVNDVSSMLGTLQQISFPISECCILVDDPSFPGFCGMPTRDNIIKHMLWLTGDVRPGDVLFFHFSGHGGQTKATRDSEEK 160 YDQCLIPLDHVKNGSILDDDLFLMLVAPLPSGVRMTCVFDCCHSASMLDLPFSYVAPRVGGGGAREYMQQVRRGNFSNGD 240 VVMFSGCTDSGTSADVQNGGHANGAATLAFTWSLLNTHGFSYLNILLKTREELRKKGRVQVPQLTSSKPIDLYKPFSLFG 320 MITVNASMMHCVPQQYQQRPQSLPPQAMPPPAGYPVHVPPPPQGYYPPPQRPGWGLGYPAPGYPAQGIPVQQATLGVSRC 400 PPSQYLPAPPPALYAPPPPGQHGPPQPPPAQYTFSPLPPR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_351580.1 29 GLLLVDR|PK 0.080 . LdBPK_351580.1 31 LLVDRPK|RV 0.072 . LdBPK_351580.1 32 LVDRPKR|VD 0.384 . LdBPK_351580.1 39 VDINAGR|RL 0.077 . LdBPK_351580.1 40 DINAGRR|LI 0.161 . LdBPK_351580.1 46 RLIHTVR|PI 0.105 . LdBPK_351580.1 52 RPIIPYR|AP 0.096 . LdBPK_351580.1 61 VPYTGGR|VR 0.069 . LdBPK_351580.1 63 YTGGRVR|AL 0.113 . LdBPK_351580.1 75 INYTGMR|NA 0.089 . LdBPK_351580.1 79 GMRNALR|GC 0.087 . LdBPK_351580.1 120 FCGMPTR|DN 0.112 . LdBPK_351580.1 125 TRDNIIK|HM 0.069 . LdBPK_351580.1 135 WLTGDVR|PG 0.076 . LdBPK_351580.1 152 GHGGQTK|AT 0.084 . LdBPK_351580.1 155 GQTKATR|DS 0.149 . LdBPK_351580.1 160 TRDSEEK|YD 0.064 . LdBPK_351580.1 172 IPLDHVK|NG 0.066 . LdBPK_351580.1 194 PLPSGVR|MT 0.070 . LdBPK_351580.1 218 FSYVAPR|VG 0.104 . LdBPK_351580.1 225 VGGGGAR|EY 0.104 . LdBPK_351580.1 232 EYMQQVR|RG 0.073 . LdBPK_351580.1 233 YMQQVRR|GN 0.164 . LdBPK_351580.1 288 YLNILLK|TR 0.061 . LdBPK_351580.1 290 NILLKTR|EE 0.066 . LdBPK_351580.1 294 KTREELR|KK 0.095 . LdBPK_351580.1 295 TREELRK|KG 0.099 . LdBPK_351580.1 296 REELRKK|GR 0.089 . LdBPK_351580.1 298 ELRKKGR|VQ 0.114 . LdBPK_351580.1 308 PQLTSSK|PI 0.061 . LdBPK_351580.1 314 KPIDLYK|PF 0.072 . LdBPK_351580.1 339 PQQYQQR|PQ 0.086 . LdBPK_351580.1 371 YYPPPQR|PG 0.069 . LdBPK_351580.1 399 ATLGVSR|CP 0.067 . LdBPK_351580.1 440 FSPLPPR|-- 0.089 . ____________________________^_________________

  • Fasta :-

    >LdBPK_351580.1 ATGGCAGACCTTCTTGATATTTTGGGGATAGGGGCCGTCGCCAGTCTGATCCCGATGCTC GCGAACGGTCTTCTCCTGGTTGATCGGCCCAAACGGGTCGACATTAATGCCGGAAGGCGG CTCATTCACACAGTGCGGCCCATAATTCCTTACCGTGCCCCGGTGCCGTACACCGGCGGC CGTGTCCGTGCGCTTTTCATAGGAATCAACTACACAGGTATGCGCAACGCACTGCGTGGC TGCGTCAACGATGTTAGCTCGATGCTGGGTACGCTGCAGCAGATCTCCTTCCCGATTAGC GAGTGCTGCATCCTCGTCGACGACCCGTCGTTCCCCGGCTTCTGCGGCATGCCCACCCGC GACAACATCATCAAACACATGCTGTGGCTGACCGGCGACGTACGCCCCGGTGATGTGCTT TTTTTTCACTTCTCCGGCCACGGCGGGCAAACCAAGGCGACTCGAGACTCGGAAGAGAAG TACGACCAGTGTCTCATCCCACTCGACCACGTGAAGAACGGCAGCATTCTCGATGATGAT CTCTTCCTCATGCTCGTAGCCCCGCTGCCGTCTGGGGTGCGCATGACGTGCGTCTTTGAC TGCTGTCACTCAGCTAGCATGCTGGATCTACCCTTCAGCTACGTGGCGCCGAGAGTAGGC GGCGGCGGGGCACGCGAGTACATGCAACAGGTACGCCGCGGCAACTTCTCGAACGGCGAC GTTGTCATGTTCAGCGGGTGCACGGATAGCGGCACCAGCGCAGATGTGCAGAACGGCGGC CACGCGAACGGTGCCGCCACTCTCGCCTTCACGTGGTCTCTTCTGAACACGCACGGGTTC TCCTACCTTAATATCCTTCTCAAGACACGAGAGGAGCTGCGCAAAAAGGGTCGGGTGCAG GTGCCGCAGCTCACGAGCTCGAAGCCGATCGACCTGTACAAGCCCTTCTCCCTCTTCGGC ATGATTACGGTAAACGCTTCCATGATGCATTGCGTGCCGCAGCAGTACCAGCAACGTCCG CAGAGCCTCCCGCCGCAGGCGATGCCGCCTCCGGCGGGTTACCCAGTCCACGTACCGCCG CCGCCGCAAGGCTACTACCCTCCGCCGCAGCGTCCAGGTTGGGGCCTTGGCTACCCAGCG CCGGGATACCCGGCGCAAGGGATACCGGTGCAGCAGGCGACTCTTGGTGTCTCGCGGTGT CCACCATCGCAGTACTTACCTGCGCCTCCGCCAGCACTGTATGCGCCACCTCCACCCGGG CAGCACGGGCCACCGCAGCCCCCGCCAGCCCAGTACACGTTTAGCCCACTCCCGCCTCGC TAA
  • Download Fasta

  • Fasta :-

    MADLLDILGIGAVASLIPMLANGLLLVDRPKRVDINAGRRLIHTVRPIIPYRAPVPYTGG RVRALFIGINYTGMRNALRGCVNDVSSMLGTLQQISFPISECCILVDDPSFPGFCGMPTR DNIIKHMLWLTGDVRPGDVLFFHFSGHGGQTKATRDSEEKYDQCLIPLDHVKNGSILDDD LFLMLVAPLPSGVRMTCVFDCCHSASMLDLPFSYVAPRVGGGGAREYMQQVRRGNFSNGD VVMFSGCTDSGTSADVQNGGHANGAATLAFTWSLLNTHGFSYLNILLKTREELRKKGRVQ VPQLTSSKPIDLYKPFSLFGMITVNASMMHCVPQQYQQRPQSLPPQAMPPPAGYPVHVPP PPQGYYPPPQRPGWGLGYPAPGYPAQGIPVQQATLGVSRCPPSQYLPAPPPALYAPPPPG QHGPPQPPPAQYTFSPLPPR

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IDSitePeptideScoreMethod
LdBPK_351580.1157 SATRDSEEKY0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India