LdBPK_361770.1 | Peptidase M76 family, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_361770.1OTHER0.9998270.0001520.000021
No Results

  • Fasta :-

    >LdBPK_361770.1 MGLLSSSSSSSSSAGTGAGAAAAQTDAQEVKRVDSLYNPHDVCEAAVDYVLRHVNTVQYM IQSIEEITGKPFLRDRIKCLPAVPRGEASCNSAMGLTPDRVLAGYMWRSARPDCQAKDVV LLEDHIARLFNTKHAAAFLKKDKAVNERAASPPTTSDATAAAASLPSTTATQSQLLRLLA GSQLPVLEQVERNIRHELVHAFDDARGAIESSDCVHQACSEIRAARLSGDCFVGQEMRKG RFNFFEGGQKCVRRRAVMAVDRNPVCRGFSERAVDTVFQKCYSDYEPFAAPIYALGSYGD SQFANGTLKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_361770.1.fa Sequence name : LdBPK_361770 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 4.227 CoefTot : 0.943 ChDiff : 1 ZoneTo : 25 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.188 0.688 0.069 0.404 MesoH : -0.973 0.031 -0.461 0.063 MuHd_075 : 4.984 10.035 1.655 2.476 MuHd_095 : 5.824 8.472 2.480 2.548 MuHd_100 : 5.367 10.303 2.047 2.427 MuHd_105 : 5.042 9.770 1.685 2.656 Hmax_075 : 8.200 8.800 0.477 2.958 Hmax_095 : 8.600 7.700 1.269 3.535 Hmax_100 : 9.200 9.200 1.026 3.560 Hmax_105 : 11.600 7.200 0.990 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8392 0.1608 DFMC : 0.6317 0.3683
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 LdBPK_361770.1 MGLLSSSSSSSSSAGTGAGAAAAQTDAQEVKRVDSLYNPHDVCEAAVDYVLRHVNTVQYMIQSIEEITGKPFLRDRIKCL 80 PAVPRGEASCNSAMGLTPDRVLAGYMWRSARPDCQAKDVVLLEDHIARLFNTKHAAAFLKKDKAVNERAASPPTTSDATA 160 AAASLPSTTATQSQLLRLLAGSQLPVLEQVERNIRHELVHAFDDARGAIESSDCVHQACSEIRAARLSGDCFVGQEMRKG 240 RFNFFEGGQKCVRRRAVMAVDRNPVCRGFSERAVDTVFQKCYSDYEPFAAPIYALGSYGDSQFANGTLKL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_361770.1 31 TDAQEVK|RV 0.078 . LdBPK_361770.1 32 DAQEVKR|VD 0.151 . LdBPK_361770.1 52 AVDYVLR|HV 0.151 . LdBPK_361770.1 70 IEEITGK|PF 0.058 . LdBPK_361770.1 74 TGKPFLR|DR 0.143 . LdBPK_361770.1 76 KPFLRDR|IK 0.068 . LdBPK_361770.1 78 FLRDRIK|CL 0.077 . LdBPK_361770.1 85 CLPAVPR|GE 0.086 . LdBPK_361770.1 100 MGLTPDR|VL 0.073 . LdBPK_361770.1 108 LAGYMWR|SA 0.154 . LdBPK_361770.1 111 YMWRSAR|PD 0.370 . LdBPK_361770.1 117 RPDCQAK|DV 0.105 . LdBPK_361770.1 128 LEDHIAR|LF 0.086 . LdBPK_361770.1 133 ARLFNTK|HA 0.074 . LdBPK_361770.1 140 HAAAFLK|KD 0.070 . LdBPK_361770.1 141 AAAFLKK|DK 0.141 . LdBPK_361770.1 143 AFLKKDK|AV 0.071 . LdBPK_361770.1 148 DKAVNER|AA 0.130 . LdBPK_361770.1 177 TQSQLLR|LL 0.098 . LdBPK_361770.1 192 VLEQVER|NI 0.098 . LdBPK_361770.1 195 QVERNIR|HE 0.120 . LdBPK_361770.1 206 HAFDDAR|GA 0.115 . LdBPK_361770.1 223 QACSEIR|AA 0.119 . LdBPK_361770.1 226 SEIRAAR|LS 0.403 . LdBPK_361770.1 238 FVGQEMR|KG 0.071 . LdBPK_361770.1 239 VGQEMRK|GR 0.079 . LdBPK_361770.1 241 QEMRKGR|FN 0.451 . LdBPK_361770.1 250 FFEGGQK|CV 0.060 . LdBPK_361770.1 253 GGQKCVR|RR 0.067 . LdBPK_361770.1 254 GQKCVRR|RA 0.172 . LdBPK_361770.1 255 QKCVRRR|AV 0.366 . LdBPK_361770.1 262 AVMAVDR|NP 0.072 . LdBPK_361770.1 267 DRNPVCR|GF 0.143 . LdBPK_361770.1 272 CRGFSER|AV 0.282 . LdBPK_361770.1 280 VDTVFQK|CY 0.075 . LdBPK_361770.1 309 FANGTLK|L- 0.062 . ____________________________^_________________

  • Fasta :-

    >LdBPK_361770.1 ATGGGCTTGCTCTCCTCTTCCTCATCCTCGTCCTCCTCCGCGGGAACTGGTGCTGGTGCA GCGGCGGCTCAAACAGACGCACAGGAGGTGAAGCGCGTCGACTCGCTCTACAACCCGCAC GATGTCTGCGAGGCCGCCGTAGACTACGTTCTGCGTCACGTGAACACGGTTCAGTACATG ATTCAGAGCATTGAAGAGATCACCGGCAAGCCCTTCCTGCGCGACCGCATCAAGTGCCTG CCCGCTGTCCCACGTGGTGAGGCCTCCTGCAACTCCGCGATGGGACTTACCCCAGATCGG GTGCTTGCGGGGTACATGTGGCGCAGTGCCCGCCCCGACTGCCAGGCCAAAGATGTCGTG CTACTGGAGGATCACATTGCCCGTCTTTTTAACACAAAGCACGCAGCGGCATTCTTGAAG AAGGACAAGGCTGTCAACGAGCGCGCGGCCTCGCCACCGACGACATCGGATGCCACTGCA GCGGCGGCATCTTTACCGTCCACAACCGCCACGCAATCACAGCTGCTTCGCCTCCTCGCG GGATCGCAGCTGCCGGTGTTGGAGCAGGTTGAGCGCAACATACGCCACGAGCTTGTCCAT GCCTTCGATGATGCTCGGGGTGCGATTGAAAGCTCCGACTGCGTGCATCAGGCCTGCAGC GAGATTCGTGCGGCACGTCTTAGCGGTGACTGTTTTGTCGGCCAAGAGATGCGGAAGGGG CGCTTCAACTTCTTTGAGGGTGGGCAGAAGTGCGTCCGCCGCCGTGCCGTCATGGCGGTC GATCGCAATCCGGTGTGTCGCGGCTTCTCTGAGCGCGCGGTGGACACGGTGTTTCAGAAG TGCTACTCTGACTACGAGCCCTTCGCAGCACCCATCTATGCCCTCGGGAGCTACGGCGAC AGCCAGTTTGCAAATGGCACGCTGAAGCTATGA
  • Download Fasta

  • Fasta :-

    MGLLSSSSSSSSSAGTGAGAAAAQTDAQEVKRVDSLYNPHDVCEAAVDYVLRHVNTVQYM IQSIEEITGKPFLRDRIKCLPAVPRGEASCNSAMGLTPDRVLAGYMWRSARPDCQAKDVV LLEDHIARLFNTKHAAAFLKKDKAVNERAASPPTTSDATAAAASLPSTTATQSQLLRLLA GSQLPVLEQVERNIRHELVHAFDDARGAIESSDCVHQACSEIRAARLSGDCFVGQEMRKG RFNFFEGGQKCVRRRAVMAVDRNPVCRGFSERAVDTVFQKCYSDYEPFAAPIYALGSYGD SQFANGTLKL

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India