LmjF.17.0140 | peptidase T, putative, metallo-peptidase, ClanMH, family M20B

_IDPredictionOTHERSPmTPCS_Position
LmjF.17.0140OTHER0.9783850.0004390.021175
No Results

  • Fasta :-

    >LmjF.17.0140 MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVVC DKYATVTAVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNEEKNIWMR LREHAELSKYVGQDILFSDGTSVLGADDKAAIASVIEMVANLDSSKEKHGDIVICFVPDE EIGLVGAKHLDVKARFNVNFAYTLDCCELGEMMYECFNAASATIKFTGVSVHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDADTTQARLEAMVREHDLAKYTARK AYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSLKGDFTAIDLLLEAMRKASVKPNIIPM RGGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCRNIVLLGAEKSEKTP SLL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/465 Sequence name : 465 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 4.421 CoefTot : 0.122 ChDiff : -7 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.329 0.015 0.535 MesoH : -0.226 0.561 -0.287 0.273 MuHd_075 : 13.428 11.411 4.782 2.067 MuHd_095 : 27.372 20.240 8.362 7.482 MuHd_100 : 25.719 20.243 7.662 7.995 MuHd_105 : 24.721 18.409 6.176 7.812 Hmax_075 : 0.583 8.050 -1.217 2.287 Hmax_095 : 4.113 7.438 -0.369 3.465 Hmax_100 : 4.100 9.300 -0.303 4.140 Hmax_105 : 2.333 8.633 -1.036 4.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6942 0.3058 DFMC : 0.7774 0.2226
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 LmjF.17.0140 MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVVCDKYATVTAVKPGNVPGAPRI 80 GFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNEEKNIWMRLREHAELSKYVGQDILFSDGTSVLGADDKAAIASVIEMVA 160 NLDSSKEKHGDIVICFVPDEEIGLVGAKHLDVKARFNVNFAYTLDCCELGEMMYECFNAASATIKFTGVSVHPMSAKGVM 240 VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDADTTQARLEAMVREHDLAKYTARKAYMLDVAKKVQAKYPTGKVE 320 IEIEDVYANIANSLKGDFTAIDLLLEAMRKASVKPNIIPMRGGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVK 400 AYEVCRNIVLLGAEKSEKTPSLL 480 ...............P................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.17.0140 9 LAPIEHR|LE 0.072 . LmjF.17.0140 13 EHRLEQR|FR 0.091 . LmjF.17.0140 15 RLEQRFR|RY 0.141 . LmjF.17.0140 16 LEQRFRR|YS 0.538 *ProP* LmjF.17.0140 27 TTQSDPR|NL 0.135 . LmjF.17.0140 31 DPRNLGK|CI 0.073 . LmjF.17.0140 48 LAELLAK|EL 0.069 . LmjF.17.0140 62 QNVVCDK|YA 0.073 . LmjF.17.0140 70 ATVTAVK|PG 0.053 . LmjF.17.0140 79 NVPGAPR|IG 0.073 . LmjF.17.0140 98 GLCPHVK|AQ 0.063 . LmjF.17.0140 101 PHVKAQK|IR 0.064 . LmjF.17.0140 103 VKAQKIR|YT 0.167 . LmjF.17.0140 115 VCLNEEK|NI 0.060 . LmjF.17.0140 120 EKNIWMR|LR 0.110 . LmjF.17.0140 122 NIWMRLR|EH 0.074 . LmjF.17.0140 129 EHAELSK|YV 0.087 . LmjF.17.0140 149 VLGADDK|AA 0.073 . LmjF.17.0140 166 ANLDSSK|EK 0.060 . LmjF.17.0140 168 LDSSKEK|HG 0.096 . LmjF.17.0140 188 IGLVGAK|HL 0.066 . LmjF.17.0140 193 AKHLDVK|AR 0.067 . LmjF.17.0140 195 HLDVKAR|FN 0.127 . LmjF.17.0140 225 AASATIK|FT 0.112 . LmjF.17.0140 237 VHPMSAK|GV 0.090 . LmjF.17.0140 256 FISQFNR|EE 0.099 . LmjF.17.0140 266 PECTELR|EG 0.079 . LmjF.17.0140 274 GYWWFAK|MD 0.064 . LmjF.17.0140 283 ADTTQAR|LE 0.081 . LmjF.17.0140 289 RLEAMVR|EH 0.077 . LmjF.17.0140 295 REHDLAK|YT 0.079 . LmjF.17.0140 299 LAKYTAR|KA 0.114 . LmjF.17.0140 300 AKYTARK|AY 0.071 . LmjF.17.0140 308 YMLDVAK|KV 0.081 . LmjF.17.0140 309 MLDVAKK|VQ 0.098 . LmjF.17.0140 313 AKKVQAK|YP 0.082 . LmjF.17.0140 318 AKYPTGK|VE 0.071 . LmjF.17.0140 335 NIANSLK|GD 0.070 . LmjF.17.0140 349 LLLEAMR|KA 0.101 . LmjF.17.0140 350 LLEAMRK|AS 0.066 . LmjF.17.0140 354 MRKASVK|PN 0.076 . LmjF.17.0140 361 PNIIPMR|GG 0.111 . LmjF.17.0140 372 GAALSVK|GL 0.066 . LmjF.17.0140 400 PIPSFVK|AY 0.064 . LmjF.17.0140 406 KAYEVCR|NI 0.079 . LmjF.17.0140 415 VLLGAEK|SE 0.056 . LmjF.17.0140 418 GAEKSEK|TP 0.061 . ____________________________^_________________

  • Fasta :-

    >LmjF.17.0140 ATGTCTCTCGCGCCGATCGAACACCGCCTGGAGCAGCGATTCCGCCGCTACTCCGCTATC ACCACCCAGAGCGACCCCCGCAACCTCGGCAAATGCATCCCATCCACCCCCGGGCAGCAG GTGCTGGCGGAGCTGCTCGCCAAGGAGCTTCAGGCGATGGAACTGCAGAACGTCGTCTGC GACAAGTATGCGACGGTGACGGCGGTGAAGCCGGGCAATGTGCCTGGCGCTCCGCGCATC GGATTCATCTGCCACCTCGACACTTTCGACTGCGGTCTCTGCCCGCATGTGAAGGCTCAG AAGATTCGCTACACAGGCGGTGATGTCTGCCTAAACGAGGAGAAGAACATTTGGATGAGG CTGAGGGAGCACGCAGAGCTGAGCAAGTACGTTGGACAGGACATTCTTTTTAGCGACGGC ACCAGCGTGCTCGGCGCGGATGACAAGGCCGCTATTGCGTCGGTGATAGAGATGGTTGCC AACCTCGACTCCAGTAAGGAGAAGCACGGCGACATCGTCATTTGCTTTGTGCCAGATGAG GAGATCGGCTTGGTAGGCGCGAAGCACCTCGACGTAAAGGCGCGCTTCAACGTCAACTTT GCCTATACGCTCGACTGCTGCGAGCTGGGAGAGATGATGTACGAGTGCTTCAACGCCGCG AGTGCCACGATTAAGTTTACAGGTGTCTCGGTGCACCCGATGTCGGCCAAGGGCGTGATG GTGAATCCGCTGCTGATGGCCGTGGACTTCATTTCCCAGTTCAACCGCGAGGAGACGCCC GAGTGCACGGAGCTGCGCGAGGGGTACTGGTGGTTCGCGAAGATGGATGCCGACACCACC CAGGCGAGGCTCGAGGCAATGGTGCGCGAGCACGACCTCGCCAAATACACGGCCCGCAAA GCGTACATGCTCGATGTGGCCAAGAAGGTGCAGGCCAAGTACCCGACCGGCAAGGTGGAG ATTGAGATTGAGGACGTGTATGCTAACATCGCGAACTCGCTTAAGGGTGACTTCACCGCG ATTGATCTGCTGCTGGAGGCGATGAGGAAGGCGAGCGTGAAGCCGAACATTATCCCAATG CGTGGGGGCACGGACGGCGCAGCGCTCTCCGTGAAGGGCCTCCTCACCCCCAACTTTTTC ACTGGCGCGCACAACTTCCACTCCTGCTTCGAGTTCCTTCCCATCCCGTCCTTCGTGAAG GCGTATGAGGTGTGCCGCAACATCGTCCTGCTCGGCGCTGAAAAGAGCGAGAAGACGCCG TCCTTGCTGTAG
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  • Fasta :-

    MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVVC DKYATVTAVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNEEKNIWMR LREHAELSKYVGQDILFSDGTSVLGADDKAAIASVIEMVANLDSSKEKHGDIVICFVPDE EIGLVGAKHLDVKARFNVNFAYTLDCCELGEMMYECFNAASATIKFTGVSVHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDADTTQARLEAMVREHDLAKYTARK AYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSLKGDFTAIDLLLEAMRKASVKPNIIPM RGGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCRNIVLLGAEKSEKTP SLL

  • title: metal binding site
  • coordinates: H85,D147,E180,E181,D205,H387
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.17.0140352 SMRKASVKPN0.995unspLmjF.17.0140352 SMRKASVKPN0.995unspLmjF.17.0140352 SMRKASVKPN0.995unspLmjF.17.014018 SFRRYSAITT0.99unspLmjF.17.0140259 TNREETPECT0.991unsp

LmjF.17.0140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India