LmxM.02.0040 | Xaa-Pro aminopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.02.0040OTHER0.9869680.0010330.012000
No Results

  • Fasta :-

    >LmxM.02.0040 MKASGAAVLHAVREKMKEATVTALIVPSSDAHNSEYVATHLQSRAFVSHFHGSAGTALIT MEKALLWTDGRYWLAAEEEKYPEFELMKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATV AEWERLSKKINLCPVANIVQDMMPPETNVEKLYVRPAEFCGATCQERRAAILAEMEKKDC DLIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACED HIDFYPYEQFEADLKQLPQGRKALVDERQTSEAVFRILKDVGTKARRGVCGPAQKLKGVK NEVELKGFRDCHVRDGAALTRYLAWLHDQVVNRGATDLNEYDAATKLEEFRAQGEHFVQL SFGSISSIGPNGAMCHYCPPETGSATIRADQLYLIDSGAHYWDGTTDVTRTICFSAPSDE QREAYTLVLKGHIALNSIVFPKGTGGARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHE GPHGIGIRPVATEANMELHCIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMS HLTMAPLCRDLIDVSLLTETERAWVDRYHAKVVASTMPYLQKAGDQNAVEYLKYHAQPLC AVNEAHTVLSPDGKDAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/496 Sequence name : 496 Sequence length : 617 VALUES OF COMPUTED PARAMETERS Coef20 : 4.049 CoefTot : 0.331 ChDiff : -18 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.259 0.088 0.504 MesoH : -0.242 0.301 -0.316 0.279 MuHd_075 : 18.538 9.825 2.351 2.614 MuHd_095 : 37.548 21.650 11.129 6.178 MuHd_100 : 28.199 17.269 8.087 5.172 MuHd_105 : 13.744 11.570 4.234 3.343 Hmax_075 : -2.975 6.100 -3.673 1.085 Hmax_095 : 16.400 14.800 2.378 4.880 Hmax_100 : 7.000 11.700 -0.499 3.560 Hmax_105 : 3.033 8.633 -1.271 2.847 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8314 0.1686 DFMC : 0.7137 0.2863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 617 LmxM.02.0040 MKASGAAVLHAVREKMKEATVTALIVPSSDAHNSEYVATHLQSRAFVSHFHGSAGTALITMEKALLWTDGRYWLAAEEEK 80 YPEFELMKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATVAEWERLSKKINLCPVANIVQDMMPPETNVEKLYVRPAEFC 160 GATCQERRAAILAEMEKKDCDLIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACED 240 HIDFYPYEQFEADLKQLPQGRKALVDERQTSEAVFRILKDVGTKARRGVCGPAQKLKGVKNEVELKGFRDCHVRDGAALT 320 RYLAWLHDQVVNRGATDLNEYDAATKLEEFRAQGEHFVQLSFGSISSIGPNGAMCHYCPPETGSATIRADQLYLIDSGAH 400 YWDGTTDVTRTICFSAPSDEQREAYTLVLKGHIALNSIVFPKGTGGARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHE 480 GPHGIGIRPVATEANMELHCIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTET 560 ERAWVDRYHAKVVASTMPYLQKAGDQNAVEYLKYHAQPLCAVNEAHTVLSPDGKDAK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.02.0040 2 -----MK|AS 0.088 . LmxM.02.0040 13 AVLHAVR|EK 0.071 . LmxM.02.0040 15 LHAVREK|MK 0.077 . LmxM.02.0040 17 AVREKMK|EA 0.071 . LmxM.02.0040 44 ATHLQSR|AF 0.095 . LmxM.02.0040 63 ALITMEK|AL 0.057 . LmxM.02.0040 71 LLWTDGR|YW 0.105 . LmxM.02.0040 80 LAAEEEK|YP 0.068 . LmxM.02.0040 88 PEFELMK|QG 0.063 . LmxM.02.0040 91 ELMKQGK|PE 0.074 . LmxM.02.0040 108 AVNLGSK|AV 0.066 . LmxM.02.0040 125 TVAEWER|LS 0.083 . LmxM.02.0040 128 EWERLSK|KI 0.096 . LmxM.02.0040 129 WERLSKK|IN 0.082 . LmxM.02.0040 151 PETNVEK|LY 0.053 . LmxM.02.0040 155 VEKLYVR|PA 0.096 . LmxM.02.0040 167 GATCQER|RA 0.084 . LmxM.02.0040 168 ATCQERR|AA 0.170 . LmxM.02.0040 177 ILAEMEK|KD 0.060 . LmxM.02.0040 178 LAEMEKK|DC 0.132 . LmxM.02.0040 198 AWFTNLR|GG 0.076 . LmxM.02.0040 220 IDGHHEK|VR 0.061 . LmxM.02.0040 222 GHHEKVR|LY 0.084 . LmxM.02.0040 229 LYVNPDK|VT 0.074 . LmxM.02.0040 235 KVTGAVR|QA 0.086 . LmxM.02.0040 255 QFEADLK|QL 0.065 . LmxM.02.0040 261 KQLPQGR|KA 0.101 . LmxM.02.0040 262 QLPQGRK|AL 0.084 . LmxM.02.0040 268 KALVDER|QT 0.096 . LmxM.02.0040 276 TSEAVFR|IL 0.136 . LmxM.02.0040 279 AVFRILK|DV 0.251 . LmxM.02.0040 284 LKDVGTK|AR 0.057 . LmxM.02.0040 286 DVGTKAR|RG 0.087 . LmxM.02.0040 287 VGTKARR|GV 0.159 . LmxM.02.0040 295 VCGPAQK|LK 0.064 . LmxM.02.0040 297 GPAQKLK|GV 0.105 . LmxM.02.0040 300 QKLKGVK|NE 0.053 . LmxM.02.0040 306 KNEVELK|GF 0.065 . LmxM.02.0040 309 VELKGFR|DC 0.079 . LmxM.02.0040 314 FRDCHVR|DG 0.101 . LmxM.02.0040 321 DGAALTR|YL 0.096 . LmxM.02.0040 333 HDQVVNR|GA 0.172 . LmxM.02.0040 346 EYDAATK|LE 0.053 . LmxM.02.0040 351 TKLEEFR|AQ 0.118 . LmxM.02.0040 388 TGSATIR|AD 0.108 . LmxM.02.0040 410 GTTDVTR|TI 0.090 . LmxM.02.0040 422 APSDEQR|EA 0.134 . LmxM.02.0040 430 AYTLVLK|GH 0.056 . LmxM.02.0040 442 NSIVFPK|GT 0.105 . LmxM.02.0040 448 KGTGGAR|LD 0.076 . LmxM.02.0040 454 RLDTLAR|MA 0.099 . LmxM.02.0040 488 PHGIGIR|PV 0.124 . LmxM.02.0040 510 NEPGYYK|DG 0.070 . LmxM.02.0040 517 DGHYGIR|IE 0.082 . LmxM.02.0040 528 EEVVECR|TK 0.080 . LmxM.02.0040 530 VVECRTK|YS 0.072 . LmxM.02.0040 549 TMAPLCR|DL 0.130 . LmxM.02.0040 562 LLTETER|AW 0.080 . LmxM.02.0040 567 ERAWVDR|YH 0.164 . LmxM.02.0040 571 VDRYHAK|VV 0.087 . LmxM.02.0040 582 TMPYLQK|AG 0.066 . LmxM.02.0040 593 NAVEYLK|YH 0.061 . LmxM.02.0040 614 VLSPDGK|DA 0.095 . LmxM.02.0040 617 PDGKDAK|-- 0.070 . ____________________________^_________________

  • Fasta :-

    >LmxM.02.0040 ATGAAGGCTTCTGGCGCTGCCGTGCTGCACGCGGTGCGTGAGAAGATGAAGGAGGCCACC GTGACCGCACTCATCGTCCCTAGCAGCGACGCACACAACAGCGAGTATGTGGCGACGCAC CTGCAGAGCCGCGCATTCGTCTCTCACTTCCACGGCAGCGCCGGTACCGCCTTGATCACG ATGGAGAAGGCGCTCCTGTGGACGGACGGACGCTACTGGTTGGCCGCAGAGGAGGAGAAG TACCCCGAGTTTGAACTCATGAAGCAAGGCAAGCCAGAGGTCCCGTCGCTCGACGAGTGG ATTGCCGTCAATCTCGGCTCCAAAGCAGTTGTTGGCATGAGCCCGTACGTCGCCACCGTG GCGGAGTGGGAGCGGCTGAGCAAGAAGATCAATCTGTGTCCGGTGGCGAACATCGTCCAG GACATGATGCCGCCGGAGACGAACGTGGAAAAACTGTACGTGCGCCCCGCTGAGTTCTGC GGTGCCACCTGCCAGGAGCGGCGCGCCGCGATTCTCGCAGAGATGGAGAAGAAGGACTGC GACCTGATCATTCTGTCCGCGCTGGATGAGATCGCGTGGTTCACGAATCTGCGCGGCGGC GACGTGGACTACAACCCCGTCTTCTACGCGTACGCTGTCATTGACGGGCACCACGAAAAA GTGCGCCTCTACGTGAACCCAGACAAGGTCACAGGTGCAGTGCGCCAGGCGTGCGAGGAT CACATCGACTTCTACCCGTACGAGCAGTTCGAGGCGGATCTCAAGCAGCTACCACAGGGT CGCAAGGCCCTCGTCGACGAGCGCCAGACGAGCGAGGCCGTCTTTCGCATCTTGAAGGAT GTCGGCACCAAGGCCCGTCGAGGCGTTTGCGGCCCCGCGCAGAAGTTGAAGGGAGTCAAG AATGAGGTCGAGCTCAAAGGCTTCCGCGACTGCCACGTACGCGACGGTGCTGCACTGACG CGCTACCTCGCCTGGCTGCACGACCAGGTCGTGAACAGGGGTGCGACGGACCTGAACGAG TACGACGCGGCCACGAAGCTCGAGGAGTTCCGCGCGCAGGGGGAACACTTTGTGCAGCTC AGTTTTGGCTCCATCTCGTCCATCGGCCCTAACGGTGCAATGTGCCACTACTGCCCCCCC GAGACGGGCTCTGCCACCATTCGCGCGGACCAGCTGTACTTAATCGACAGTGGTGCGCAC TACTGGGACGGTACCACCGATGTGACGCGCACCATCTGCTTCTCAGCACCGAGTGATGAG CAGCGCGAGGCCTACACGCTTGTGCTCAAAGGGCACATCGCACTCAACAGTATCGTTTTT CCCAAGGGCACAGGCGGTGCCCGTCTCGACACTCTGGCGCGTATGGCGCTCTGGGGCGTG GGACTGGACTACGCCCACGGCACTGGGCATGGCGTGGGATCCTTCCTCAACGTGCACGAG GGCCCCCACGGAATCGGCATTCGCCCAGTTGCTACGGAGGCGAACATGGAGCTGCACTGC ATCGTGTCGAACGAGCCTGGCTACTACAAGGACGGGCACTACGGCATCCGCATTGAGAAC CTCGAAGAGGTGGTCGAGTGTCGGACCAAGTACAGCGCGACCGGCTTCTACACCATGTCG CACCTCACGATGGCGCCCCTGTGCCGCGACCTCATCGATGTGAGCCTCCTCACAGAGACG GAGCGCGCCTGGGTAGACCGATACCACGCCAAGGTGGTGGCAAGCACCATGCCGTACCTG CAAAAGGCGGGCGACCAGAACGCCGTCGAGTACCTCAAATACCATGCGCAACCTCTCTGT GCGGTGAATGAGGCGCACACCGTGCTCAGCCCAGACGGGAAAGATGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MKASGAAVLHAVREKMKEATVTALIVPSSDAHNSEYVATHLQSRAFVSHFHGSAGTALIT MEKALLWTDGRYWLAAEEEKYPEFELMKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATV AEWERLSKKINLCPVANIVQDMMPPETNVEKLYVRPAEFCGATCQERRAAILAEMEKKDC DLIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACED HIDFYPYEQFEADLKQLPQGRKALVDERQTSEAVFRILKDVGTKARRGVCGPAQKLKGVK NEVELKGFRDCHVRDGAALTRYLAWLHDQVVNRGATDLNEYDAATKLEEFRAQGEHFVQL SFGSISSIGPNGAMCHYCPPETGSATIRADQLYLIDSGAHYWDGTTDVTRTICFSAPSDE QREAYTLVLKGHIALNSIVFPKGTGGARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHE GPHGIGIRPVATEANMELHCIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMS HLTMAPLCRDLIDVSLLTETERAWVDRYHAKVVASTMPYLQKAGDQNAVEYLKYHAQPLC AVNEAHTVLSPDGKDAK

  • title: active site
  • coordinates: H376,D396,D407,S474,E505,E519
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India