LmjF.02.0040 | Xaa-Pro aminopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.02.0040OTHER0.9680830.0038910.028027
No Results

  • Fasta :-

    >LmjF.02.0040 MIMKASGAAVLHAVREKMQEATVAALIVTSSDAHNSEYVATHLQSRAFISHFQGSAGTAL ITMEKALLWTDGRYWLAAEEEKYPEFDLMKQGQPEVPSLEEWIAANLGSKAVVGMSPYVA TVAEWERLSKKINLRPVANIVQDMMPPEKSVRKMYVRPAEFCGATCQERRAAILAELEKK DCDMIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDKHYENVRLYVNLDKVTDAVRQAC EDHIDFYPYEQFEADLKQLPRGRKALVDERQTSEAVFRILKDVGTVTVRVVCGPAQKLKA IKNEVELKGFRDCHVRDGAALTRYLAWLHDQVANKGVTDLNEYDAATKLEEFRAQGEHFV QLSFGSISSIGPNGAMCHYSPAETGSAAIRRDQLYLIDSGAHYWDGTTDVTRTICFTAPS DEQREAYTLVLKGHIALNSIIFPKGTSGVRLDTLARMALWGVGLDYAHGTGHGVGSFLNV HEGPHGISTRPVATGANMELHSIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYT MSHLTMAPLCRDLIDVSLLTETERAWVDRYHAKVVASIMPHLQQAGDQNAVEYLKYHTRP LFAVNEAYTLLSPDGKGAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/458 Sequence name : 458 Sequence length : 619 VALUES OF COMPUTED PARAMETERS Coef20 : 4.007 CoefTot : 0.331 ChDiff : -15 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.276 0.056 0.522 MesoH : -0.193 0.270 -0.329 0.260 MuHd_075 : 7.415 7.526 3.161 0.906 MuHd_095 : 26.172 18.690 8.083 5.428 MuHd_100 : 16.320 10.948 5.064 3.512 MuHd_105 : 5.578 3.926 1.828 1.263 Hmax_075 : 5.400 11.667 -0.743 3.010 Hmax_095 : 17.063 16.887 2.930 5.495 Hmax_100 : 7.000 11.900 -0.299 3.560 Hmax_105 : 6.000 9.900 -0.199 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9260 0.0740 DFMC : 0.8625 0.1375
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 619 LmjF.02.0040 MIMKASGAAVLHAVREKMQEATVAALIVTSSDAHNSEYVATHLQSRAFISHFQGSAGTALITMEKALLWTDGRYWLAAEE 80 EKYPEFDLMKQGQPEVPSLEEWIAANLGSKAVVGMSPYVATVAEWERLSKKINLRPVANIVQDMMPPEKSVRKMYVRPAE 160 FCGATCQERRAAILAELEKKDCDMIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDKHYENVRLYVNLDKVTDAVRQAC 240 EDHIDFYPYEQFEADLKQLPRGRKALVDERQTSEAVFRILKDVGTVTVRVVCGPAQKLKAIKNEVELKGFRDCHVRDGAA 320 LTRYLAWLHDQVANKGVTDLNEYDAATKLEEFRAQGEHFVQLSFGSISSIGPNGAMCHYSPAETGSAAIRRDQLYLIDSG 400 AHYWDGTTDVTRTICFTAPSDEQREAYTLVLKGHIALNSIIFPKGTSGVRLDTLARMALWGVGLDYAHGTGHGVGSFLNV 480 HEGPHGISTRPVATGANMELHSIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLT 560 ETERAWVDRYHAKVVASIMPHLQQAGDQNAVEYLKYHTRPLFAVNEAYTLLSPDGKGAK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.02.0040 4 ---MIMK|AS 0.080 . LmjF.02.0040 15 AVLHAVR|EK 0.073 . LmjF.02.0040 17 LHAVREK|MQ 0.074 . LmjF.02.0040 46 ATHLQSR|AF 0.098 . LmjF.02.0040 65 ALITMEK|AL 0.057 . LmjF.02.0040 73 LLWTDGR|YW 0.105 . LmjF.02.0040 82 LAAEEEK|YP 0.065 . LmjF.02.0040 90 PEFDLMK|QG 0.065 . LmjF.02.0040 110 AANLGSK|AV 0.069 . LmjF.02.0040 127 TVAEWER|LS 0.080 . LmjF.02.0040 130 EWERLSK|KI 0.090 . LmjF.02.0040 131 WERLSKK|IN 0.084 . LmjF.02.0040 135 SKKINLR|PV 0.132 . LmjF.02.0040 149 DMMPPEK|SV 0.101 . LmjF.02.0040 152 PPEKSVR|KM 0.080 . LmjF.02.0040 153 PEKSVRK|MY 0.071 . LmjF.02.0040 157 VRKMYVR|PA 0.132 . LmjF.02.0040 169 GATCQER|RA 0.076 . LmjF.02.0040 170 ATCQERR|AA 0.156 . LmjF.02.0040 179 ILAELEK|KD 0.061 . LmjF.02.0040 180 LAELEKK|DC 0.134 . LmjF.02.0040 200 AWFTNLR|GG 0.076 . LmjF.02.0040 218 AYAVIDK|HY 0.069 . LmjF.02.0040 224 KHYENVR|LY 0.070 . LmjF.02.0040 231 LYVNLDK|VT 0.066 . LmjF.02.0040 237 KVTDAVR|QA 0.079 . LmjF.02.0040 257 QFEADLK|QL 0.062 . LmjF.02.0040 261 DLKQLPR|GR 0.083 . LmjF.02.0040 263 KQLPRGR|KA 0.097 . LmjF.02.0040 264 QLPRGRK|AL 0.227 . LmjF.02.0040 270 KALVDER|QT 0.091 . LmjF.02.0040 278 TSEAVFR|IL 0.147 . LmjF.02.0040 281 AVFRILK|DV 0.271 . LmjF.02.0040 289 VGTVTVR|VV 0.079 . LmjF.02.0040 297 VCGPAQK|LK 0.057 . LmjF.02.0040 299 GPAQKLK|AI 0.080 . LmjF.02.0040 302 QKLKAIK|NE 0.054 . LmjF.02.0040 308 KNEVELK|GF 0.068 . LmjF.02.0040 311 VELKGFR|DC 0.079 . LmjF.02.0040 316 FRDCHVR|DG 0.101 . LmjF.02.0040 323 DGAALTR|YL 0.096 . LmjF.02.0040 335 HDQVANK|GV 0.094 . LmjF.02.0040 348 EYDAATK|LE 0.053 . LmjF.02.0040 353 TKLEEFR|AQ 0.118 . LmjF.02.0040 390 TGSAAIR|RD 0.091 . LmjF.02.0040 391 GSAAIRR|DQ 0.192 . LmjF.02.0040 412 GTTDVTR|TI 0.083 . LmjF.02.0040 424 APSDEQR|EA 0.131 . LmjF.02.0040 432 AYTLVLK|GH 0.056 . LmjF.02.0040 444 NSIIFPK|GT 0.094 . LmjF.02.0040 450 KGTSGVR|LD 0.068 . LmjF.02.0040 456 RLDTLAR|MA 0.095 . LmjF.02.0040 490 PHGISTR|PV 0.176 . LmjF.02.0040 512 NEPGYYK|DG 0.070 . LmjF.02.0040 519 DGHYGIR|IE 0.082 . LmjF.02.0040 530 EEVVECR|TK 0.080 . LmjF.02.0040 532 VVECRTK|YS 0.072 . LmjF.02.0040 551 TMAPLCR|DL 0.130 . LmjF.02.0040 564 LLTETER|AW 0.080 . LmjF.02.0040 569 ERAWVDR|YH 0.165 . LmjF.02.0040 573 VDRYHAK|VV 0.103 . LmjF.02.0040 595 NAVEYLK|YH 0.059 . LmjF.02.0040 599 YLKYHTR|PL 0.110 . LmjF.02.0040 616 LLSPDGK|GA 0.085 . LmjF.02.0040 619 PDGKGAK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >LmjF.02.0040 ATGATAATGAAGGCTTCTGGCGCCGCCGTGCTGCACGCGGTGCGTGAGAAGATGCAAGAG GCCACCGTGGCTGCACTCATCGTCACCAGCAGCGACGCGCACAACAGCGAGTACGTGGCG ACGCACCTGCAGAGTCGCGCATTCATCTCTCACTTCCAAGGCAGCGCCGGTACCGCCCTC ATCACGATGGAGAAGGCACTTCTGTGGACGGACGGACGCTACTGGTTGGCCGCAGAGGAG GAGAAGTACCCCGAGTTTGATCTCATGAAGCAAGGCCAGCCAGAGGTCCCGTCGCTCGAG GAGTGGATTGCCGCCAATCTCGGCTCCAAAGCAGTTGTTGGCATGAGCCCGTACGTCGCC ACGGTGGCGGAGTGGGAACGGCTGAGCAAGAAGATCAATCTGCGCCCGGTGGCAAACATC GTTCAGGACATGATGCCGCCGGAGAAGAGCGTGCGAAAAATGTACGTGCGTCCCGCCGAG TTCTGCGGTGCCACCTGCCAGGAGCGGCGCGCCGCGATTCTCGCAGAGCTGGAGAAGAAG GACTGCGACATGATCATTCTCTCCGCACTGGATGAGATCGCATGGTTCACGAATCTGCGC GGCGGCGACGTGGACTACAACCCCGTCTTCTACGCGTACGCTGTCATTGACAAGCACTAC GAAAACGTGCGCCTCTACGTGAATCTGGACAAGGTCACAGACGCAGTGCGCCAGGCGTGC GAGGATCACATCGACTTCTACCCGTACGAGCAGTTCGAGGCGGATCTCAAGCAGCTACCA CGGGGTCGCAAGGCCCTCGTCGACGAGCGCCAGACGAGCGAGGCCGTCTTTCGCATCTTG AAGGATGTCGGCACCGTGACGGTGCGCGTCGTTTGCGGTCCGGCGCAGAAGTTGAAGGCG ATCAAGAATGAGGTCGAGCTCAAGGGCTTCCGCGACTGCCACGTACGCGACGGTGCCGCG CTGACGCGCTACCTTGCCTGGCTGCACGACCAGGTCGCGAACAAGGGTGTGACGGACCTG AACGAGTACGACGCGGCCACGAAGCTCGAGGAGTTCCGCGCGCAGGGGGAACACTTCGTG CAGCTCAGTTTTGGTTCCATCTCGTCCATCGGCCCTAACGGGGCGATGTGCCACTACAGC CCCGCCGAGACGGGCTCTGCTGCCATTCGCAGAGACCAGCTGTACTTAATCGACAGCGGC GCGCACTACTGGGACGGTACCACCGATGTGACGCGCACCATCTGCTTCACAGCGCCGAGT GATGAGCAGCGCGAGGCCTACACGCTTGTCCTCAAAGGGCATATTGCACTCAACAGCATT ATTTTTCCCAAGGGCACAAGCGGTGTCCGTCTCGACACCCTGGCGCGTATGGCGCTCTGG GGTGTGGGGCTGGACTACGCCCACGGCACTGGGCATGGCGTGGGATCCTTTCTCAACGTG CACGAGGGCCCCCACGGAATCAGCACTCGTCCAGTTGCCACGGGGGCGAACATGGAGCTG CACTCCATTGTGTCGAACGAGCCTGGCTACTACAAGGACGGGCACTACGGCATCCGCATT GAGAACCTCGAGGAGGTGGTTGAGTGTCGGACTAAGTACAGCGCGACCGGCTTCTACACC ATGTCCCACCTCACGATGGCGCCTCTGTGCCGCGACCTCATCGACGTAAGCCTCCTCACA GAAACGGAGCGCGCCTGGGTAGACCGATACCACGCCAAGGTGGTGGCGAGCATCATGCCG CACCTACAACAGGCGGGCGACCAGAACGCCGTCGAGTACCTCAAATACCACACGCGACCT CTCTTTGCGGTGAATGAGGCGTACACCCTGCTCAGTCCAGACGGGAAAGGGGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MIMKASGAAVLHAVREKMQEATVAALIVTSSDAHNSEYVATHLQSRAFISHFQGSAGTAL ITMEKALLWTDGRYWLAAEEEKYPEFDLMKQGQPEVPSLEEWIAANLGSKAVVGMSPYVA TVAEWERLSKKINLRPVANIVQDMMPPEKSVRKMYVRPAEFCGATCQERRAAILAELEKK DCDMIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDKHYENVRLYVNLDKVTDAVRQAC EDHIDFYPYEQFEADLKQLPRGRKALVDERQTSEAVFRILKDVGTVTVRVVCGPAQKLKA IKNEVELKGFRDCHVRDGAALTRYLAWLHDQVANKGVTDLNEYDAATKLEEFRAQGEHFV QLSFGSISSIGPNGAMCHYSPAETGSAAIRRDQLYLIDSGAHYWDGTTDVTRTICFTAPS DEQREAYTLVLKGHIALNSIIFPKGTSGVRLDTLARMALWGVGLDYAHGTGHGVGSFLNV HEGPHGISTRPVATGANMELHSIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYT MSHLTMAPLCRDLIDVSLLTETERAWVDRYHAKVVASIMPHLQQAGDQNAVEYLKYHTRP LFAVNEAYTLLSPDGKGAK

  • title: active site
  • coordinates: H378,D398,D409,S476,E507,E521
No Results
No Results
No Results

LmjF.02.0040      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India