LmjF.33.1610 | cytosolic nonspecific dipeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.33.1610OTHER0.9992040.0007360.000060
No Results

  • Fasta :-

    >LmjF.33.1610 MSDCHWAVIRKAVEAEWDASIIPALAAYIEVPNQSPDFDPQWATNGLLTKAFTILINWMK GQNLLGLSYELMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLHPWGEGLDPHKAV VRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMICLDSACLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKAVPFKEQFAMADGVSAEPGDNV ELALRNFWKPSLTVTGSNLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVA NPPYGAKVWFEPEVPGDGCATPELKPWLVTALNEGSKMAYGNPLAFQGMGASIPFISMLL KAYPQAQFVVTGVLGPKSNAHGPNEFLHIEYAKGLTFAISRVVAEHFSHTPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/223 Sequence name : 223 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 4.049 CoefTot : 0.112 ChDiff : -13 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.818 1.524 0.193 0.641 MesoH : 0.062 0.384 -0.280 0.316 MuHd_075 : 11.158 13.229 5.833 4.111 MuHd_095 : 37.283 20.724 9.370 6.636 MuHd_100 : 32.701 17.045 7.562 5.581 MuHd_105 : 22.152 10.637 4.523 3.965 Hmax_075 : 1.700 9.800 -0.614 3.170 Hmax_095 : 3.588 10.850 -0.008 3.964 Hmax_100 : 1.100 7.500 -1.434 3.240 Hmax_105 : 9.900 10.200 0.054 3.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7646 0.2354 DFMC : 0.8883 0.1117
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 LmjF.33.1610 MSDCHWAVIRKAVEAEWDASIIPALAAYIEVPNQSPDFDPQWATNGLLTKAFTILINWMKGQNLLGLSYELMEVEGRTPF 80 LLVEIAGTEPTKNTLLMYGHMDKQPPLHPWGEGLDPHKAVVRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIV 160 VIEACEESGSFDLDYYMERCKERIGNVDLMICLDSACLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR 240 IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKAVPFKEQFAMADGVSAEPGDNVELALRNFWKPSLTVTGSNLP 320 EPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVANPPYGAKVWFEPEVPGDGCATPELKPWLVTALNEGSKMAY 400 GNPLAFQGMGASIPFISMLLKAYPQAQFVVTGVLGPKSNAHGPNEFLHIEYAKGLTFAISRVVAEHFSHTPK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.1610 10 CHWAVIR|KA 0.111 . LmjF.33.1610 11 HWAVIRK|AV 0.194 . LmjF.33.1610 50 TNGLLTK|AF 0.072 . LmjF.33.1610 60 ILINWMK|GQ 0.065 . LmjF.33.1610 77 LMEVEGR|TP 0.070 . LmjF.33.1610 92 AGTEPTK|NT 0.062 . LmjF.33.1610 103 MYGHMDK|QP 0.058 . LmjF.33.1610 118 EGLDPHK|AV 0.067 . LmjF.33.1610 122 PHKAVVR|DG 0.093 . LmjF.33.1610 125 AVVRDGK|LY 0.168 . LmjF.33.1610 129 DGKLYGR|GG 0.078 . LmjF.33.1610 150 SVSVLQR|HG 0.123 . LmjF.33.1610 157 HGIPHGR|VI 0.108 . LmjF.33.1610 179 LDYYMER|CK 0.093 . LmjF.33.1610 181 YYMERCK|ER 0.057 . LmjF.33.1610 183 MERCKER|IG 0.098 . LmjF.33.1610 210 WLTTSLR|GV 0.123 . LmjF.33.1610 240 VVPDTFR|IA 0.087 . LmjF.33.1610 243 DTFRIAR|EL 0.200 . LmjF.33.1610 248 ARELLDR|VE 0.080 . LmjF.33.1610 253 DRVEDSK|TG 0.059 . LmjF.33.1610 256 EDSKTGK|VL 0.077 . LmjF.33.1610 272 IPDYVVK|SM 0.080 . LmjF.33.1610 278 KSMESMK|AV 0.094 . LmjF.33.1610 283 MKAVPFK|EQ 0.090 . LmjF.33.1610 305 NVELALR|NF 0.063 . LmjF.33.1610 309 ALRNFWK|PS 0.076 . LmjF.33.1610 330 IAGNVIR|TH 0.090 . LmjF.33.1610 336 RTHTSLK|LS 0.062 . LmjF.33.1610 340 SLKLSLR|VP 0.070 . LmjF.33.1610 349 PLVDAEK|AT 0.065 . LmjF.33.1610 356 ATQAMAK|VL 0.071 . LmjF.33.1610 367 NPPYGAK|VW 0.061 . LmjF.33.1610 385 CATPELK|PW 0.054 . LmjF.33.1610 397 ALNEGSK|MA 0.069 . LmjF.33.1610 421 FISMLLK|AY 0.078 . LmjF.33.1610 437 TGVLGPK|SN 0.081 . LmjF.33.1610 453 LHIEYAK|GL 0.074 . LmjF.33.1610 461 LTFAISR|VV 0.096 . LmjF.33.1610 472 HFSHTPK|-- 0.081 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.1610 ATGAGCGACTGTCACTGGGCTGTGATTCGAAAGGCCGTGGAGGCCGAGTGGGACGCCTCC ATCATTCCTGCGCTGGCCGCCTACATTGAAGTGCCGAACCAGAGCCCCGACTTCGACCCC CAGTGGGCAACGAACGGACTCTTAACGAAGGCCTTTACCATTCTGATCAACTGGATGAAG GGGCAGAACCTGCTGGGCCTCAGCTACGAGTTGATGGAGGTCGAGGGAAGGACGCCGTTC CTCCTCGTCGAGATCGCCGGGACGGAGCCGACCAAGAACACCCTGCTCATGTACGGCCAC ATGGATAAGCAGCCGCCTCTCCACCCGTGGGGCGAAGGCCTTGACCCCCACAAGGCGGTC GTGCGCGATGGCAAGCTGTACGGCCGCGGCGGCGCTGACGACGGCTACGCGCTCTTTTCG GCCATCACGTCCGTCTCGGTGTTGCAGCGCCACGGCATTCCGCACGGTCGAGTGATCGTG GTCATTGAAGCGTGCGAAGAGTCTGGCAGCTTCGACCTGGACTACTACATGGAGCGCTGC AAGGAGCGCATCGGCAACGTGGATTTGATGATCTGCCTAGACAGCGCCTGTCTCAACTAC TCGCAGGTATGGCTCACGACGTCGTTGCGTGGTGTGACGGGTGGTGTGCTGAACGTGCAG ACGCTGACGGAGAGCATGCACAGTGGCGTCGCCGGCGGCGTCGTGCCGGACACGTTCCGC ATTGCACGTGAACTGCTGGACCGCGTCGAGGATTCAAAGACCGGAAAGGTGCTCTTCCCT GAGGCCTACTGCGAGATTCCCGACTACGTTGTCAAGTCCATGGAATCGATGAAGGCCGTG CCGTTCAAGGAGCAGTTTGCCATGGCCGACGGCGTGTCGGCAGAGCCAGGCGACAATGTG GAGCTGGCGCTGCGAAACTTCTGGAAGCCGAGCCTCACCGTGACAGGGTCCAACCTGCCG GAGCCACAGATTGCCGGCAACGTAATCCGGACGCACACCTCGCTGAAGCTGTCCCTCCGC GTGCCGCCGCTGGTGGACGCGGAGAAAGCTACCCAGGCCATGGCCAAGGTGCTTGTGGCC AACCCGCCGTATGGCGCTAAGGTGTGGTTTGAGCCCGAGGTTCCCGGCGATGGCTGCGCG ACCCCAGAGCTGAAGCCGTGGCTCGTGACCGCGCTCAATGAGGGCAGCAAGATGGCGTAC GGCAACCCGCTCGCATTCCAGGGCATGGGCGCCTCGATCCCATTCATCTCCATGCTCCTC AAAGCATACCCGCAAGCGCAGTTCGTTGTCACCGGCGTCCTCGGTCCAAAGAGCAACGCG CACGGCCCCAATGAGTTTCTGCACATCGAATACGCTAAAGGACTCACGTTCGCCATCAGC CGCGTTGTCGCCGAGCACTTCAGCCACACTCCCAAGTGA
  • Download Fasta

  • Fasta :-

    MSDCHWAVIRKAVEAEWDASIIPALAAYIEVPNQSPDFDPQWATNGLLTKAFTILINWMK GQNLLGLSYELMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLHPWGEGLDPHKAV VRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMICLDSACLNYSQVWLTTSLRGVTGGVLNVQTLTESMHSGVAGGVVPDTFR IARELLDRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKAVPFKEQFAMADGVSAEPGDNV ELALRNFWKPSLTVTGSNLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVA NPPYGAKVWFEPEVPGDGCATPELKPWLVTALNEGSKMAYGNPLAFQGMGASIPFISMLL KAYPQAQFVVTGVLGPKSNAHGPNEFLHIEYAKGLTFAISRVVAEHFSHTPK

  • title: metal binding site
  • coordinates: H100,D133,E166,E167,D194,H441
No Results
No Results
No Results

LmjF.33.1610      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India