LmjF.19.0160 | metallo-peptidase, Clan MG, Family M24

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.19.0160OTHER0.9997590.0000510.000190
No Results

  • Fasta :-

    >LmjF.19.0160 MSKNADQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAK VCDLCRLGDDTITAKVKTMFKGTEKGIAFPTCISVNNCVCHNSPGVSDETTQQEIAMGDV VHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITAAYNILNTALRQMRPGTTIYQ VTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKK ARLGLNEMAKHGAVIPYPILFEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYT DEMLLATNKLSLSLEKKAAK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/65 Sequence name : 65 Sequence length : 380 VALUES OF COMPUTED PARAMETERS Coef20 : 2.146 CoefTot : 0.006 ChDiff : -9 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.465 0.988 0.050 0.458 MesoH : -0.628 0.146 -0.367 0.180 MuHd_075 : 27.790 13.079 7.249 4.876 MuHd_095 : 18.762 6.992 4.471 3.277 MuHd_100 : 6.165 2.445 0.456 0.382 MuHd_105 : 11.843 8.861 2.561 1.991 Hmax_075 : -6.883 -2.683 -4.279 1.738 Hmax_095 : -16.450 -8.487 -6.725 0.079 Hmax_100 : -20.400 -8.900 -7.289 -1.040 Hmax_105 : -18.300 -8.300 -7.669 -0.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9466 0.0534 DFMC : 0.9620 0.0380
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 380 LmjF.19.0160 MSKNADQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAKVCDLCRLGDDTITAKVKTMF 80 KGTEKGIAFPTCISVNNCVCHNSPGVSDETTQQEIAMGDVVHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITA 160 AYNILNTALRQMRPGTTIYQVTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD 240 IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKKARLGLNEMAKHGAVIPYPIL 320 FEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYTDEMLLATNKLSLSLEKKAAK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.19.0160 3 ----MSK|NA 0.085 . LmjF.19.0160 36 NSDVVVR|YK 0.106 . LmjF.19.0160 38 DVVVRYK|KA 0.065 . LmjF.19.0160 39 VVVRYKK|AA 0.315 . LmjF.19.0160 49 WCNETLR|VL 0.092 . LmjF.19.0160 56 VLIDATK|PG 0.058 . LmjF.19.0160 60 ATKPGAK|VC 0.057 . LmjF.19.0160 66 KVCDLCR|LG 0.079 . LmjF.19.0160 75 DDTITAK|VK 0.059 . LmjF.19.0160 77 TITAKVK|TM 0.069 . LmjF.19.0160 81 KVKTMFK|GT 0.078 . LmjF.19.0160 85 MFKGTEK|GI 0.059 . LmjF.19.0160 150 EDNELGK|DE 0.077 . LmjF.19.0160 153 ELGKDEK|AA 0.070 . LmjF.19.0160 156 KDEKAAR|VI 0.112 . LmjF.19.0160 170 ILNTALR|QM 0.102 . LmjF.19.0160 173 TALRQMR|PG 0.224 . LmjF.19.0160 187 VTDVVEK|AA 0.072 . LmjF.19.0160 193 KAAEHYK|VT 0.065 . LmjF.19.0160 206 VLSHMMK|RY 0.066 . LmjF.19.0160 207 LSHMMKR|YI 0.420 . LmjF.19.0160 214 YIIDGYR|CI 0.082 . LmjF.19.0160 219 YRCIPQR|RV 0.125 . LmjF.19.0160 220 RCIPQRR|VA 0.206 . LmjF.19.0160 233 HDYDLEK|AQ 0.060 . LmjF.19.0160 247 IVMTSGK|GK 0.067 . LmjF.19.0160 249 MTSGKGK|LK 0.072 . LmjF.19.0160 251 SGKGKLK|ER 0.064 . LmjF.19.0160 253 KGKLKER|DA 0.143 . LmjF.19.0160 256 LKERDAR|PC 0.192 . LmjF.19.0160 261 ARPCVFK|VA 0.076 . LmjF.19.0160 271 DSNYSVK|ME 0.096 . LmjF.19.0160 276 VKMESAK|EV 0.110 . LmjF.19.0160 280 SAKEVQK|EI 0.075 . LmjF.19.0160 285 QKEIDSK|YA 0.068 . LmjF.19.0160 294 TFPFAIR|NL 0.086 . LmjF.19.0160 299 IRNLEAK|KA 0.098 . LmjF.19.0160 300 RNLEAKK|AR 0.077 . LmjF.19.0160 302 LEAKKAR|LG 0.094 . LmjF.19.0160 310 GLNEMAK|HG 0.068 . LmjF.19.0160 323 YPILFEK|EG 0.068 . LmjF.19.0160 332 EVVAHFK|IT 0.060 . LmjF.19.0160 340 TVLISNK|KI 0.067 . LmjF.19.0160 341 VLISNKK|IE 0.069 . LmjF.19.0160 349 EPITGLK|PQ 0.051 . LmjF.19.0160 352 TGLKPQK|AP 0.061 . LmjF.19.0160 369 MLLATNK|LS 0.055 . LmjF.19.0160 376 LSLSLEK|KA 0.065 . LmjF.19.0160 377 SLSLEKK|AA 0.151 . LmjF.19.0160 380 LEKKAAK|-- 0.070 . ____________________________^_________________

  • Fasta :-

    >LmjF.19.0160 ATGTCAAAGAACGCTGACCAGGAGGAGTGGGAGGATTACGGCGACGAGGAGGTGCAGGAT GAAGAAGAGGAGGACACCACCATCAACAACTCCGACGTGGTGGTGCGCTACAAGAAGGCC GCAACGTGGTGCAATGAAACGTTGCGCGTGCTTATCGATGCCACAAAACCTGGCGCCAAG GTGTGCGACCTGTGCCGCCTCGGTGATGACACCATCACCGCCAAGGTCAAGACAATGTTC AAAGGCACGGAAAAAGGCATCGCTTTCCCGACCTGCATCTCGGTCAACAACTGCGTATGC CACAACAGCCCTGGCGTGTCGGACGAGACGACGCAGCAAGAGATCGCGATGGGTGACGTC GTGCACTACGACCTGGGCATCCACGTGGACGGCTACTGCGCCGTCGTCGCGCACACCATT CAGGTGACAGAGGACAATGAGCTTGGCAAGGACGAGAAGGCGGCGCGCGTCATTACAGCG GCGTACAACATCCTGAACACGGCGCTGCGCCAGATGCGTCCCGGTACGACCATCTACCAG GTGACAGACGTAGTTGAGAAGGCTGCGGAGCACTACAAGGTGACTCCGGTAGACGGCGTC CTCTCGCATATGATGAAGCGCTACATCATAGACGGATACCGCTGTATCCCGCAGCGCAGG GTCGCGGAGCACATGGTGCACGACTACGATCTCGAGAAAGCGCAGGTGTGGACGCTAGAC ATTGTCATGACCTCCGGCAAGGGCAAGCTGAAGGAGCGCGATGCGCGGCCGTGCGTGTTC AAGGTGGCTCTGGACTCCAACTACTCTGTGAAAATGGAAAGCGCGAAGGAGGTTCAGAAG GAAATCGACTCCAAGTATGCCACCTTCCCCTTTGCCATCCGCAACCTGGAGGCCAAGAAG GCCCGCCTCGGTCTCAACGAGATGGCGAAGCACGGTGCTGTCATCCCGTACCCTATTCTC TTCGAAAAGGAAGGCGAGGTCGTCGCCCATTTCAAGATTACGGTGCTCATCAGCAACAAG AAGATTGAGCCGATTACCGGCCTGAAGCCGCAGAAGGCCCCGGCGCTCGAGCCATACACG GACGAGATGCTGCTTGCGACGAACAAGCTCTCGCTGTCGCTAGAGAAGAAGGCGGCGAAG TAG
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  • Fasta :-

    MSKNADQEEWEDYGDEEVQDEEEEDTTINNSDVVVRYKKAATWCNETLRVLIDATKPGAK VCDLCRLGDDTITAKVKTMFKGTEKGIAFPTCISVNNCVCHNSPGVSDETTQQEIAMGDV VHYDLGIHVDGYCAVVAHTIQVTEDNELGKDEKAARVITAAYNILNTALRQMRPGTTIYQ VTDVVEKAAEHYKVTPVDGVLSHMMKRYIIDGYRCIPQRRVAEHMVHDYDLEKAQVWTLD IVMTSGKGKLKERDARPCVFKVALDSNYSVKMESAKEVQKEIDSKYATFPFAIRNLEAKK ARLGLNEMAKHGAVIPYPILFEKEGEVVAHFKITVLISNKKIEPITGLKPQKAPALEPYT DEMLLATNKLSLSLEKKAAK

  • title: active site
  • coordinates: H101,D124,V135,K247,I315,K332
No Results
No Results
No Results

LmjF.19.0160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India