LmxM.08.0450 | signal peptidase type I, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.08.0450OTHER0.9146710.0815300.003799
No Results

  • Fasta :-

    >LmxM.08.0450 MREHIDTLLSLRIRDVVHQVVTISLFLSVILVGWRGAAVITNCEASIVVVLSGSMEPGYH RGDVLLLHHRPEYPVEVGDIIVYTLPGQEIPIVHRVHRIHERAEDHKRLYLTKGDNNMND DRFLFHGGREWVEQDMIIGKTFAYVPRIGYLTIMFNESKVIKYVALALLGFFMLTSTQDL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/574 Sequence name : 574 Sequence length : 180 VALUES OF COMPUTED PARAMETERS Coef20 : 4.233 CoefTot : 0.135 ChDiff : -3 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 2.318 0.249 0.720 MesoH : -0.100 0.819 -0.195 0.352 MuHd_075 : 8.993 0.812 1.886 1.732 MuHd_095 : 30.947 26.622 9.279 6.998 MuHd_100 : 13.504 17.953 5.824 3.618 MuHd_105 : 9.644 5.546 2.345 0.581 Hmax_075 : -2.900 6.400 -3.494 3.160 Hmax_095 : 7.087 19.600 1.765 4.672 Hmax_100 : -5.000 13.200 -1.045 2.700 Hmax_105 : -5.700 8.900 -1.828 2.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9590 0.0410 DFMC : 0.9833 0.0167
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 180 LmxM.08.0450 MREHIDTLLSLRIRDVVHQVVTISLFLSVILVGWRGAAVITNCEASIVVVLSGSMEPGYHRGDVLLLHHRPEYPVEVGDI 80 IVYTLPGQEIPIVHRVHRIHERAEDHKRLYLTKGDNNMNDDRFLFHGGREWVEQDMIIGKTFAYVPRIGYLTIMFNESKV 160 IKYVALALLGFFMLTSTQDL 240 ................................................................................ 80 ................................................................................ 160 .................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.08.0450 2 -----MR|EH 0.093 . LmxM.08.0450 12 DTLLSLR|IR 0.069 . LmxM.08.0450 14 LLSLRIR|DV 0.220 . LmxM.08.0450 35 VILVGWR|GA 0.088 . LmxM.08.0450 61 MEPGYHR|GD 0.077 . LmxM.08.0450 70 VLLLHHR|PE 0.083 . LmxM.08.0450 95 EIPIVHR|VH 0.081 . LmxM.08.0450 98 IVHRVHR|IH 0.444 . LmxM.08.0450 102 VHRIHER|AE 0.111 . LmxM.08.0450 107 ERAEDHK|RL 0.063 . LmxM.08.0450 108 RAEDHKR|LY 0.188 . LmxM.08.0450 113 KRLYLTK|GD 0.069 . LmxM.08.0450 122 NNMNDDR|FL 0.131 . LmxM.08.0450 129 FLFHGGR|EW 0.080 . LmxM.08.0450 140 QDMIIGK|TF 0.063 . LmxM.08.0450 147 TFAYVPR|IG 0.088 . LmxM.08.0450 159 IMFNESK|VI 0.059 . LmxM.08.0450 162 NESKVIK|YV 0.106 . ____________________________^_________________

  • Fasta :-

    >LmxM.08.0450 ATGCGCGAACACATTGACACGCTGCTGTCACTGCGCATCCGCGATGTCGTTCACCAAGTC GTTACTATTAGCCTCTTCCTGAGCGTCATCCTCGTTGGCTGGCGCGGCGCGGCGGTGATC ACCAACTGCGAGGCCAGCATCGTCGTGGTGCTGAGCGGAAGTATGGAGCCTGGTTACCAT CGCGGCGACGTGCTCCTGCTGCACCATCGCCCCGAGTACCCGGTGGAGGTTGGCGACATC ATCGTCTACACGCTGCCGGGGCAGGAAATACCGATTGTACACCGCGTCCACCGCATCCAT GAGCGTGCCGAGGATCATAAAAGACTATACCTGACGAAGGGCGACAACAACATGAACGAC GACCGCTTTCTCTTCCATGGCGGGCGGGAGTGGGTTGAGCAGGACATGATTATCGGCAAG ACGTTCGCCTACGTGCCGCGTATCGGGTACCTGACCATCATGTTTAACGAGTCAAAGGTT ATCAAGTACGTTGCGCTGGCTCTCTTGGGTTTCTTTATGCTGACCTCCACACAGGATCTG TAG
  • Download Fasta

  • Fasta :-

    MREHIDTLLSLRIRDVVHQVVTISLFLSVILVGWRGAAVITNCEASIVVVLSGSMEPGYH RGDVLLLHHRPEYPVEVGDIIVYTLPGQEIPIVHRVHRIHERAEDHKRLYLTKGDNNMND DRFLFHGGREWVEQDMIIGKTFAYVPRIGYLTIMFNESKVIKYVALALLGFFMLTSTQDL

  • title: Catalytic site
  • coordinates: S54,H94
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India