LmjF.31.1140 | monoglyceride lipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      GO:0020015      

  • Curated_GO_Components:  cytoplasm      glycosome      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.1140OTHER0.9994640.0003460.000190
No Results

  • Fasta :-

    >LmjF.31.1140 MSYYCSGGHCLKYATPGREPPDPQLFPHYMQNAQNLWLHFSEWWPHGDGGSCPAPPTKGV VFIVPGLGEHTGRYDSVALRLNQEGYVVFSMDNQGTGGSEGERLYVECFTHFVDDVCAFV VFIQTRYAALKSQPTFLMGHSMGGLIATLVAQRDASGFRGVVLSGPALGLSKPVPCFMRS LAHFLSQWFPKLPVRKLDPDLVSYNTPVVQLVKQDPFYSNVTLRARFVDEMLIAQDRAAE AAGTSQFPFLIVHGEEDQLCSLETSKSFFKSALSEDKNLVSYPRAGHEVLTELCRAEVMA EVIKFIDERAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/379 Sequence name : 379 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 3.031 CoefTot : -1.204 ChDiff : -6 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.465 0.165 0.605 MesoH : 0.214 0.690 -0.150 0.299 MuHd_075 : 25.726 16.987 8.138 3.235 MuHd_095 : 3.601 3.326 2.392 0.674 MuHd_100 : 5.071 5.195 3.062 1.124 MuHd_105 : 11.329 9.812 4.775 3.610 Hmax_075 : 14.000 10.733 4.864 2.438 Hmax_095 : 5.163 1.200 1.073 1.050 Hmax_100 : 4.800 1.900 1.502 2.210 Hmax_105 : 7.000 4.700 2.244 3.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9736 0.0264 DFMC : 0.8649 0.1351
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 LmjF.31.1140 MSYYCSGGHCLKYATPGREPPDPQLFPHYMQNAQNLWLHFSEWWPHGDGGSCPAPPTKGVVFIVPGLGEHTGRYDSVALR 80 LNQEGYVVFSMDNQGTGGSEGERLYVECFTHFVDDVCAFVVFIQTRYAALKSQPTFLMGHSMGGLIATLVAQRDASGFRG 160 VVLSGPALGLSKPVPCFMRSLAHFLSQWFPKLPVRKLDPDLVSYNTPVVQLVKQDPFYSNVTLRARFVDEMLIAQDRAAE 240 AAGTSQFPFLIVHGEEDQLCSLETSKSFFKSALSEDKNLVSYPRAGHEVLTELCRAEVMAEVIKFIDERAR 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.1140 12 SGGHCLK|YA 0.081 . LmjF.31.1140 18 KYATPGR|EP 0.075 . LmjF.31.1140 58 CPAPPTK|GV 0.095 . LmjF.31.1140 73 LGEHTGR|YD 0.125 . LmjF.31.1140 80 YDSVALR|LN 0.092 . LmjF.31.1140 103 GGSEGER|LY 0.091 . LmjF.31.1140 126 VVFIQTR|YA 0.086 . LmjF.31.1140 131 TRYAALK|SQ 0.102 . LmjF.31.1140 153 ATLVAQR|DA 0.116 . LmjF.31.1140 159 RDASGFR|GV 0.145 . LmjF.31.1140 172 PALGLSK|PV 0.063 . LmjF.31.1140 179 PVPCFMR|SL 0.138 . LmjF.31.1140 191 LSQWFPK|LP 0.070 . LmjF.31.1140 195 FPKLPVR|KL 0.100 . LmjF.31.1140 196 PKLPVRK|LD 0.072 . LmjF.31.1140 213 PVVQLVK|QD 0.053 . LmjF.31.1140 224 YSNVTLR|AR 0.110 . LmjF.31.1140 226 NVTLRAR|FV 0.148 . LmjF.31.1140 237 MLIAQDR|AA 0.154 . LmjF.31.1140 266 CSLETSK|SF 0.074 . LmjF.31.1140 270 TSKSFFK|SA 0.090 . LmjF.31.1140 277 SALSEDK|NL 0.058 . LmjF.31.1140 284 NLVSYPR|AG 0.100 . LmjF.31.1140 295 VLTELCR|AE 0.075 . LmjF.31.1140 304 VMAEVIK|FI 0.071 . LmjF.31.1140 309 IKFIDER|AR 0.087 . LmjF.31.1140 311 FIDERAR|-- 0.092 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.1140 ATGTCGTACTACTGCTCTGGCGGTCATTGCCTGAAGTACGCCACCCCAGGTCGGGAACCA CCCGACCCACAGCTCTTTCCTCACTACATGCAAAATGCACAAAACCTGTGGTTGCACTTC AGCGAGTGGTGGCCGCATGGTGACGGCGGCAGCTGCCCGGCCCCGCCAACTAAAGGCGTC GTTTTTATCGTGCCCGGCTTGGGCGAGCACACCGGCCGCTACGACTCCGTCGCGCTCCGA CTCAACCAGGAGGGCTACGTTGTCTTTTCCATGGACAATCAAGGCACCGGCGGCAGCGAG GGCGAGCGGCTATACGTTGAGTGCTTCACGCACTTCGTCGATGACGTCTGCGCGTTCGTC GTATTCATCCAGACACGGTACGCGGCCCTCAAGAGCCAGCCAACCTTTCTTATGGGGCAC TCGATGGGGGGACTCATTGCCACTCTGGTGGCGCAGAGGGACGCAAGCGGCTTCCGCGGG GTCGTGCTGAGCGGCCCAGCTCTCGGGCTGTCGAAGCCCGTCCCCTGCTTTATGCGGTCG CTTGCGCACTTTCTCTCACAGTGGTTCCCGAAGCTGCCGGTGCGCAAACTCGACCCCGAT CTCGTCAGCTACAACACCCCTGTCGTGCAACTTGTGAAGCAGGACCCGTTTTACTCCAAC GTGACGCTTCGTGCGCGCTTCGTCGATGAGATGCTGATTGCGCAGGATCGCGCCGCGGAA GCCGCGGGAACGTCGCAGTTTCCTTTTTTGATTGTCCACGGCGAGGAGGATCAGCTCTGC TCGTTAGAGACGTCTAAAAGCTTCTTCAAGAGCGCTCTGTCAGAGGACAAGAATCTGGTC TCCTACCCCCGTGCTGGGCATGAAGTACTGACGGAGCTGTGTCGAGCTGAGGTGATGGCA GAGGTGATAAAGTTCATCGACGAGCGGGCGAGGTGA
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  • Fasta :-

    MSYYCSGGHCLKYATPGREPPDPQLFPHYMQNAQNLWLHFSEWWPHGDGGSCPAPPTKGV VFIVPGLGEHTGRYDSVALRLNQEGYVVFSMDNQGTGGSEGERLYVECFTHFVDDVCAFV VFIQTRYAALKSQPTFLMGHSMGGLIATLVAQRDASGFRGVVLSGPALGLSKPVPCFMRS LAHFLSQWFPKLPVRKLDPDLVSYNTPVVQLVKQDPFYSNVTLRARFVDEMLIAQDRAAE AAGTSQFPFLIVHGEEDQLCSLETSKSFFKSALSEDKNLVSYPRAGHEVLTELCRAEVMA EVIKFIDERAR

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LmjF.31.1140156 SQRDASGFRG0.993unsp

LmjF.31.1140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India