LmjF.23.0950 | cytosolic leucyl aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
LmjF.23.0950mTP0.3251490.0016990.673152CS pos: 35-36. SRG-VH. Pr: 0.1141
No Results

  • Fasta :-

    >LmjF.23.0950 MLRRVLSRGPLPQSLSVGPTSKLTVNKGKLAKSRGVHVHFLTIAECAAAAGDASAPIPPG FTGKAGEVDFQTLWTTAQDPATAESVLRKSGRKAAGARRAAEKPAELVAGMGAHSTVRDY RLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQRLKSHEMVEKTAIFAVTGAYQ YDRLKSGTLASKDSAQTGRTRARRAESRAKPPAAPQPPMELVVASSNAQAVRAGEVIGHC VNEARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEEAGLHLMYNVGRGSR YEPYLVVLEYIGNPRSSATTAIVGKGVTFDCGGLNIKPYTSMETMHSDMMGAATAFCTLK AIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLTVEVLNTDAEGRLVLADVLTY VQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAMLANSLMAAGTQCGEELWPM PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKP KGYEPAGVTGFGVQLLVDFLRHNKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/326 Sequence name : 326 Sequence length : 565 VALUES OF COMPUTED PARAMETERS Coef20 : 4.161 CoefTot : -0.742 ChDiff : 12 ZoneTo : 44 KR : 8 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.453 1.782 0.288 0.676 MesoH : 0.148 0.687 -0.191 0.315 MuHd_075 : 45.769 27.842 10.285 10.376 MuHd_095 : 25.340 13.551 6.927 6.268 MuHd_100 : 20.635 10.674 6.414 4.445 MuHd_105 : 24.833 14.632 7.858 4.493 Hmax_075 : 16.567 18.550 2.654 6.020 Hmax_095 : 8.300 11.300 -1.329 4.191 Hmax_100 : 8.000 4.400 -1.436 3.850 Hmax_105 : 10.600 8.300 1.827 3.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0431 0.9569 DFMC : 0.0546 0.9454 This protein is probably imported in mitochondria. f(Ser) = 0.1136 f(Arg) = 0.0909 CMi = 0.57604 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 565 LmjF.23.0950 MLRRVLSRGPLPQSLSVGPTSKLTVNKGKLAKSRGVHVHFLTIAECAAAAGDASAPIPPGFTGKAGEVDFQTLWTTAQDP 80 ATAESVLRKSGRKAAGARRAAEKPAELVAGMGAHSTVRDYRLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQR 160 LKSHEMVEKTAIFAVTGAYQYDRLKSGTLASKDSAQTGRTRARRAESRAKPPAAPQPPMELVVASSNAQAVRAGEVIGHC 240 VNEARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEEAGLHLMYNVGRGSRYEPYLVVLEYIGNPRSSATT 320 AIVGKGVTFDCGGLNIKPYTSMETMHSDMMGAATAFCTLKAIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLT 400 VEVLNTDAEGRLVLADVLTYVQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAMLANSLMAAGTQCGEELWPM 480 PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKPKGYEPAGVTGFGVQLLVDFL 560 RHNKP 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.23.0950 3 ----MLR|RV 0.084 . LmjF.23.0950 4 ---MLRR|VL 0.136 . LmjF.23.0950 8 LRRVLSR|GP 0.104 . LmjF.23.0950 22 SVGPTSK|LT 0.062 . LmjF.23.0950 27 SKLTVNK|GK 0.069 . LmjF.23.0950 29 LTVNKGK|LA 0.075 . LmjF.23.0950 32 NKGKLAK|SR 0.104 . LmjF.23.0950 34 GKLAKSR|GV 0.206 . LmjF.23.0950 64 PPGFTGK|AG 0.076 . LmjF.23.0950 88 TAESVLR|KS 0.100 . LmjF.23.0950 89 AESVLRK|SG 0.152 . LmjF.23.0950 92 VLRKSGR|KA 0.152 . LmjF.23.0950 93 LRKSGRK|AA 0.128 . LmjF.23.0950 98 RKAAGAR|RA 0.112 . LmjF.23.0950 99 KAAGARR|AA 0.205 . LmjF.23.0950 103 ARRAAEK|PA 0.094 . LmjF.23.0950 118 GAHSTVR|DY 0.111 . LmjF.23.0950 121 STVRDYR|LA 0.259 . LmjF.23.0950 129 AVTAAVR|KA 0.074 . LmjF.23.0950 130 VTAAVRK|AK 0.082 . LmjF.23.0950 132 AAVRKAK|MC 0.212 . LmjF.23.0950 145 VSLHPPK|QD 0.061 . LmjF.23.0950 160 PYHPPQR|LK 0.099 . LmjF.23.0950 162 HPPQRLK|SH 0.134 . LmjF.23.0950 169 SHEMVEK|TA 0.074 . LmjF.23.0950 183 GAYQYDR|LK 0.104 . LmjF.23.0950 185 YQYDRLK|SG 0.065 . LmjF.23.0950 192 SGTLASK|DS 0.068 . LmjF.23.0950 199 DSAQTGR|TR 0.075 . LmjF.23.0950 201 AQTGRTR|AR 0.078 . LmjF.23.0950 203 TGRTRAR|RA 0.113 . LmjF.23.0950 204 GRTRARR|AE 0.492 . LmjF.23.0950 208 ARRAESR|AK 0.118 . LmjF.23.0950 210 RAESRAK|PP 0.065 . LmjF.23.0950 232 SNAQAVR|AG 0.133 . LmjF.23.0950 245 HCVNEAR|NL 0.119 . LmjF.23.0950 251 RNLGNLR|ED 0.085 . LmjF.23.0950 265 FYAEWAK|KY 0.063 . LmjF.23.0950 266 YAEWAKK|YM 0.122 . LmjF.23.0950 274 MIPEGIK|VR 0.052 . LmjF.23.0950 276 PEGIKVR|KV 0.122 . LmjF.23.0950 277 EGIKVRK|VL 0.103 . LmjF.23.0950 280 KVRKVLR|GQ 0.098 . LmjF.23.0950 297 LMYNVGR|GS 0.099 . LmjF.23.0950 300 NVGRGSR|YE 0.134 . LmjF.23.0950 315 EYIGNPR|SS 0.093 . LmjF.23.0950 325 TTAIVGK|GV 0.086 . LmjF.23.0950 337 CGGLNIK|PY 0.064 . LmjF.23.0950 360 TAFCTLK|AI 0.068 . LmjF.23.0950 364 TLKAIAK|LQ 0.062 . LmjF.23.0950 397 SIITSLK|GL 0.070 . LmjF.23.0950 411 NTDAEGR|LV 0.094 . LmjF.23.0950 423 VLTYVQK|YA 0.063 . LmjF.23.0950 429 KYAPLDK|KP 0.061 . LmjF.23.0950 430 YAPLDKK|PT 0.089 . LmjF.23.0950 433 LDKKPTR|II 0.117 . LmjF.23.0950 451 IVGLGSR|RA 0.079 . LmjF.23.0950 452 VGLGSRR|AG 0.090 . LmjF.23.0950 487 PIGDEHK|DM 0.081 . LmjF.23.0950 491 EHKDMMK|GG 0.066 . LmjF.23.0950 504 INAAPGR|QA 0.152 . LmjF.23.0950 539 VADVGDK|PK 0.063 . LmjF.23.0950 541 DVGDKPK|GY 0.093 . LmjF.23.0950 561 LLVDFLR|HN 0.092 . LmjF.23.0950 564 DFLRHNK|P- 0.096 . ____________________________^_________________

  • Fasta :-

    >LmjF.23.0950 ATGCTTCGTCGCGTGCTGTCTCGTGGCCCACTCCCACAGTCGCTGTCGGTGGGCCCCACG TCGAAGCTGACGGTGAACAAGGGCAAGCTCGCCAAGAGCCGTGGAGTTCATGTGCACTTT CTCACCATCGCCGAGTGTGCAGCGGCGGCCGGTGATGCTAGCGCCCCTATTCCACCAGGC TTTACCGGCAAGGCAGGGGAGGTCGACTTCCAGACCCTCTGGACGACCGCGCAGGATCCG GCCACAGCGGAGAGCGTTCTGAGAAAGAGTGGCCGAAAGGCAGCCGGGGCCAGGCGCGCT GCGGAAAAGCCTGCCGAGCTCGTGGCTGGCATGGGGGCCCACTCCACGGTGCGGGATTAC CGCCTCGCGGTCACGGCCGCCGTGCGCAAAGCCAAGATGTGCAACGCCGCGTGGGTGTCA CTGCACCCGCCGAAGCAAGATGTCTTTACCATGACAGACCCGTACCACCCGCCACAGCGG CTGAAGAGCCACGAGATGGTGGAAAAAACCGCCATCTTCGCGGTGACGGGGGCGTACCAG TACGACCGCCTGAAATCGGGCACCCTCGCCTCCAAGGATTCTGCACAGACGGGCAGAACC CGCGCGAGGCGGGCGGAATCGCGGGCTAAGCCACCCGCTGCTCCACAGCCGCCGATGGAG CTTGTCGTGGCGTCGAGCAATGCGCAGGCGGTGCGCGCGGGTGAGGTGATCGGGCACTGC GTCAACGAAGCGCGGAACCTCGGCAACCTGCGCGAGGACGAAGGTGTGCCGGAGTTCTAT GCGGAGTGGGCGAAGAAATACATGATACCGGAGGGCATCAAGGTGCGCAAGGTGCTGCGC GGACAGCAGCTCGAGGAGGCGGGCTTGCACCTCATGTACAACGTCGGCCGCGGCTCCCGC TATGAGCCGTACTTGGTGGTGCTGGAGTACATCGGCAATCCCCGCTCGAGCGCGACGACG GCCATCGTGGGCAAGGGCGTGACCTTCGACTGCGGCGGCCTGAACATCAAGCCCTATACC TCGATGGAGACGATGCACAGCGACATGATGGGGGCGGCCACCGCGTTCTGCACTCTCAAG GCGATCGCGAAACTGCAGCTGCCCATCAACGTTGTGGCCGCGGTCGGACTCGTGGAGAAC GCCATCGGCCCCGAAAGCTACCACCCCTCCTCCATCATTACTAGCCTCAAGGGGCTCACG GTGGAGGTGCTCAACACTGATGCTGAGGGCCGCCTGGTACTGGCAGATGTGCTCACATAC GTGCAGAAGTACGCACCACTCGATAAGAAGCCTACCCGCATCATCGACCTTGCCACGCTC ACAGGTGCCATTATTGTCGGTCTCGGCTCGCGCCGCGCCGGGTTGTTTTCGCCATCTGCG ATGCTGGCGAATTCGCTAATGGCTGCCGGCACTCAGTGCGGGGAGGAGCTGTGGCCGATG CCGATCGGTGACGAGCACAAGGACATGATGAAGGGCGGCATTGCCGATCTGATTAACGCT GCTCCCGGTCGGCAGGCCGGCTCCTGCACCGCCGCCGCGTTCCTCTCCAACTTTGTAGAG CCGGAGGTGCAGTGGGCGCACCTCGATATCGCCGGCGTTGCAGATGTCGGAGACAAGCCC AAGGGCTACGAGCCGGCTGGTGTGACGGGCTTTGGTGTGCAGCTTCTGGTCGACTTCCTG CGCCACAACAAGCCTTAA
  • Download Fasta

  • Fasta :-

    MLRRVLSRGPLPQSLSVGPTSKLTVNKGKLAKSRGVHVHFLTIAECAAAAGDASAPIPPG FTGKAGEVDFQTLWTTAQDPATAESVLRKSGRKAAGARRAAEKPAELVAGMGAHSTVRDY RLAVTAAVRKAKMCNAAWVSLHPPKQDVFTMTDPYHPPQRLKSHEMVEKTAIFAVTGAYQ YDRLKSGTLASKDSAQTGRTRARRAESRAKPPAAPQPPMELVVASSNAQAVRAGEVIGHC VNEARNLGNLREDEGVPEFYAEWAKKYMIPEGIKVRKVLRGQQLEEAGLHLMYNVGRGSR YEPYLVVLEYIGNPRSSATTAIVGKGVTFDCGGLNIKPYTSMETMHSDMMGAATAFCTLK AIAKLQLPINVVAAVGLVENAIGPESYHPSSIITSLKGLTVEVLNTDAEGRLVLADVLTY VQKYAPLDKKPTRIIDLATLTGAIIVGLGSRRAGLFSPSAMLANSLMAAGTQCGEELWPM PIGDEHKDMMKGGIADLINAAPGRQAGSCTAAAFLSNFVEPEVQWAHLDIAGVADVGDKP KGYEPAGVTGFGVQLLVDFLRHNKP

  • title: Substrate-binding/catalytic site
  • coordinates: K325,D330,K337,D348,D407,E409,R411,L440
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.23.0950299 SVGRGSRYEP0.995unspLmjF.23.0950299 SVGRGSRYEP0.995unspLmjF.23.0950299 SVGRGSRYEP0.995unspLmjF.23.095090 SVLRKSGRKA0.996unspLmjF.23.0950163 SQRLKSHEMV0.996unsp

LmjF.23.0950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India