LdBPK_366520.1 | carboxypeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004181      

  • Computed_GO_Functions:  metallocarboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_366520.1OTHER0.9814240.0076670.010909
No Results

  • Fasta :-

    >LdBPK_366520.1 MVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAENDIAAWLPTLQELVDLEREEGCLR AGTSGKSPYGALLGANEPGMTVAKLDAIYADIKSWLPALYKEVLENRKDVGASLTELQTP ISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGGMLKEYVRMTYYWSPDNYTKCLLAT IHETGNAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERMIAMSAAFAEYLAPLLELH LGAQPGLTVKNVRKINQLVKPSCIRKLADEVGYSLSLHVILRYEIERNLIEGRLEAANVP RVWDEKMKEYMGLETLGRDDLGCLKGIHWDAGYWAGFPAYTIGTVAQCLLPPRPQARRAA AEWCSRLSSVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_366520.1.fa Sequence name : LdBPK_366520 Sequence length : 371 VALUES OF COMPUTED PARAMETERS Coef20 : 4.345 CoefTot : 0.018 ChDiff : -1 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.335 0.178 0.556 MesoH : -0.768 0.373 -0.418 0.176 MuHd_075 : 33.921 19.054 6.733 7.646 MuHd_095 : 51.692 26.697 12.624 9.706 MuHd_100 : 52.135 25.367 11.634 9.887 MuHd_105 : 39.375 19.477 8.460 7.490 Hmax_075 : -5.513 6.913 -2.552 1.680 Hmax_095 : 16.000 19.200 2.931 6.240 Hmax_100 : 10.200 14.400 0.146 4.280 Hmax_105 : 7.800 9.537 -0.525 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1475 0.8525 DFMC : 0.3052 0.6948 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.2000 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 371 LdBPK_366520.1 MVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAENDIAAWLPTLQELVDLEREEGCLRAGTSGKSPYGALLGANEPGM 80 TVAKLDAIYADIKSWLPALYKEVLENRKDVGASLTELQTPISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGGMLKE 160 YVRMTYYWSPDNYTKCLLATIHETGNAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERMIAMSAAFAEYLAPLLELH 240 LGAQPGLTVKNVRKINQLVKPSCIRKLADEVGYSLSLHVILRYEIERNLIEGRLEAANVPRVWDEKMKEYMGLETLGRDD 320 LGCLKGIHWDAGYWAGFPAYTIGTVAQCLLPPRPQARRAAAEWCSRLSSVL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_366520.1 3 ----MVR|LH 0.070 . LdBPK_366520.1 17 LPEELLR|RR 0.067 . LdBPK_366520.1 18 PEELLRR|RT 0.085 . LdBPK_366520.1 19 EELLRRR|TR 0.087 . LdBPK_366520.1 21 LLRRRTR|LT 0.275 . LdBPK_366520.1 32 AQQLWVK|CR 0.057 . LdBPK_366520.1 34 QLWVKCR|AE 0.119 . LdBPK_366520.1 54 ELVDLER|EE 0.075 . LdBPK_366520.1 60 REEGCLR|AG 0.068 . LdBPK_366520.1 66 RAGTSGK|SP 0.094 . LdBPK_366520.1 84 PGMTVAK|LD 0.060 . LdBPK_366520.1 93 AIYADIK|SW 0.075 . LdBPK_366520.1 101 WLPALYK|EV 0.067 . LdBPK_366520.1 107 KEVLENR|KD 0.072 . LdBPK_366520.1 108 EVLENRK|DV 0.153 . LdBPK_366520.1 123 LQTPISK|EK 0.058 . LdBPK_366520.1 125 TPISKEK|QI 0.079 . LdBPK_366520.1 131 KQIALGR|QL 0.083 . LdBPK_366520.1 139 LMTDVWK|YD 0.070 . LdBPK_366520.1 146 YDWGAGR|YD 0.093 . LdBPK_366520.1 159 PFGGMLK|EY 0.054 . LdBPK_366520.1 163 MLKEYVR|MT 0.079 . LdBPK_366520.1 175 SPDNYTK|CL 0.067 . LdBPK_366520.1 188 HETGNAK|YE 0.064 . LdBPK_366520.1 196 EQNCGPR|EL 0.092 . LdBPK_366520.1 207 QPVCEAR|SG 0.233 . LdBPK_366520.1 221 QSLLAER|MI 0.081 . LdBPK_366520.1 250 QPGLTVK|NV 0.078 . LdBPK_366520.1 253 LTVKNVR|KI 0.093 . LdBPK_366520.1 254 TVKNVRK|IN 0.091 . LdBPK_366520.1 260 KINQLVK|PS 0.060 . LdBPK_366520.1 265 VKPSCIR|KL 0.082 . LdBPK_366520.1 266 KPSCIRK|LA 0.162 . LdBPK_366520.1 282 SLHVILR|YE 0.088 . LdBPK_366520.1 287 LRYEIER|NL 0.098 . LdBPK_366520.1 293 RNLIEGR|LE 0.076 . LdBPK_366520.1 301 EAANVPR|VW 0.124 . LdBPK_366520.1 306 PRVWDEK|MK 0.069 . LdBPK_366520.1 308 VWDEKMK|EY 0.069 . LdBPK_366520.1 318 GLETLGR|DD 0.111 . LdBPK_366520.1 325 DDLGCLK|GI 0.059 . LdBPK_366520.1 353 QCLLPPR|PQ 0.068 . LdBPK_366520.1 357 PPRPQAR|RA 0.150 . LdBPK_366520.1 358 PRPQARR|AA 0.145 . LdBPK_366520.1 366 AAEWCSR|LS 0.078 . ____________________________^_________________

  • Fasta :-

    >LdBPK_366520.1 ATGGTGCGCCTGCACGAGCTTGCGTCGCAGCTGCCGGAGGAGCTGCTGCGGCGCAGGACG CGGCTGACAACGCTGGCGCAGCAGCTGTGGGTAAAATGCCGCGCGGAAAACGACATTGCT GCGTGGCTGCCGACGCTGCAGGAGCTGGTGGACCTCGAGCGCGAGGAGGGCTGCCTTCGA GCCGGCACAAGCGGGAAGTCCCCGTACGGCGCGCTGCTCGGCGCCAACGAGCCCGGGATG ACGGTTGCGAAGCTGGACGCAATCTACGCGGACATCAAGTCTTGGCTGCCAGCGCTGTAC AAGGAGGTGCTGGAGAACCGAAAGGACGTGGGCGCGAGCCTCACTGAGCTGCAGACGCCG ATCTCGAAGGAAAAGCAGATTGCTCTTGGCCGGCAGCTGATGACGGACGTGTGGAAGTAC GACTGGGGCGCGGGTCGCTACGACGAGGCGCCGCACCCGTTTGGTGGGATGCTGAAGGAG TACGTGCGGATGACGTACTACTGGTCGCCGGACAACTACACCAAGTGCCTGCTGGCGACG ATCCACGAGACAGGAAACGCCAAATACGAGCAGAACTGCGGGCCGCGCGAGCTGCTTGGG CAGCCGGTGTGCGAGGCGCGATCCGGCGGCATCCACGAGACGCAGTCGCTGCTGGCGGAG AGGATGATAGCCATGTCCGCTGCGTTCGCCGAGTACCTGGCGCCGCTGCTGGAGCTGCAC CTTGGCGCGCAGCCAGGGCTGACGGTGAAGAACGTGCGCAAGATCAACCAGCTGGTGAAG CCGAGCTGCATCCGGAAGCTCGCAGACGAGGTGGGTTACTCTCTCTCTCTCCACGTGATC CTGCGCTACGAGATCGAGCGCAACCTGATCGAGGGGCGCCTGGAGGCGGCGAACGTGCCG CGGGTGTGGGATGAAAAGATGAAGGAGTACATGGGCCTGGAGACGCTTGGGCGCGACGAC CTCGGGTGCCTAAAGGGCATTCACTGGGATGCCGGCTACTGGGCAGGCTTTCCCGCCTAC ACGATCGGCACCGTCGCCCAGTGTCTCCTTCCTCCCCGCCCCCAAGCTCGACGAGCTGCT GCTGAATGGTGCTCGCGGCTCTCCTCTGTTCTGTAG
  • Download Fasta

  • Fasta :-

    MVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAENDIAAWLPTLQELVDLEREEGCLR AGTSGKSPYGALLGANEPGMTVAKLDAIYADIKSWLPALYKEVLENRKDVGASLTELQTP ISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGGMLKEYVRMTYYWSPDNYTKCLLAT IHETGNAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERMIAMSAAFAEYLAPLLELH LGAQPGLTVKNVRKINQLVKPSCIRKLADEVGYSLSLHVILRYEIERNLIEGRLEAANVP RVWDEKMKEYMGLETLGRDDLGCLKGIHWDAGYWAGFPAYTIGTVAQCLLPPRPQARRAA AEWCSRLSSVL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_366520.167 STSGKSPYGA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India