LmjF.19.1420 | cysteine peptidase A (CPA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.19.1420SP0.0201690.9790200.000811CS pos: 22-23. CYG-SA. Pr: 0.3996
No Results

  • Fasta :-

    >LmjF.19.1420 MARRNPFLFAIVVTILFVVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEG HRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHV HVDDSVLSGAMSVDWREKGAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQM LVSCDDIDDGCNGGLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPCHDKGEFGARIS GYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNKRA KPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVDDSNTSHVPTTTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/163 Sequence name : 163 Sequence length : 354 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : -0.018 ChDiff : -4 ZoneTo : 33 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.294 2.547 0.537 0.866 MesoH : -0.124 0.406 -0.286 0.292 MuHd_075 : 21.776 14.313 4.966 5.621 MuHd_095 : 14.609 14.136 3.498 2.762 MuHd_100 : 12.421 13.826 4.051 3.416 MuHd_105 : 13.420 14.087 4.193 4.445 Hmax_075 : 18.113 18.300 5.071 6.740 Hmax_095 : 14.700 27.800 6.436 5.828 Hmax_100 : 16.200 25.400 4.740 6.220 Hmax_105 : 12.600 22.300 5.194 6.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8064 0.1936 DFMC : 0.8938 0.1062
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 354 LmjF.19.1420 MARRNPFLFAIVVTILFVVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHN 80 PHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHVHVDDSVLSGAMSVDWREKGAVTPVKNQGMCGSCWAFSAIG 160 NIESQWALKNHSLVSLSEQMLVSCDDIDDGCNGGLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPCHDKGEFGARIS 240 GYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNKRAKPPYWIVKNSWGTSWGEKGY 320 IRLAMGSNQCLLKNYPVTATVDDSNTSHVPTTTA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.19.1420 3 ----MAR|RN 0.076 . LmjF.19.1420 4 ---MARR|NP 0.086 . LmjF.19.1420 44 ASAHYGR|FK 0.147 . LmjF.19.1420 46 AHYGRFK|ER 0.064 . LmjF.19.1420 48 YGRFKER|HG 0.098 . LmjF.19.1420 51 FKERHGK|SF 0.264 . LmjF.19.1420 62 DADEGHR|FN 0.075 . LmjF.19.1420 67 HRFNAFK|QN 0.075 . LmjF.19.1420 90 HYDVSGK|FA 0.076 . LmjF.19.1420 101 TPQEFAK|LY 0.064 . LmjF.19.1420 112 PDYYAHR|GK 0.115 . LmjF.19.1420 114 YYAHRGK|DY 0.081 . LmjF.19.1420 117 HRGKDYK|EH 0.071 . LmjF.19.1420 136 AMSVDWR|EK 0.155 . LmjF.19.1420 138 SVDWREK|GA 0.066 . LmjF.19.1420 145 GAVTPVK|NQ 0.077 . LmjF.19.1420 169 ESQWALK|NH 0.059 . LmjF.19.1420 215 GTVPTEK|SY 0.074 . LmjF.19.1420 232 SPPCHDK|GE 0.075 . LmjF.19.1420 238 KGEFGAR|IS 0.089 . LmjF.19.1420 250 SLPHDEK|AI 0.066 . LmjF.19.1420 258 IAAYVEK|KG 0.061 . LmjF.19.1420 259 AAYVEKK|GP 0.104 . LmjF.19.1420 298 LVVGFNK|RA 0.057 . LmjF.19.1420 299 VVGFNKR|AK 0.137 . LmjF.19.1420 301 GFNKRAK|PP 0.075 . LmjF.19.1420 308 PPYWIVK|NS 0.064 . LmjF.19.1420 318 GTSWGEK|GY 0.070 . LmjF.19.1420 322 GEKGYIR|LA 0.099 . LmjF.19.1420 333 SNQCLLK|NY 0.058 . ____________________________^_________________

  • Fasta :-

    >LmjF.19.1420 ATGGCGCGCCGCAACCCCTTTTTGTTTGCGATAGTGGTGACTATCCTGTTCGTGGTGTGC TACGGCTCCGCTCTCGTCGCCCAGACACCTCTCGGTGTCGACAACTTCATTGCCTCAGCA CATTACGGACGCTTTAAGGAGCGCCACGGCAAGTCCTTCGGCGAGGACGCCGATGAGGGT CACCGCTTCAATGCCTTCAAGCAGAACATGCAGACCGCCTACTTCCTCAACACGCACAAC CCGCACGCGCACTACGACGTGTCCGGCAAGTTTGCAGACCTCACCCCCCAGGAGTTCGCC AAGCTGTACCTGAACCCCGACTACTACGCGCACCGCGGTAAGGATTACAAGGAGCACGTG CACGTCGACGACAGCGTCCTCAGTGGTGCGATGTCGGTGGACTGGCGTGAGAAGGGTGCC GTGACGCCGGTGAAGAACCAGGGAATGTGCGGCTCGTGCTGGGCTTTCTCCGCCATTGGC AACATTGAAAGTCAGTGGGCTTTGAAAAACCACTCGCTGGTTTCGCTGTCGGAGCAGATG CTCGTGTCATGCGACGACATCGATGATGGGTGCAACGGTGGGCTGATGGACCAGGCGATG GAATGGATCATCCAACATCACAACGGCACTGTGCCCACGGAGAAAAGCTACCCCTACGCC TCTGCCGGCGGCACGAGCCCGCCGTGCCATGACAAAGGCGAGTTTGGCGCCAGAATCAGT GGTTACATGTCCCTGCCGCATGACGAGAAGGCGATCGCGGCTTATGTGGAGAAGAAAGGC CCCGTCGCTGTCGCCGTCGACGCGACAACCTGGCAGCTGTACTTTGGCGGTGTGGTCACG CTCTGCTTCGGGTTGTCGCTCAACCACGGTGTGCTCGTTGTCGGCTTCAACAAAAGAGCG AAACCGCCGTACTGGATCGTGAAGAACTCGTGGGGCACCTCGTGGGGTGAGAAGGGGTAC ATCCGCCTTGCCATGGGCAGCAACCAGTGCTTGCTGAAGAATTACCCTGTGACGGCCACG GTTGACGACTCCAACACCTCCCACGTGCCGACGACAACGGCCTAG
  • Download Fasta

  • Fasta :-

    MARRNPFLFAIVVTILFVVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEG HRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHV HVDDSVLSGAMSVDWREKGAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQM LVSCDDIDDGCNGGLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPCHDKGEFGARIS GYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVVTLCFGLSLNHGVLVVGFNKRA KPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVDDSNTSHVPTTTA

  • title: active site
  • coordinates: Q147,C153,H289,N309
No Results
No Results
No Results

LmjF.19.1420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India