LmjF.33.0400 | serine peptidase, Clan SC, Family S9D

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_IDPredictionOTHERSPmTPCS_Position
LmjF.33.0400OTHER0.9415230.0003150.058162
No Results

  • Fasta :-

    >LmjF.33.0400 MLQSLVNSIVFVPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDPKGDLVTKDNP ERVVRSSMVLLFHHGNAEDLGSAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAAKPAEV TEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACYLAEKHHKKVGGLVLISTFTS CLRVVSSCCLPYLCCCVDLFPNYRRIEHIMECPVLVMHGTHDNVVPHHCSSELLEDIVAR RNNALQRLLKKREGARANQAKRSSVLGAASTGPTNTTTASATIIVADEALVTAQPPLDGE TVSVFDLYRRAYDGLPEAVRRVAEGRLDVTAADASIGVFHRWFAGCGHNDIEAREGHAFS DMFDYFVRFSTAFSMEREALLLAKPVTGAAKASRDSLNRADSEVRE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/10 Sequence name : 10 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 3.923 CoefTot : -0.891 ChDiff : 1 ZoneTo : 40 KR : 7 DE : 1 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.647 1.841 0.650 0.613 MesoH : 0.010 0.721 -0.076 0.296 MuHd_075 : 22.878 18.811 6.291 4.561 MuHd_095 : 27.432 20.189 7.684 7.721 MuHd_100 : 29.156 23.061 8.593 8.378 MuHd_105 : 30.099 22.776 7.526 8.084 Hmax_075 : 0.817 7.700 -0.283 3.220 Hmax_095 : 8.225 16.800 0.825 4.541 Hmax_100 : 6.600 15.800 1.003 5.020 Hmax_105 : 2.000 13.125 -1.849 4.235 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7630 0.2370 DFMC : 0.8450 0.1550
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 LmjF.33.0400 MLQSLVNSIVFVPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDPKGDLVTKDNPERVVRSSMVLLFHHGNAEDL 80 GSAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAAKPAEVTEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACY 160 LAEKHHKKVGGLVLISTFTSCLRVVSSCCLPYLCCCVDLFPNYRRIEHIMECPVLVMHGTHDNVVPHHCSSELLEDIVAR 240 RNNALQRLLKKREGARANQAKRSSVLGAASTGPTNTTTASATIIVADEALVTAQPPLDGETVSVFDLYRRAYDGLPEAVR 320 RVAEGRLDVTAADASIGVFHRWFAGCGHNDIEAREGHAFSDMFDYFVRFSTAFSMEREALLLAKPVTGAAKASRDSLNRA 400 DSEVRE 480 ................................................................P............... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.0400 15 IVFVPPR|DP 0.100 . LmjF.33.0400 22 DPNSLQR|VQ 0.078 . LmjF.33.0400 28 RVQLLQR|KR 0.079 . LmjF.33.0400 29 VQLLQRK|RH 0.060 . LmjF.33.0400 30 QLLQRKR|HM 0.129 . LmjF.33.0400 37 HMSFTSK|KS 0.076 . LmjF.33.0400 38 MSFTSKK|SG 0.171 . LmjF.33.0400 42 SKKSGER|IS 0.074 . LmjF.33.0400 51 YFHFDPK|GD 0.062 . LmjF.33.0400 57 KGDLVTK|DN 0.063 . LmjF.33.0400 62 TKDNPER|VV 0.110 . LmjF.33.0400 65 NPERVVR|SS 0.507 *ProP* LmjF.33.0400 116 GFPDAAK|PA 0.080 . LmjF.33.0400 123 PAEVTEK|SV 0.106 . LmjF.33.0400 145 LGYPAHR|II 0.094 . LmjF.33.0400 151 RIIIVGR|SV 0.424 . LmjF.33.0400 164 ACYLAEK|HH 0.062 . LmjF.33.0400 167 LAEKHHK|KV 0.096 . LmjF.33.0400 168 AEKHHKK|VG 0.123 . LmjF.33.0400 183 TFTSCLR|VV 0.081 . LmjF.33.0400 204 DLFPNYR|RI 0.096 . LmjF.33.0400 205 LFPNYRR|IE 0.115 . LmjF.33.0400 240 LEDIVAR|RN 0.096 . LmjF.33.0400 241 EDIVARR|NN 0.106 . LmjF.33.0400 247 RNNALQR|LL 0.116 . LmjF.33.0400 250 ALQRLLK|KR 0.120 . LmjF.33.0400 251 LQRLLKK|RE 0.097 . LmjF.33.0400 252 QRLLKKR|EG 0.172 . LmjF.33.0400 256 KKREGAR|AN 0.117 . LmjF.33.0400 261 ARANQAK|RS 0.095 . LmjF.33.0400 262 RANQAKR|SS 0.325 . LmjF.33.0400 309 SVFDLYR|RA 0.115 . LmjF.33.0400 310 VFDLYRR|AY 0.110 . LmjF.33.0400 320 GLPEAVR|RV 0.102 . LmjF.33.0400 321 LPEAVRR|VA 0.213 . LmjF.33.0400 326 RRVAEGR|LD 0.098 . LmjF.33.0400 341 SIGVFHR|WF 0.120 . LmjF.33.0400 354 HNDIEAR|EG 0.099 . LmjF.33.0400 368 MFDYFVR|FS 0.085 . LmjF.33.0400 377 TAFSMER|EA 0.072 . LmjF.33.0400 384 EALLLAK|PV 0.078 . LmjF.33.0400 391 PVTGAAK|AS 0.068 . LmjF.33.0400 394 GAAKASR|DS 0.108 . LmjF.33.0400 399 SRDSLNR|AD 0.117 . LmjF.33.0400 405 RADSEVR|E- 0.078 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.0400 ATGTTGCAGTCGCTCGTGAACAGCATCGTCTTTGTGCCCCCACGGGACCCGAACAGTCTG CAGCGGGTGCAGCTGCTGCAGCGCAAGCGGCACATGAGCTTTACGAGCAAGAAGAGCGGC GAGAGAATTTCATACTTCCACTTCGACCCAAAAGGCGATCTCGTGACCAAGGACAACCCC GAACGGGTCGTACGCTCCTCCATGGTCTTGCTCTTCCACCACGGCAACGCGGAGGACCTC GGCAGCGCCTTCAGCTACGCGCAGTCTATGGCCTGCGTCTTTGGGGTGGCGGTGGTGGTG TACGACTACTGCGGCTACGGTTTTTCTGGCTTTCCCGACGCTGCGAAGCCGGCGGAGGTG ACGGAGAAGAGCGTCTACAGCGACGCCGATCACATGTACGCCCACCTCCTCTCCCTCGGC TACCCCGCTCACCGCATTATTATTGTTGGCCGCTCCGTCGGGGGTGGGCCGGCGTGCTAC CTCGCTGAGAAGCATCACAAGAAGGTGGGGGGCTTAGTGCTTATATCGACATTCACCTCC TGCCTCCGCGTCGTCTCGTCTTGTTGCCTTCCGTACTTGTGCTGCTGCGTTGACTTGTTT CCTAACTACCGCCGCATCGAGCACATCATGGAGTGCCCGGTGCTGGTGATGCACGGAACC CACGACAACGTCGTCCCGCACCATTGCTCGAGCGAGTTGCTCGAGGACATCGTAGCGCGC CGCAACAACGCGTTGCAACGACTCTTGAAGAAGCGTGAGGGGGCGCGGGCAAATCAGGCG AAACGCTCAAGTGTGCTGGGCGCTGCCTCAACAGGGCCAACAAACACTACGACGGCATCC GCGACTATCATCGTTGCTGACGAGGCGCTCGTCACCGCCCAGCCACCCCTTGATGGAGAG ACGGTCAGTGTGTTCGATCTCTATCGCCGCGCCTACGATGGCCTGCCCGAGGCGGTACGG CGGGTGGCGGAGGGGCGTCTCGACGTGACCGCTGCCGACGCCAGCATTGGGGTCTTTCAC AGGTGGTTTGCGGGCTGCGGGCACAACGACATCGAGGCACGCGAGGGGCACGCCTTCTCC GACATGTTCGACTATTTCGTGCGCTTTTCGACCGCCTTCTCGATGGAGCGGGAGGCGCTC CTGCTGGCCAAGCCGGTCACCGGTGCAGCTAAGGCATCTCGCGACTCTTTAAACAGGGCT GACAGTGAGGTCCGCGAGTAG
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  • Fasta :-

    MLQSLVNSIVFVPPRDPNSLQRVQLLQRKRHMSFTSKKSGERISYFHFDPKGDLVTKDNP ERVVRSSMVLLFHHGNAEDLGSAFSYAQSMACVFGVAVVVYDYCGYGFSGFPDAAKPAEV TEKSVYSDADHMYAHLLSLGYPAHRIIIVGRSVGGGPACYLAEKHHKKVGGLVLISTFTS CLRVVSSCCLPYLCCCVDLFPNYRRIEHIMECPVLVMHGTHDNVVPHHCSSELLEDIVAR RNNALQRLLKKREGARANQAKRSSVLGAASTGPTNTTTASATIIVADEALVTAQPPLDGE TVSVFDLYRRAYDGLPEAVRRVAEGRLDVTAADASIGVFHRWFAGCGHNDIEAREGHAFS DMFDYFVRFSTAFSMEREALLLAKPVTGAAKASRDSLNRADSEVRE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.0400396 SASRDSLNRA0.996unspLmjF.33.0400396 SASRDSLNRA0.996unspLmjF.33.0400396 SASRDSLNRA0.996unspLmjF.33.0400402 SNRADSEVRE0.992unspLmjF.33.040039 STSKKSGERI0.996unspLmjF.33.0400374 SSTAFSMERE0.991unsp

LmjF.33.0400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India