LmjF.09.1310 | PPPDE putative peptidase domain containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
LmjF.09.1310OTHER0.9999820.0000170.000001
No Results

  • Fasta :-

    >LmjF.09.1310 MDSASGDGGDGAPASAERHSLKPLRWIEEVRDASQPNAVFLNVYDVRGSSTLLYSVGWGV HHVGVQVYGKEYQYGHRPIGKGIGSVKPHQSPPHTYREQFFLGQTQLSASEVEKLVVAFS DKVEWLGSNYHLVKHNCIDFARAFCEALLPPAVRVEQARRAEEAGLSQKMHMVEVEVDGM RHSVPVLIPHHVDRLARYAAHYLPKSSMQRFDRLESSFFSMSEVPQERGQPTAADPDTNR STTPTPQPHTRTSH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/571 Sequence name : 571 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 2.904 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.141 0.004 0.508 MesoH : -0.866 0.044 -0.550 0.111 MuHd_075 : 19.044 7.366 4.673 2.376 MuHd_095 : 38.868 17.238 8.864 6.075 MuHd_100 : 32.411 14.097 7.415 4.653 MuHd_105 : 19.518 7.402 4.816 2.237 Hmax_075 : -2.333 -2.100 -2.155 0.560 Hmax_095 : 10.800 5.700 1.138 3.280 Hmax_100 : 10.400 5.300 0.859 2.620 Hmax_105 : -1.000 -1.750 -1.687 1.657 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9320 0.0680 DFMC : 0.8956 0.1044
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 LmjF.09.1310 MDSASGDGGDGAPASAERHSLKPLRWIEEVRDASQPNAVFLNVYDVRGSSTLLYSVGWGVHHVGVQVYGKEYQYGHRPIG 80 KGIGSVKPHQSPPHTYREQFFLGQTQLSASEVEKLVVAFSDKVEWLGSNYHLVKHNCIDFARAFCEALLPPAVRVEQARR 160 AEEAGLSQKMHMVEVEVDGMRHSVPVLIPHHVDRLARYAAHYLPKSSMQRFDRLESSFFSMSEVPQERGQPTAADPDTNR 240 STTPTPQPHTRTSH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.09.1310 18 APASAER|HS 0.093 . LmjF.09.1310 22 AERHSLK|PL 0.086 . LmjF.09.1310 25 HSLKPLR|WI 0.153 . LmjF.09.1310 31 RWIEEVR|DA 0.146 . LmjF.09.1310 47 LNVYDVR|GS 0.111 . LmjF.09.1310 70 GVQVYGK|EY 0.065 . LmjF.09.1310 77 EYQYGHR|PI 0.133 . LmjF.09.1310 81 GHRPIGK|GI 0.104 . LmjF.09.1310 87 KGIGSVK|PH 0.063 . LmjF.09.1310 97 SPPHTYR|EQ 0.108 . LmjF.09.1310 114 SASEVEK|LV 0.077 . LmjF.09.1310 122 VVAFSDK|VE 0.057 . LmjF.09.1310 134 SNYHLVK|HN 0.067 . LmjF.09.1310 142 NCIDFAR|AF 0.110 . LmjF.09.1310 154 LLPPAVR|VE 0.071 . LmjF.09.1310 159 VRVEQAR|RA 0.165 . LmjF.09.1310 160 RVEQARR|AE 0.180 . LmjF.09.1310 169 EAGLSQK|MH 0.061 . LmjF.09.1310 181 VEVDGMR|HS 0.080 . LmjF.09.1310 194 IPHHVDR|LA 0.158 . LmjF.09.1310 197 HVDRLAR|YA 0.400 . LmjF.09.1310 205 AAHYLPK|SS 0.102 . LmjF.09.1310 210 PKSSMQR|FD 0.091 . LmjF.09.1310 213 SMQRFDR|LE 0.259 . LmjF.09.1310 228 SEVPQER|GQ 0.081 . LmjF.09.1310 240 ADPDTNR|ST 0.113 . LmjF.09.1310 251 TPQPHTR|TS 0.141 . ____________________________^_________________

  • Fasta :-

    >LmjF.09.1310 ATGGACAGCGCTAGCGGAGATGGCGGGGATGGCGCTCCTGCGTCGGCGGAGCGCCATTCT CTGAAGCCGCTTAGGTGGATAGAGGAGGTGAGAGACGCGAGCCAGCCGAACGCCGTCTTT CTCAATGTGTACGACGTGAGGGGCAGTAGCACGCTCCTGTACTCCGTTGGGTGGGGCGTA CATCATGTCGGCGTGCAGGTGTACGGCAAAGAGTATCAGTATGGTCATCGCCCCATCGGC AAAGGCATCGGCAGTGTCAAGCCTCACCAATCGCCTCCGCACACGTACCGGGAGCAGTTC TTCCTTGGTCAGACGCAGCTGAGCGCGTCCGAGGTGGAGAAGCTGGTGGTGGCCTTCTCG GACAAGGTGGAGTGGCTGGGCAGCAACTACCACCTCGTGAAGCACAACTGCATCGACTTT GCTCGAGCATTTTGCGAGGCGCTCCTGCCGCCCGCAGTACGCGTGGAGCAGGCGCGGCGG GCGGAGGAGGCAGGCCTGTCGCAGAAGATGCACATGGTGGAGGTCGAGGTGGACGGAATG CGGCACTCGGTGCCGGTGCTCATACCGCACCACGTCGATCGGCTAGCGCGGTACGCAGCG CACTACCTGCCGAAATCTTCCATGCAGAGATTCGACCGACTCGAAAGCTCGTTCTTCAGC ATGTCCGAGGTGCCCCAGGAGCGGGGGCAGCCTACCGCCGCGGATCCCGACACAAATCGC AGCACAACCCCGACACCGCAGCCGCACACCCGCACGAGTCATTAG
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  • Fasta :-

    MDSASGDGGDGAPASAERHSLKPLRWIEEVRDASQPNAVFLNVYDVRGSSTLLYSVGWGV HHVGVQVYGKEYQYGHRPIGKGIGSVKPHQSPPHTYREQFFLGQTQLSASEVEKLVVAFS DKVEWLGSNYHLVKHNCIDFARAFCEALLPPAVRVEQARRAEEAGLSQKMHMVEVEVDGM RHSVPVLIPHHVDRLARYAAHYLPKSSMQRFDRLESSFFSMSEVPQERGQPTAADPDTNR STTPTPQPHTRTSH

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IDSitePeptideScoreMethod
LmjF.09.131020 SAERHSLKPL0.997unsp

LmjF.09.1310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India