LmxM.07.0270 | acetylornithine deacetylase-like protein

_IDPredictionOTHERSPmTPCS_Position
LmxM.07.0270OTHER0.9889520.0034280.007619
No Results

  • Fasta :-

    >LmxM.07.0270 MASLQHVRDMLAKLVGFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLAT LPSADGSVEGGLILSGHTDVVPVDGQKWASDPFVLTERDGNLYGRGSCDMKAFIAVCLAL VPEWVHAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLKKCEGCIVGEPTMLDLVVAHK GIFYSYITFKGKAAHSSLQTAGYNAIEPAMRVLQKLFEMRDRFARQGPFEEGFNITHTTL CPALTTGGNAMNTIPAECSLGFEFRNVPSHPASVIKEEVWDFIGAETERVKLACPEGGME VVKRGEVAPFGGNKDASVVKALLAANPERPMVTKVSFCTEAGEYQAAGINSVVCGPGNIE QAHKANEFVSLEQLDKGLLVMRRVVQLMCGGSEASQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/715 Sequence name : 715 Sequence length : 397 VALUES OF COMPUTED PARAMETERS Coef20 : 4.115 CoefTot : 0.116 ChDiff : -8 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.112 1.553 0.172 0.634 MesoH : -0.230 0.520 -0.265 0.275 MuHd_075 : 36.602 15.476 7.722 6.501 MuHd_095 : 18.951 17.781 7.277 4.395 MuHd_100 : 18.745 18.844 6.087 4.570 MuHd_105 : 22.852 20.310 6.019 5.014 Hmax_075 : 13.900 13.200 2.346 4.940 Hmax_095 : 6.600 15.500 0.750 4.580 Hmax_100 : 7.700 15.500 0.750 4.580 Hmax_105 : 18.700 19.500 3.034 6.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6877 0.3123 DFMC : 0.8333 0.1667
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 397 LmxM.07.0270 MASLQHVRDMLAKLVGFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLATLPSADGSVEGGLILSGHTDV 80 VPVDGQKWASDPFVLTERDGNLYGRGSCDMKAFIAVCLALVPEWVHAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLK 160 KCEGCIVGEPTMLDLVVAHKGIFYSYITFKGKAAHSSLQTAGYNAIEPAMRVLQKLFEMRDRFARQGPFEEGFNITHTTL 240 CPALTTGGNAMNTIPAECSLGFEFRNVPSHPASVIKEEVWDFIGAETERVKLACPEGGMEVVKRGEVAPFGGNKDASVVK 320 ALLAANPERPMVTKVSFCTEAGEYQAAGINSVVCGPGNIEQAHKANEFVSLEQLDKGLLVMRRVVQLMCGGSEASQL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.07.0270 8 ASLQHVR|DM 0.117 . LmxM.07.0270 13 VRDMLAK|LV 0.094 . LmxM.07.0270 23 FETVSAR|TN 0.082 . LmxM.07.0270 42 LAACGVK|HV 0.081 . LmxM.07.0270 48 KHVTVMR|SA 0.225 . LmxM.07.0270 87 VPVDGQK|WA 0.068 . LmxM.07.0270 98 PFVLTER|DG 0.082 . LmxM.07.0270 105 DGNLYGR|GS 0.100 . LmxM.07.0270 111 RGSCDMK|AF 0.074 . LmxM.07.0270 130 WVHAPPR|KP 0.089 . LmxM.07.0270 131 VHAPPRK|PV 0.140 . LmxM.07.0270 149 TTFDGVR|QL 0.089 . LmxM.07.0270 153 GVRQLMR|ER 0.091 . LmxM.07.0270 155 RQLMRER|GS 0.079 . LmxM.07.0270 160 ERGSDLK|KC 0.066 . LmxM.07.0270 161 RGSDLKK|CE 0.156 . LmxM.07.0270 180 DLVVAHK|GI 0.071 . LmxM.07.0270 190 YSYITFK|GK 0.066 . LmxM.07.0270 192 YITFKGK|AA 0.085 . LmxM.07.0270 211 AIEPAMR|VL 0.086 . LmxM.07.0270 215 AMRVLQK|LF 0.069 . LmxM.07.0270 220 QKLFEMR|DR 0.105 . LmxM.07.0270 222 LFEMRDR|FA 0.150 . LmxM.07.0270 225 MRDRFAR|QG 0.316 . LmxM.07.0270 265 SLGFEFR|NV 0.143 . LmxM.07.0270 276 HPASVIK|EE 0.068 . LmxM.07.0270 289 IGAETER|VK 0.076 . LmxM.07.0270 291 AETERVK|LA 0.071 . LmxM.07.0270 303 GGMEVVK|RG 0.071 . LmxM.07.0270 304 GMEVVKR|GE 0.221 . LmxM.07.0270 314 APFGGNK|DA 0.087 . LmxM.07.0270 320 KDASVVK|AL 0.071 . LmxM.07.0270 329 LAANPER|PM 0.088 . LmxM.07.0270 334 ERPMVTK|VS 0.071 . LmxM.07.0270 364 NIEQAHK|AN 0.063 . LmxM.07.0270 376 SLEQLDK|GL 0.067 . LmxM.07.0270 382 KGLLVMR|RV 0.095 . LmxM.07.0270 383 GLLVMRR|VV 0.134 . ____________________________^_________________

  • Fasta :-

    >LmxM.07.0270 ATGGCCTCCCTTCAACATGTGCGTGATATGCTGGCGAAGCTGGTTGGCTTCGAAACGGTA AGTGCGCGCACGAACCTGCCGCTGATCGAGTACGTGCAAGGGTACCTTGCGGCGTGCGGC GTGAAGCACGTGACGGTGATGCGGTCGGCGGACGGGATCCACGCAAACCTGTTGGCGACG CTGCCAAGCGCGGATGGCAGCGTGGAAGGCGGGCTGATCCTGAGCGGGCATACCGATGTT GTGCCAGTGGACGGGCAGAAGTGGGCAAGTGACCCGTTCGTGCTGACGGAGCGCGATGGC AACCTTTACGGGCGCGGGTCGTGCGACATGAAGGCGTTCATTGCGGTGTGCCTTGCACTT GTGCCGGAGTGGGTGCATGCGCCGCCGCGGAAGCCTGTGCAAATTGCGCTGACGTACGAC GAGGAGACGACGTTCGACGGCGTGCGACAGCTGATGCGCGAGCGGGGAAGCGATCTGAAG AAGTGCGAGGGCTGCATCGTTGGCGAGCCGACAATGCTGGACCTCGTAGTTGCGCACAAG GGCATCTTCTACAGCTACATCACCTTCAAAGGCAAGGCTGCGCACTCTTCGCTGCAGACC GCCGGGTACAACGCCATCGAGCCTGCGATGCGCGTGTTGCAGAAGCTTTTCGAGATGCGT GATCGCTTCGCCCGCCAGGGCCCCTTCGAGGAGGGCTTCAACATCACCCACACGACCCTC TGTCCGGCTCTCACGACCGGCGGCAACGCCATGAATACCATCCCTGCAGAGTGCTCGCTG GGCTTCGAGTTCCGCAACGTGCCATCTCACCCTGCATCTGTTATTAAGGAGGAGGTCTGG GACTTCATCGGCGCGGAGACGGAGCGCGTGAAGCTGGCGTGCCCGGAGGGAGGCATGGAG GTGGTGAAGCGCGGCGAAGTCGCGCCCTTTGGCGGGAATAAGGATGCGTCGGTCGTGAAG GCCCTCCTGGCTGCCAACCCTGAGCGTCCGATGGTGACGAAGGTATCTTTCTGCACAGAG GCGGGCGAGTACCAGGCCGCTGGCATCAACTCCGTTGTGTGCGGCCCCGGCAACATTGAA CAGGCACACAAGGCGAACGAGTTTGTGTCGCTGGAGCAGCTGGACAAGGGCCTGTTGGTC ATGCGGCGCGTGGTGCAGCTGATGTGCGGCGGGAGCGAGGCGAGCCAGCTGTGA
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  • Fasta :-

    MASLQHVRDMLAKLVGFETVSARTNLPLIEYVQGYLAACGVKHVTVMRSADGIHANLLAT LPSADGSVEGGLILSGHTDVVPVDGQKWASDPFVLTERDGNLYGRGSCDMKAFIAVCLAL VPEWVHAPPRKPVQIALTYDEETTFDGVRQLMRERGSDLKKCEGCIVGEPTMLDLVVAHK GIFYSYITFKGKAAHSSLQTAGYNAIEPAMRVLQKLFEMRDRFARQGPFEEGFNITHTTL CPALTTGGNAMNTIPAECSLGFEFRNVPSHPASVIKEEVWDFIGAETERVKLACPEGGME VVKRGEVAPFGGNKDASVVKALLAANPERPMVTKVSFCTEAGEYQAAGINSVVCGPGNIE QAHKANEFVSLEQLDKGLLVMRRVVQLMCGGSEASQL

  • title: metal binding site
  • coordinates: H77,D109,E141,E142,E169,H363
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India