LmjF.35.4020 | Bem46-like serine peptidase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005783      

  • Curated_GO_Components:  endoplasmic reticulum      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.35.4020OTHER0.9934140.0061440.000442
No Results

  • Fasta :-

    >LmjF.35.4020 MSFGSFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNQLLYYPHIPPESREVCEDPVALG IPYAERVCVTTADKVRLWGYMLWPAPAPSAEKSGNASVPDSIGRASSNVATAEGGMHVEV DAPGSATDSTSASNMVSGSSRSVTMSSGMPSFVMLYFHGNAGNVGHRLPLAQAFVTHLKC AVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL AANERYGRRIAAVIVENSFSSISDMASALSRPILTKLASRCPDLAVGIFEYYVKPLALRI SWNSAQKITKVVVPMLFLSGMRDEIVPPEQMRTLYKAATKCLRDGNGGELTIPLRRFLEF EDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/859 Sequence name : 859 Sequence length : 394 VALUES OF COMPUTED PARAMETERS Coef20 : 4.570 CoefTot : -0.799 ChDiff : -3 ZoneTo : 47 KR : 2 DE : 0 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.165 2.606 0.419 0.861 MesoH : 0.146 0.600 -0.248 0.246 MuHd_075 : 22.796 13.978 5.789 4.853 MuHd_095 : 16.627 16.111 4.694 4.874 MuHd_100 : 15.983 15.505 4.755 4.421 MuHd_105 : 13.061 14.290 4.427 3.756 Hmax_075 : 19.717 -1.400 -0.210 6.953 Hmax_095 : 9.887 9.188 0.099 6.737 Hmax_100 : 5.200 8.200 -0.806 2.600 Hmax_105 : 5.367 10.900 -0.186 7.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9180 0.0820 DFMC : 0.9310 0.0690
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 394 LmjF.35.4020 MSFGSFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNQLLYYPHIPPESREVCEDPVALGIPYAERVCVTTADKVRLWGY 80 MLWPAPAPSAEKSGNASVPDSIGRASSNVATAEGGMHVEVDAPGSATDSTSASNMVSGSSRSVTMSSGMPSFVMLYFHGN 160 AGNVGHRLPLAQAFVTHLKCAVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL 240 AANERYGRRIAAVIVENSFSSISDMASALSRPILTKLASRCPDLAVGIFEYYVKPLALRISWNSAQKITKVVVPMLFLSG 320 MRDEIVPPEQMRTLYKAATKCLRDGNGGELTIPLRRFLEFEDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.35.4020 31 LHIMSYR|YR 0.118 . LmjF.35.4020 33 IMSYRYR|SQ 0.174 . LmjF.35.4020 50 HIPPESR|EV 0.103 . LmjF.35.4020 66 GIPYAER|VC 0.066 . LmjF.35.4020 74 CVTTADK|VR 0.052 . LmjF.35.4020 76 TTADKVR|LW 0.122 . LmjF.35.4020 92 PAPSAEK|SG 0.071 . LmjF.35.4020 104 VPDSIGR|AS 0.098 . LmjF.35.4020 141 MVSGSSR|SV 0.326 . LmjF.35.4020 167 AGNVGHR|LP 0.075 . LmjF.35.4020 179 AFVTHLK|CA 0.062 . LmjF.35.4020 188 VMMVDYR|GF 0.108 . LmjF.35.4020 219 YLWQDPR|VP 0.074 . LmjF.35.4020 222 QDPRVPR|DR 0.354 . LmjF.35.4020 224 PRVPRDR|II 0.105 . LmjF.35.4020 245 HLAANER|YG 0.084 . LmjF.35.4020 248 ANERYGR|RI 0.220 . LmjF.35.4020 249 NERYGRR|IA 0.145 . LmjF.35.4020 271 MASALSR|PI 0.128 . LmjF.35.4020 276 SRPILTK|LA 0.081 . LmjF.35.4020 280 LTKLASR|CP 0.078 . LmjF.35.4020 294 IFEYYVK|PL 0.058 . LmjF.35.4020 299 VKPLALR|IS 0.069 . LmjF.35.4020 307 SWNSAQK|IT 0.074 . LmjF.35.4020 310 SAQKITK|VV 0.084 . LmjF.35.4020 322 LFLSGMR|DE 0.076 . LmjF.35.4020 332 VPPEQMR|TL 0.095 . LmjF.35.4020 336 QMRTLYK|AA 0.094 . LmjF.35.4020 340 LYKAATK|CL 0.074 . LmjF.35.4020 343 AATKCLR|DG 0.113 . LmjF.35.4020 355 ELTIPLR|RF 0.073 . LmjF.35.4020 356 LTIPLRR|FL 0.141 . LmjF.35.4020 364 LEFEDGR|HN 0.074 . LmjF.35.4020 386 DFVTDVR|NA 0.090 . ____________________________^_________________

  • Fasta :-

    >LmjF.35.4020 ATGAGCTTTGGCAGCTTTCTTCTCTCGGCTGGACTCTACTTGGTCCTCGTCGCCGTATTT GTGTCGCTTTTTCTGCACATCATGAGCTACCGCTACCGAAGTCAGCAGAACCAGCTTCTC TACTACCCACACATTCCTCCGGAGAGCCGAGAGGTCTGCGAAGACCCGGTGGCGCTCGGC ATCCCCTACGCAGAGCGCGTGTGCGTCACCACCGCTGATAAGGTGCGATTGTGGGGCTAC ATGCTATGGCCAGCGCCTGCGCCGTCCGCGGAGAAGAGCGGCAATGCAAGCGTTCCCGAC TCGATCGGGCGCGCATCCTCGAACGTGGCCACCGCAGAGGGAGGCATGCATGTAGAGGTG GATGCACCAGGTAGCGCTACAGACAGTACCAGCGCCAGCAACATGGTGTCTGGCAGCAGC AGAAGCGTTACCATGTCGAGCGGGATGCCGAGTTTTGTGATGCTGTACTTTCACGGAAAC GCCGGTAACGTTGGCCATCGCCTGCCTCTTGCTCAGGCCTTTGTGACCCACCTGAAGTGC GCGGTCATGATGGTTGACTATCGCGGTTTTGGCCTTAGCGATGACTCGGAGCAGACGCAG GAGACGTTGGAGCTGGATGCGCAGGCCTGCTTCGATTATCTGTGGCAGGATCCTCGTGTG CCGCGTGATCGTATCATTGTCATGGGCACTAGCCTCGGTGGCGCTGTTTCGATTCACTTG GCTGCCAACGAGCGGTACGGCCGTCGCATAGCTGCTGTGATTGTAGAAAACTCCTTCAGC TCCATTAGCGACATGGCCTCTGCGCTGAGCCGGCCAATCCTGACGAAGCTGGCGAGCCGG TGCCCAGACCTTGCGGTGGGTATCTTCGAGTACTACGTCAAGCCCCTGGCTCTGCGGATA AGTTGGAACAGCGCGCAGAAGATTACTAAGGTTGTGGTGCCGATGCTCTTTCTCTCTGGT ATGCGTGATGAGATTGTGCCACCGGAGCAGATGCGGACACTATACAAGGCCGCGACGAAG TGTCTGCGCGATGGCAACGGTGGCGAACTCACCATTCCGCTGCGTCGCTTTCTCGAGTTT GAGGACGGGCGCCACAACAACTTGCCGCTGATGCCCGGCTACATGAGCGCCCTGCAGGAC TTTGTCACGGACGTGCGCAACGCCGGAGCTGCTGCTGTCGTTTGA
  • Download Fasta

  • Fasta :-

    MSFGSFLLSAGLYLVLVAVFVSLFLHIMSYRYRSQQNQLLYYPHIPPESREVCEDPVALG IPYAERVCVTTADKVRLWGYMLWPAPAPSAEKSGNASVPDSIGRASSNVATAEGGMHVEV DAPGSATDSTSASNMVSGSSRSVTMSSGMPSFVMLYFHGNAGNVGHRLPLAQAFVTHLKC AVMMVDYRGFGLSDDSEQTQETLELDAQACFDYLWQDPRVPRDRIIVMGTSLGGAVSIHL AANERYGRRIAAVIVENSFSSISDMASALSRPILTKLASRCPDLAVGIFEYYVKPLALRI SWNSAQKITKVVVPMLFLSGMRDEIVPPEQMRTLYKAATKCLRDGNGGELTIPLRRFLEF EDGRHNNLPLMPGYMSALQDFVTDVRNAGAAAVV

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LmjF.35.402097 SSGNASVPDS0.993unsp

LmjF.35.4020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India