LdBPK_354070.1 | Bem46-like serine peptidase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005783      

  • Curated_GO_Components:  endoplasmic reticulum      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_354070.1OTHER0.9952690.0043090.000422
No Results

  • Fasta :-

    >LdBPK_354070.1 MSFGGFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNRLLYYPQIPPESREVCEDPVTLG IPYAERVCVTTADKVRLSGYMLWPAPAPSTEKSGNASVPESIGRASSNAATAEGGTHAEV DASGGATDSTSAGSVVPGSSRSVTMSSGMPSFVMLYFHGNAGNVGHRLPLAQAFVAHLKC AVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL AANERYARRIAAVIVENSFSSISDMASALSRPILTKLASQCPGLAVGIFEYYVKPLALRI SWNSAQKITKVVVPMLFLSGMRDEIVPPEQMRTLYKAATKCLRDGNGSDLTVPLRRFLEF EDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_354070.1.fa Sequence name : LdBPK_354070 Sequence length : 394 VALUES OF COMPUTED PARAMETERS Coef20 : 4.320 CoefTot : -0.787 ChDiff : -2 ZoneTo : 47 KR : 3 DE : 0 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 2.606 0.424 0.861 MesoH : 0.201 0.672 -0.200 0.273 MuHd_075 : 22.796 14.248 5.789 4.853 MuHd_095 : 22.708 16.710 5.268 5.276 MuHd_100 : 17.460 15.505 4.755 4.421 MuHd_105 : 16.008 14.290 4.427 3.756 Hmax_075 : 19.717 -1.750 -0.210 6.953 Hmax_095 : 9.887 9.188 0.099 3.824 Hmax_100 : 7.600 8.200 -0.806 2.600 Hmax_105 : 0.800 10.900 -0.186 7.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8794 0.1206 DFMC : 0.8782 0.1218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 394 LdBPK_354070.1 MSFGGFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNRLLYYPQIPPESREVCEDPVTLGIPYAERVCVTTADKVRLSGY 80 MLWPAPAPSTEKSGNASVPESIGRASSNAATAEGGTHAEVDASGGATDSTSAGSVVPGSSRSVTMSSGMPSFVMLYFHGN 160 AGNVGHRLPLAQAFVAHLKCAVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL 240 AANERYARRIAAVIVENSFSSISDMASALSRPILTKLASQCPGLAVGIFEYYVKPLALRISWNSAQKITKVVVPMLFLSG 320 MRDEIVPPEQMRTLYKAATKCLRDGNGSDLTVPLRRFLEFEDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_354070.1 31 LHIMSYR|YR 0.120 . LdBPK_354070.1 33 IMSYRYR|SQ 0.133 . LdBPK_354070.1 38 YRSQQNR|LL 0.100 . LdBPK_354070.1 50 QIPPESR|EV 0.106 . LdBPK_354070.1 66 GIPYAER|VC 0.065 . LdBPK_354070.1 74 CVTTADK|VR 0.051 . LdBPK_354070.1 76 TTADKVR|LS 0.111 . LdBPK_354070.1 92 PAPSTEK|SG 0.072 . LdBPK_354070.1 104 VPESIGR|AS 0.102 . LdBPK_354070.1 141 VVPGSSR|SV 0.165 . LdBPK_354070.1 167 AGNVGHR|LP 0.074 . LdBPK_354070.1 179 AFVAHLK|CA 0.064 . LdBPK_354070.1 188 VMMVDYR|GF 0.108 . LdBPK_354070.1 219 YLWQDPR|VP 0.074 . LdBPK_354070.1 222 QDPRVPR|DR 0.354 . LdBPK_354070.1 224 PRVPRDR|II 0.105 . LdBPK_354070.1 245 HLAANER|YA 0.108 . LdBPK_354070.1 248 ANERYAR|RI 0.253 . LdBPK_354070.1 249 NERYARR|IA 0.161 . LdBPK_354070.1 271 MASALSR|PI 0.133 . LdBPK_354070.1 276 SRPILTK|LA 0.087 . LdBPK_354070.1 294 IFEYYVK|PL 0.058 . LdBPK_354070.1 299 VKPLALR|IS 0.069 . LdBPK_354070.1 307 SWNSAQK|IT 0.074 . LdBPK_354070.1 310 SAQKITK|VV 0.084 . LdBPK_354070.1 322 LFLSGMR|DE 0.076 . LdBPK_354070.1 332 VPPEQMR|TL 0.095 . LdBPK_354070.1 336 QMRTLYK|AA 0.094 . LdBPK_354070.1 340 LYKAATK|CL 0.069 . LdBPK_354070.1 343 AATKCLR|DG 0.091 . LdBPK_354070.1 355 DLTVPLR|RF 0.073 . LdBPK_354070.1 356 LTVPLRR|FL 0.157 . LdBPK_354070.1 364 LEFEDGR|HN 0.074 . LdBPK_354070.1 386 DFVTDVR|NA 0.090 . ____________________________^_________________

  • Fasta :-

    >LdBPK_354070.1 ATGAGCTTTGGCGGCTTTCTTCTCTCGGCCGGACTCTACTTGGTCCTGGTCGCCGTATTT GTGTCGCTCTTTCTGCACATCATGAGCTACCGCTACCGAAGTCAGCAGAACCGGCTTCTC TACTACCCACAGATTCCTCCAGAGAGCCGAGAGGTCTGCGAAGACCCGGTGACGCTCGGC ATCCCCTATGCAGAGCGTGTGTGTGTCACCACTGCTGATAAAGTACGATTGTCGGGCTAC ATGCTATGGCCAGCACCTGCACCGTCCACGGAAAAGAGCGGCAATGCAAGCGTCCCCGAA TCGATCGGGCGCGCATCCTCGAATGCGGCCACCGCAGAGGGAGGCACGCATGCAGAGGTG GATGCATCAGGTGGCGCTACAGACAGTACCAGCGCCGGCAGCGTGGTGCCTGGCAGCAGC AGAAGCGTTACCATGTCGAGCGGGATGCCGAGTTTTGTGATGCTGTACTTTCACGGAAAC GCCGGTAACGTCGGCCATCGCCTGCCTCTTGCTCAGGCCTTTGTGGCCCACCTGAAGTGC GCGGTCATGATGGTTGACTATCGCGGTTTTGGCCTTAGCGATGACTCGGAGCAGACACAG GAGACGTTGGAGCTGGATGCGCAGGCCTGCTTCGACTATCTGTGGCAGGATCCTCGTGTG CCGCGTGATCGTATCATCGTCATGGGCACCAGCCTCGGTGGCGCTGTTTCGATTCACTTG GCTGCCAACGAGCGGTACGCCCGCCGCATAGCTGCTGTGATTGTAGAAAACTCCTTCAGC TCCATTAGCGACATGGCCTCTGCACTGAGCCGGCCAATCCTGACGAAGCTGGCGAGTCAA TGCCCAGGCCTTGCGGTGGGTATCTTCGAGTACTACGTCAAGCCCCTGGCTCTGCGGATA AGTTGGAACAGCGCGCAGAAGATTACTAAGGTTGTGGTGCCGATGCTCTTCCTCTCTGGT ATGCGTGATGAGATAGTGCCACCGGAGCAGATGCGGACACTATACAAGGCCGCGACGAAG TGTCTGCGCGATGGCAACGGTAGCGACCTCACCGTCCCGCTGCGTCGCTTTCTCGAGTTT GAGGACGGGCGCCACAACAACCTGCCGCTGATGCCCGGTTACATGAGCGCCCTGCAGGAC TTTGTCACGGACGTGCGCAACGCCGGAGCTGCTGCTGTCGTTTGA
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  • Fasta :-

    MSFGGFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNRLLYYPQIPPESREVCEDPVTLG IPYAERVCVTTADKVRLSGYMLWPAPAPSTEKSGNASVPESIGRASSNAATAEGGTHAEV DASGGATDSTSAGSVVPGSSRSVTMSSGMPSFVMLYFHGNAGNVGHRLPLAQAFVAHLKC AVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL AANERYARRIAAVIVENSFSSISDMASALSRPILTKLASQCPGLAVGIFEYYVKPLALRI SWNSAQKITKVVVPMLFLSGMRDEIVPPEQMRTLYKAATKCLRDGNGSDLTVPLRRFLEF EDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India