LmjF.31.1130 | amidohydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.1130OTHER0.9998180.0000580.000123
No Results

  • Fasta :-

    >LmjF.31.1130 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIKGELQKMDAEGRWLHI SQPESNCVVADLKGGGGDGPIIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAM LLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEKGCMEGVAMVFAEHIIPMKEG PTGTVLVKRGPFLSSSDTLHVEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPILTITTIASSSDSYNVIPDRVTLKGTLRTQDREVRENAKKAVAEVLHGICGSYGAM CSLNWLPGYDVTVNTDSAYDVGMRVFAQVLPSKDQVVVLSACMSPSEDFSEFAKVAPANY VGIGCYNPGKGCTAVNHNAKFCVDEEAMKVGVKVHYGTIHELLMQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/845 Sequence name : 845 Sequence length : 405 VALUES OF COMPUTED PARAMETERS Coef20 : 3.546 CoefTot : -0.111 ChDiff : -12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.694 0.232 0.545 MesoH : -0.138 0.511 -0.215 0.279 MuHd_075 : 18.219 13.452 4.704 6.258 MuHd_095 : 35.024 19.817 8.295 6.032 MuHd_100 : 28.744 14.991 7.278 4.332 MuHd_105 : 24.005 15.730 7.692 4.378 Hmax_075 : -8.000 6.000 -2.549 2.840 Hmax_095 : -5.337 6.475 -2.733 1.417 Hmax_100 : -5.400 4.800 -2.737 1.080 Hmax_105 : -2.800 9.567 -0.721 2.147 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8769 0.1231 DFMC : 0.9393 0.0607
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 405 LmjF.31.1130 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIKGELQKMDAEGRWLHISQPESNCVVADLKGGGGDGP 80 IIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAMLLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEK 160 GCMEGVAMVFAEHIIPMKEGPTGTVLVKRGPFLSSSDTLHVEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP 240 SKCPILTITTIASSSDSYNVIPDRVTLKGTLRTQDREVRENAKKAVAEVLHGICGSYGAMCSLNWLPGYDVTVNTDSAYD 320 VGMRVFAQVLPSKDQVVVLSACMSPSEDFSEFAKVAPANYVGIGCYNPGKGCTAVNHNAKFCVDEEAMKVGVKVHYGTIH 400 ELLMQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.1130 6 -MPAINR|EE 0.063 . LmjF.31.1130 11 NREELDR|RV 0.178 . LmjF.31.1130 12 REELDRR|VE 0.095 . LmjF.31.1130 24 DQVVAWR|RY 0.087 . LmjF.31.1130 25 QVVAWRR|YI 0.165 . LmjF.31.1130 45 PTAAYIK|GE 0.068 . LmjF.31.1130 50 IKGELQK|MD 0.070 . LmjF.31.1130 56 KMDAEGR|WL 0.112 . LmjF.31.1130 73 CVVADLK|GG 0.065 . LmjF.31.1130 85 GPIIALR|AD 0.118 . LmjF.31.1130 104 DVPFASK|KQ 0.057 . LmjF.31.1130 105 VPFASKK|QG 0.089 . LmjF.31.1130 126 MLLGATK|LL 0.054 . LmjF.31.1130 134 LLEDAGR|IK 0.101 . LmjF.31.1130 136 EDAGRIK|GT 0.071 . LmjF.31.1130 140 RIKGTVR|LL 0.083 . LmjF.31.1130 160 AQMMIEK|GC 0.075 . LmjF.31.1130 178 EHIIPMK|EG 0.061 . LmjF.31.1130 188 TGTVLVK|RG 0.052 . LmjF.31.1130 189 GTVLVKR|GP 0.147 . LmjF.31.1130 206 HVEIIGR|GG 0.101 . LmjF.31.1130 236 LQQVVSR|RM 0.082 . LmjF.31.1130 237 QQVVSRR|MP 0.128 . LmjF.31.1130 242 RRMPPSK|CP 0.073 . LmjF.31.1130 264 YNVIPDR|VT 0.081 . LmjF.31.1130 268 PDRVTLK|GT 0.068 . LmjF.31.1130 272 TLKGTLR|TQ 0.083 . LmjF.31.1130 276 TLRTQDR|EV 0.131 . LmjF.31.1130 279 TQDREVR|EN 0.204 . LmjF.31.1130 283 EVRENAK|KA 0.073 . LmjF.31.1130 284 VRENAKK|AV 0.205 . LmjF.31.1130 324 AYDVGMR|VF 0.086 . LmjF.31.1130 333 AQVLPSK|DQ 0.068 . LmjF.31.1130 354 DFSEFAK|VA 0.079 . LmjF.31.1130 370 GCYNPGK|GC 0.075 . LmjF.31.1130 380 AVNHNAK|FC 0.095 . LmjF.31.1130 389 VDEEAMK|VG 0.055 . LmjF.31.1130 393 AMKVGVK|VH 0.058 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.1130 ATGCCGGCCATCAACCGCGAGGAGCTCGACCGGCGTGTGGAGCAGATCTACGACCAGGTG GTCGCCTGGCGCCGCTACATCCACGAGAACCCGGACCTCTCGTTCGAGGAGCAGCCGACG GCGGCATACATCAAGGGTGAGCTGCAGAAGATGGACGCGGAGGGCAGATGGCTGCACATC AGCCAGCCTGAGAGCAACTGCGTCGTTGCTGACCTGAAGGGTGGCGGTGGCGACGGCCCC ATCATTGCGCTGCGTGCGGACATCGACGCGCTGCCTGTCGAGGAGCTGACGGACGTGCCG TTTGCGTCGAAGAAGCAGGGCGTGATGCACGCGTGCGGCCACGACACGCACGCGGCGATG CTGCTCGGCGCGACGAAGCTGCTGCTGGAGGACGCGGGGAGGATCAAGGGCACCGTGCGC CTGCTGTTTCAGCCTGCGGAGGAGGTGCCGCCGGGTGGCGCCCAGATGATGATCGAGAAG GGCTGCATGGAGGGCGTGGCGATGGTGTTTGCTGAGCACATTATCCCGATGAAGGAGGGT CCTACGGGCACAGTTTTAGTGAAGAGGGGCCCGTTTCTCTCCAGCAGTGACACCCTACAC GTGGAGATAATCGGCCGCGGCGGGCATGCCTCGATGCCGGAGAGCTCCATCGACCCTATC GCGATCGCGTGCCTTGCCGTGACTGCCCTTCAGCAGGTGGTGTCGCGTCGCATGCCGCCA TCCAAGTGTCCAATCTTGACCATCACCACGATAGCCTCGAGCTCTGACAGCTACAACGTG ATCCCTGACAGGGTGACGCTGAAGGGCACGCTGCGCACGCAGGATCGAGAGGTGCGCGAA AACGCCAAAAAGGCCGTCGCTGAGGTGCTTCACGGCATCTGCGGATCGTACGGTGCGATG TGCAGTCTCAACTGGCTTCCTGGCTACGATGTGACGGTGAACACGGACAGCGCGTACGAC GTGGGAATGCGAGTGTTTGCGCAGGTGCTGCCCTCGAAGGACCAGGTCGTAGTACTTTCA GCTTGCATGTCTCCCTCAGAGGACTTCAGCGAGTTTGCGAAGGTGGCACCTGCGAACTAT GTGGGCATCGGGTGCTACAATCCCGGGAAGGGGTGCACTGCGGTGAACCACAACGCAAAG TTCTGCGTGGACGAGGAGGCGATGAAGGTCGGCGTGAAGGTCCACTATGGCACGATTCAC GAGCTGCTCATGCAGTGA
  • Download Fasta

  • Fasta :-

    MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIKGELQKMDAEGRWLHI SQPESNCVVADLKGGGGDGPIIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAM LLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEKGCMEGVAMVFAEHIIPMKEG PTGTVLVKRGPFLSSSDTLHVEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPILTITTIASSSDSYNVIPDRVTLKGTLRTQDREVRENAKKAVAEVLHGICGSYGAM CSLNWLPGYDVTVNTDSAYDVGMRVFAQVLPSKDQVVVLSACMSPSEDFSEFAKVAPANY VGIGCYNPGKGCTAVNHNAKFCVDEEAMKVGVKVHYGTIHELLMQ

  • title: metal binding site
  • coordinates: C112,H114,E147,E148,H173,N376
No Results
No Results
IDSitePeptideScoreMethod
LmjF.31.113034 SNPDLSFEEQ0.997unsp

LmjF.31.1130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India