LmjF.31.2000 | GP63-like protein, leishmanolysin-like protein

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.2000SP0.0392340.9586440.002122CS pos: 28-29. TAA-AP. Pr: 0.4214
No Results

  • Fasta :-

    >LmjF.31.2000 MSHVPAVLWRMELWLCALFIYAAFTTAAAPSSCGHSQIVHKQGHLPLTYAALRNNGNGLR YQVEMDLERWNGSATDEQRAVEPQATVTISSDREDSEWAPIRIAVFMPDLEDESKYCTAI GQMRPDSSGSLVPCTSNADLLTDAKKTVLINSILPQAVNMHAQRLKVRRPAASTSIVVNS MPGSYCGSFTVPTAHRTTGVPDADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATVTSRP AVGVMYFNPRYLPTSEGETQEHVDRYGGNPSGSTNRLRRVASHELLHALGFTSSVFKARG MFATVPSLRGKRNVPVLNSSAVRAAAKAKYGISDTEVFYGVELEDQGAPGTSLSHWKRRA AKDELMAPVFGLARYSSLSLAALEDMGFYKVDFSKAEPVALGATAGGKLFTEPCLTEGTS NTPTVFCDSLSASVRSCTADRLSIGRCALTTYSSALPSYAQYFPNQPTLGGSLSHSDYCP VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKNASRTY EVLVIGANSWLSCGAGGTGVTVQPAVSSPNVFLKGGRIACPPYDDVCYANPVAFAEVEAP PTTSTTASPSAATAATHGMVVSGLVAVAVLLGVCIC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/107 Sequence name : 107 Sequence length : 636 VALUES OF COMPUTED PARAMETERS Coef20 : 4.618 CoefTot : -1.301 ChDiff : 1 ZoneTo : 63 KR : 4 DE : 1 CleavSite : 62 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.829 0.677 0.838 MesoH : 0.411 0.738 -0.023 0.346 MuHd_075 : 21.362 23.112 9.440 6.728 MuHd_095 : 25.889 19.916 6.864 5.954 MuHd_100 : 25.657 14.641 5.192 5.495 MuHd_105 : 27.835 14.963 6.668 6.117 Hmax_075 : 15.167 15.167 4.548 5.378 Hmax_095 : 8.750 11.200 1.468 4.086 Hmax_100 : 5.100 24.500 -0.330 3.210 Hmax_105 : 9.917 19.863 1.391 4.853 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7718 0.2282 DFMC : 0.8503 0.1497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 636 LmjF.31.2000 MSHVPAVLWRMELWLCALFIYAAFTTAAAPSSCGHSQIVHKQGHLPLTYAALRNNGNGLRYQVEMDLERWNGSATDEQRA 80 VEPQATVTISSDREDSEWAPIRIAVFMPDLEDESKYCTAIGQMRPDSSGSLVPCTSNADLLTDAKKTVLINSILPQAVNM 160 HAQRLKVRRPAASTSIVVNSMPGSYCGSFTVPTAHRTTGVPDADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATVTSRP 240 AVGVMYFNPRYLPTSEGETQEHVDRYGGNPSGSTNRLRRVASHELLHALGFTSSVFKARGMFATVPSLRGKRNVPVLNSS 320 AVRAAAKAKYGISDTEVFYGVELEDQGAPGTSLSHWKRRAAKDELMAPVFGLARYSSLSLAALEDMGFYKVDFSKAEPVA 400 LGATAGGKLFTEPCLTEGTSNTPTVFCDSLSASVRSCTADRLSIGRCALTTYSSALPSYAQYFPNQPTLGGSLSHSDYCP 480 VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKNASRTYEVLVIGANSWLSCGAGGTGV 560 TVQPAVSSPNVFLKGGRIACPPYDDVCYANPVAFAEVEAPPTTSTTASPSAATAATHGMVVSGLVAVAVLLGVCIC 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................P......................................... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.2000 10 VPAVLWR|ME 0.084 . LmjF.31.2000 41 HSQIVHK|QG 0.067 . LmjF.31.2000 53 LTYAALR|NN 0.102 . LmjF.31.2000 60 NNGNGLR|YQ 0.070 . LmjF.31.2000 69 VEMDLER|WN 0.092 . LmjF.31.2000 79 SATDEQR|AV 0.164 . LmjF.31.2000 93 VTISSDR|ED 0.081 . LmjF.31.2000 102 SEWAPIR|IA 0.101 . LmjF.31.2000 115 DLEDESK|YC 0.072 . LmjF.31.2000 124 TAIGQMR|PD 0.094 . LmjF.31.2000 145 DLLTDAK|KT 0.055 . LmjF.31.2000 146 LLTDAKK|TV 0.087 . LmjF.31.2000 164 VNMHAQR|LK 0.074 . LmjF.31.2000 166 MHAQRLK|VR 0.065 . LmjF.31.2000 168 AQRLKVR|RP 0.088 . LmjF.31.2000 169 QRLKVRR|PA 0.159 . LmjF.31.2000 196 TVPTAHR|TT 0.092 . LmjF.31.2000 218 GPTSTPK|SF 0.086 . LmjF.31.2000 239 TATVTSR|PA 0.108 . LmjF.31.2000 250 VMYFNPR|YL 0.112 . LmjF.31.2000 265 TQEHVDR|YG 0.099 . LmjF.31.2000 276 PSGSTNR|LR 0.075 . LmjF.31.2000 278 GSTNRLR|RV 0.123 . LmjF.31.2000 279 STNRLRR|VA 0.715 *ProP* LmjF.31.2000 297 FTSSVFK|AR 0.072 . LmjF.31.2000 299 SSVFKAR|GM 0.167 . LmjF.31.2000 309 ATVPSLR|GK 0.084 . LmjF.31.2000 311 VPSLRGK|RN 0.078 . LmjF.31.2000 312 PSLRGKR|NV 0.449 . LmjF.31.2000 323 LNSSAVR|AA 0.132 . LmjF.31.2000 327 AVRAAAK|AK 0.076 . LmjF.31.2000 329 RAAAKAK|YG 0.078 . LmjF.31.2000 357 TSLSHWK|RR 0.065 . LmjF.31.2000 358 SLSHWKR|RA 0.378 . LmjF.31.2000 359 LSHWKRR|AA 0.466 . LmjF.31.2000 362 WKRRAAK|DE 0.193 . LmjF.31.2000 374 PVFGLAR|YS 0.092 . LmjF.31.2000 390 EDMGFYK|VD 0.062 . LmjF.31.2000 395 YKVDFSK|AE 0.068 . LmjF.31.2000 408 GATAGGK|LF 0.055 . LmjF.31.2000 435 SLSASVR|SC 0.195 . LmjF.31.2000 441 RSCTADR|LS 0.073 . LmjF.31.2000 446 DRLSIGR|CA 0.086 . LmjF.31.2000 508 ITGDNAR|CF 0.103 . LmjF.31.2000 518 ADNLLVK|FT 0.083 . LmjF.31.2000 530 PGAICAK|VH 0.061 . LmjF.31.2000 534 CAKVHCK|NA 0.079 . LmjF.31.2000 538 HCKNASR|TY 0.082 . LmjF.31.2000 574 SPNVFLK|GG 0.084 . LmjF.31.2000 577 VFLKGGR|IA 0.081 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.2000 ATGTCGCATGTGCCCGCCGTGCTGTGGCGTATGGAGCTGTGGCTGTGTGCTCTCTTCATT TACGCAGCTTTCACCACAGCCGCGGCACCGTCCTCGTGCGGGCACAGCCAGATCGTCCAC AAGCAAGGTCACCTCCCTCTCACATACGCAGCGCTGCGCAACAATGGCAACGGGCTGCGC TATCAGGTCGAAATGGACCTCGAGCGATGGAATGGCTCAGCCACCGACGAACAGCGTGCC GTCGAGCCACAGGCCACTGTCACGATCAGCAGCGACAGAGAGGACTCGGAGTGGGCCCCC ATCCGCATTGCTGTCTTCATGCCCGATCTGGAGGACGAATCGAAGTACTGCACAGCCATT GGTCAGATGCGCCCCGATTCCAGCGGCTCCCTGGTACCGTGCACCAGCAACGCTGATCTC TTGACGGATGCGAAAAAGACCGTGCTGATCAACTCTATACTACCCCAGGCAGTCAACATG CACGCGCAGCGACTGAAGGTGCGTCGGCCGGCGGCCAGCACCTCCATCGTTGTGAACTCC ATGCCGGGGTCATACTGCGGCTCCTTCACCGTCCCGACAGCGCACCGGACAACGGGCGTG CCGGACGCGGATTTTGTCGTCTACGTGGCAGCGGGTCCGACATCTACTCCGAAGAGCTTC ATTGCGTGGGCTGTTACTTGCCAGTATTACCCCAACACGGCCACGGTCACGAGCCGCCCA GCTGTGGGAGTGATGTACTTCAACCCGCGCTACCTGCCGACCTCGGAAGGGGAGACGCAA GAGCACGTTGACCGTTACGGAGGCAACCCGTCTGGCAGCACAAATCGCCTTCGCCGCGTT GCCAGCCATGAACTGCTGCACGCGCTCGGCTTCACCTCAAGCGTCTTCAAGGCGCGCGGC ATGTTTGCCACCGTCCCGTCTCTGCGTGGAAAAAGGAACGTACCGGTGCTGAACTCATCG GCTGTGCGCGCGGCTGCCAAGGCCAAGTACGGCATCTCTGACACAGAGGTGTTTTACGGC GTCGAGCTGGAAGATCAAGGCGCGCCGGGCACGTCACTTTCGCACTGGAAGCGCCGCGCC GCGAAGGATGAGCTGATGGCTCCTGTGTTCGGTCTGGCACGCTACAGCTCCTTGTCGCTC GCTGCCCTGGAGGATATGGGCTTCTACAAAGTCGACTTCAGTAAGGCCGAGCCTGTTGCC CTCGGCGCCACTGCAGGGGGTAAGCTCTTCACAGAGCCATGCTTGACGGAAGGCACCTCC AACACCCCTACGGTGTTCTGCGACAGCCTCAGCGCCTCGGTGCGCAGCTGCACGGCGGAC CGGTTGAGCATTGGTCGGTGCGCCCTCACTACCTACTCCTCGGCTCTGCCAAGCTATGCG CAGTACTTCCCTAATCAGCCGACCCTCGGTGGCTCTCTGTCGCACAGCGACTACTGCCCC GTGATACAGCCCCTCTCCAACACCGGGTGCAGTGGCGGCTCGCTAGGTGCGATGCCGGGC AGCATCACTGGTGATAACGCGCGCTGCTTCGACGCAGACAATCTGCTGGTAAAGTTCACA TTCACTCAGCCTGGTGCCATCTGTGCCAAGGTACACTGCAAGAACGCGTCTCGCACCTAT GAGGTGCTCGTGATCGGCGCGAACAGCTGGCTCTCGTGTGGCGCCGGTGGCACTGGGGTG ACGGTGCAGCCAGCAGTGAGTAGCCCCAACGTGTTCCTGAAGGGCGGCCGTATTGCCTGT CCGCCTTACGACGATGTGTGCTACGCGAACCCGGTCGCCTTCGCGGAAGTGGAAGCGCCC CCCACCACCTCCACAACAGCCTCACCAAGCGCGGCTACAGCTGCCACGCACGGAATGGTC GTTAGCGGCCTTGTTGCTGTTGCTGTGTTGCTCGGTGTGTGCATCTGCTAA
  • Download Fasta

  • Fasta :-

    MSHVPAVLWRMELWLCALFIYAAFTTAAAPSSCGHSQIVHKQGHLPLTYAALRNNGNGLR YQVEMDLERWNGSATDEQRAVEPQATVTISSDREDSEWAPIRIAVFMPDLEDESKYCTAI GQMRPDSSGSLVPCTSNADLLTDAKKTVLINSILPQAVNMHAQRLKVRRPAASTSIVVNS MPGSYCGSFTVPTAHRTTGVPDADFVVYVAAGPTSTPKSFIAWAVTCQYYPNTATVTSRP AVGVMYFNPRYLPTSEGETQEHVDRYGGNPSGSTNRLRRVASHELLHALGFTSSVFKARG MFATVPSLRGKRNVPVLNSSAVRAAAKAKYGISDTEVFYGVELEDQGAPGTSLSHWKRRA AKDELMAPVFGLARYSSLSLAALEDMGFYKVDFSKAEPVALGATAGGKLFTEPCLTEGTS NTPTVFCDSLSASVRSCTADRLSIGRCALTTYSSALPSYAQYFPNQPTLGGSLSHSDYCP VIQPLSNTGCSGGSLGAMPGSITGDNARCFDADNLLVKFTFTQPGAICAKVHCKNASRTY EVLVIGANSWLSCGAGGTGVTVQPAVSSPNVFLKGGRIACPPYDDVCYANPVAFAEVEAP PTTSTTASPSAATAATHGMVVSGLVAVAVLLGVCIC

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.200091 SVTISSDRED0.994unspLmjF.31.2000255 SYLPTSEGET0.996unsp

LmjF.31.2000      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India