LmjF.13.0090 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LmjF.13.0090OTHER0.9442150.0069160.048870
No Results

  • Fasta :-

    >LmjF.13.0090 MQAYTQLEKLCHKVHRLTHLLSLGAWDAKTMMPSKGAAARGAALGELHGLITEMITSPST KALLDEAETAKAELTTVQQANLRELRRIYASQAALPTELRVLKTKLSATTPLIWAKCRSN NDFATFLPALKEMIALARREAQYRSAATGKPLYEALFNQYESGMTLETLEKILLDVKSWL PELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFTGM VKEDSRITTAYDLQDFAKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLTPLLKEYFGDQPAFSLENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWSMGAFGYFPT YSLGSMFAAQLMVTIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYDTEDLILKA TGEALNPKHFREYLERRYLRQEG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/440 Sequence name : 440 Sequence length : 503 VALUES OF COMPUTED PARAMETERS Coef20 : 3.700 CoefTot : -0.884 ChDiff : -12 ZoneTo : 45 KR : 6 DE : 2 CleavSite : 42 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.441 0.105 0.592 MesoH : -0.752 0.221 -0.476 0.171 MuHd_075 : 23.641 13.445 6.159 5.487 MuHd_095 : 36.452 24.268 11.089 7.772 MuHd_100 : 43.232 32.264 14.846 9.773 MuHd_105 : 43.641 36.619 16.452 10.259 Hmax_075 : 14.000 9.300 1.466 3.860 Hmax_095 : 6.125 8.488 4.194 2.940 Hmax_100 : 15.800 19.200 4.580 5.260 Hmax_105 : 13.900 27.067 4.277 6.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8132 0.1868 DFMC : 0.6148 0.3852
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 503 LmjF.13.0090 MQAYTQLEKLCHKVHRLTHLLSLGAWDAKTMMPSKGAAARGAALGELHGLITEMITSPSTKALLDEAETAKAELTTVQQA 80 NLRELRRIYASQAALPTELRVLKTKLSATTPLIWAKCRSNNDFATFLPALKEMIALARREAQYRSAATGKPLYEALFNQY 160 ESGMTLETLEKILLDVKSWLPELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFTGM 240 VKEDSRITTAYDLQDFAKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSRFAEVVIGHSSAFLEFLTPLL 320 KEYFGDQPAFSLENVRLMNQTVKPGFIRIRADEVCYPLHILLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRD 400 EIGCLQDIHWSMGAFGYFPTYSLGSMFAAQLMVTIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYDTEDLILKA 480 TGEALNPKHFREYLERRYLRQEG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.13.0090 9 AYTQLEK|LC 0.057 . LmjF.13.0090 13 LEKLCHK|VH 0.052 . LmjF.13.0090 16 LCHKVHR|LT 0.102 . LmjF.13.0090 29 LGAWDAK|TM 0.070 . LmjF.13.0090 35 KTMMPSK|GA 0.074 . LmjF.13.0090 40 SKGAAAR|GA 0.178 . LmjF.13.0090 61 ITSPSTK|AL 0.083 . LmjF.13.0090 71 DEAETAK|AE 0.062 . LmjF.13.0090 83 VQQANLR|EL 0.085 . LmjF.13.0090 86 ANLRELR|RI 0.238 . LmjF.13.0090 87 NLRELRR|IY 0.113 . LmjF.13.0090 100 ALPTELR|VL 0.076 . LmjF.13.0090 103 TELRVLK|TK 0.096 . LmjF.13.0090 105 LRVLKTK|LS 0.067 . LmjF.13.0090 116 TPLIWAK|CR 0.070 . LmjF.13.0090 118 LIWAKCR|SN 0.140 . LmjF.13.0090 131 TFLPALK|EM 0.053 . LmjF.13.0090 138 EMIALAR|RE 0.081 . LmjF.13.0090 139 MIALARR|EA 0.114 . LmjF.13.0090 144 RREAQYR|SA 0.234 . LmjF.13.0090 150 RSAATGK|PL 0.085 . LmjF.13.0090 171 TLETLEK|IL 0.063 . LmjF.13.0090 177 KILLDVK|SW 0.068 . LmjF.13.0090 186 LPELLQK|IL 0.069 . LmjF.13.0090 192 KILAAQR|DA 0.111 . LmjF.13.0090 207 PEAPFPK|DK 0.083 . LmjF.13.0090 209 APFPKDK|QE 0.068 . LmjF.13.0090 215 KQEALSR|HL 0.092 . LmjF.13.0090 229 FDFESGR|LD 0.072 . LmjF.13.0090 242 PFTGMVK|ED 0.061 . LmjF.13.0090 246 MVKEDSR|IT 0.084 . LmjF.13.0090 258 DLQDFAK|GL 0.095 . LmjF.13.0090 271 HETGHSK|YE 0.071 . LmjF.13.0090 282 CGPMEMR|GQ 0.084 . LmjF.13.0090 290 QPVCEAR|SM 0.223 . LmjF.13.0090 300 IHESQSR|FA 0.145 . LmjF.13.0090 321 FLTPLLK|EY 0.057 . LmjF.13.0090 336 FSLENVR|LM 0.069 . LmjF.13.0090 343 LMNQTVK|PG 0.064 . LmjF.13.0090 348 VKPGFIR|IR 0.079 . LmjF.13.0090 350 PGFIRIR|AD 0.095 . LmjF.13.0090 363 PLHILLR|YE 0.076 . LmjF.13.0090 368 LRYEIER|AL 0.113 . LmjF.13.0090 382 EAEDIPR|VW 0.084 . LmjF.13.0090 387 PRVWNEK|MK 0.062 . LmjF.13.0090 389 VWNEKMK|AY 0.078 . LmjF.13.0090 399 GLETEGR|DE 0.108 . LmjF.13.0090 436 QLMVTIK|NE 0.059 . LmjF.13.0090 446 GEDTVDK|CI 0.081 . LmjF.13.0090 449 TVDKCIR|TG 0.076 . LmjF.13.0090 459 MEPIFEK|QR 0.066 . LmjF.13.0090 461 PIFEKQR|EK 0.089 . LmjF.13.0090 463 FEKQREK|IW 0.068 . LmjF.13.0090 479 TEDLILK|AT 0.070 . LmjF.13.0090 488 GEALNPK|HF 0.069 . LmjF.13.0090 491 LNPKHFR|EY 0.084 . LmjF.13.0090 496 FREYLER|RY 0.092 . LmjF.13.0090 497 REYLERR|YL 0.198 . LmjF.13.0090 500 LERRYLR|QE 0.297 . ____________________________^_________________

  • Fasta :-

    >LmjF.13.0090 ATGCAGGCCTACACACAACTGGAGAAGCTCTGCCACAAGGTGCACAGATTGACGCACCTT CTGTCTCTCGGCGCTTGGGATGCCAAGACTATGATGCCCTCAAAGGGCGCTGCTGCTCGG GGTGCCGCCCTCGGTGAGCTCCACGGACTCATCACTGAGATGATCACCAGCCCGAGCACG AAGGCGCTGCTGGACGAAGCGGAGACGGCCAAGGCCGAGCTCACTACTGTCCAGCAGGCG AACTTGCGCGAGCTCCGTCGCATTTACGCCTCTCAAGCAGCGCTGCCGACCGAGCTCCGC GTGCTCAAGACAAAGCTGTCGGCAACCACTCCGCTTATCTGGGCTAAGTGCCGCAGCAAC AACGACTTTGCGACTTTCCTGCCGGCGCTGAAGGAGATGATTGCGCTTGCGCGCAGGGAG GCGCAGTATCGCTCCGCTGCGACGGGCAAGCCTCTATACGAGGCCCTGTTCAATCAGTAC GAGAGTGGCATGACGTTGGAGACGCTGGAGAAAATCTTGCTCGATGTGAAGTCGTGGCTG CCGGAGCTGCTGCAGAAGATCCTGGCTGCACAGAGGGACGCGGGGCTGGAGGTGGTTGCG CCTGAGGCGCCCTTTCCCAAGGACAAGCAGGAGGCTCTTAGCCGCCATCTCATGGAGGTG TGGGGCTTCGACTTCGAGTCAGGTCGGCTGGACGTCTCCGAGCACCCGTTTACGGGCATG GTAAAGGAAGACTCGCGCATCACTACCGCCTACGACCTGCAGGACTTCGCCAAGGGGCTC TTCGCGACGATCCACGAGACGGGCCACTCCAAGTACGAGACGAACTGCGGCCCGATGGAG ATGCGCGGCCAGCCGGTGTGCGAGGCACGCTCGATGACGATCCACGAGAGCCAGTCGCGC TTTGCCGAGGTTGTGATTGGTCACTCCAGCGCCTTCTTGGAGTTCCTGACTCCACTGCTT AAGGAATACTTCGGTGATCAGCCCGCGTTCTCTCTGGAGAACGTGCGGCTGATGAACCAA ACGGTGAAGCCTGGCTTCATCCGGATTCGGGCGGATGAGGTGTGCTACCCGCTGCACATC TTGCTGCGCTACGAAATAGAGCGTGCACTCATCGAGGGCACGATGGAGGCAGAAGACATC CCTCGCGTGTGGAACGAGAAGATGAAGGCATACCTGGGCCTGGAGACGGAGGGCCGCGAC GAGATTGGCTGCCTGCAGGACATTCACTGGTCGATGGGCGCCTTTGGCTACTTCCCGACG TACTCGCTGGGCTCCATGTTCGCGGCGCAGCTGATGGTGACGATCAAGAATGAGCTCGGT GAGGACACAGTGGACAAGTGCATCCGCACTGGTCAGATGGAGCCGATCTTTGAGAAGCAG AGGGAGAAGATCTGGAGCCAGGGATGTCTCTACGACACGGAAGACCTGATTCTCAAGGCG ACCGGCGAAGCGCTGAACCCCAAGCACTTTCGCGAGTACTTGGAGCGCCGCTACCTGCGC CAGGAGGGCTGA
  • Download Fasta

  • Fasta :-

    MQAYTQLEKLCHKVHRLTHLLSLGAWDAKTMMPSKGAAARGAALGELHGLITEMITSPST KALLDEAETAKAELTTVQQANLRELRRIYASQAALPTELRVLKTKLSATTPLIWAKCRSN NDFATFLPALKEMIALARREAQYRSAATGKPLYEALFNQYESGMTLETLEKILLDVKSWL PELLQKILAAQRDAGLEVVAPEAPFPKDKQEALSRHLMEVWGFDFESGRLDVSEHPFTGM VKEDSRITTAYDLQDFAKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLTPLLKEYFGDQPAFSLENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWSMGAFGYFPT YSLGSMFAAQLMVTIKNELGEDTVDKCIRTGQMEPIFEKQREKIWSQGCLYDTEDLILKA TGEALNPKHFREYLERRYLRQEG

  • title: metal binding site
  • coordinates: H265,H269,E296
No Results
No Results
No Results

LmjF.13.0090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India