LmxM.13.0090 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LmxM.13.0090OTHER0.9951490.0008600.003990
No Results

  • Fasta :-

    >LmxM.13.0090 MQAYSQLEKLCQKVYRLEHLLSLGAWDAKTMMPSKGAAARGAALGELYGLIAEMITSPST KTLLDEAETAKAELTTVQQANLRELRRMYTSQAALPTEFSVLKAKLSSTTPLIWAKCRSN NDFVTFLPALKEMIALARREAQYRSTATGKPLYEALFNQYESGMTLETLEKNLLDVKSWL PELLQKILAAQKDAGREAVAPEAPFPKDKQEALSRHLMKVWGFDFESGRLDVSEHPFMGM VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLVPLLKEYLGDQPTLSLENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWPMGAFGYFPT YSLGSMFAVQLMATIKKELGEDTVDKCIRTGQMEPIFQKQREKIWSQGCLYNTEDLIVKA TGETLNPKHFREYLERRYLRQED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/886 Sequence name : 886 Sequence length : 503 VALUES OF COMPUTED PARAMETERS Coef20 : 3.633 CoefTot : -0.092 ChDiff : -9 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.729 0.131 0.660 MesoH : -0.783 0.284 -0.465 0.175 MuHd_075 : 21.469 8.115 7.013 2.261 MuHd_095 : 26.490 20.143 9.780 7.268 MuHd_100 : 32.834 26.515 11.433 9.139 MuHd_105 : 37.578 30.715 12.437 9.962 Hmax_075 : 5.367 5.017 0.287 2.415 Hmax_095 : 2.900 11.300 1.212 3.730 Hmax_100 : 6.400 16.400 2.221 4.570 Hmax_105 : 13.900 18.783 4.277 6.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9053 0.0947 DFMC : 0.8913 0.1087
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 503 LmxM.13.0090 MQAYSQLEKLCQKVYRLEHLLSLGAWDAKTMMPSKGAAARGAALGELYGLIAEMITSPSTKTLLDEAETAKAELTTVQQA 80 NLRELRRMYTSQAALPTEFSVLKAKLSSTTPLIWAKCRSNNDFVTFLPALKEMIALARREAQYRSTATGKPLYEALFNQY 160 ESGMTLETLEKNLLDVKSWLPELLQKILAAQKDAGREAVAPEAPFPKDKQEALSRHLMKVWGFDFESGRLDVSEHPFMGM 240 VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSRFAEVVIGHSSAFLEFLVPLL 320 KEYLGDQPTLSLENVRLMNQTVKPGFIRIRADEVCYPLHILLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRD 400 EIGCLQDIHWPMGAFGYFPTYSLGSMFAVQLMATIKKELGEDTVDKCIRTGQMEPIFQKQREKIWSQGCLYNTEDLIVKA 480 TGETLNPKHFREYLERRYLRQED 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.13.0090 9 AYSQLEK|LC 0.066 . LmxM.13.0090 13 LEKLCQK|VY 0.054 . LmxM.13.0090 16 LCQKVYR|LE 0.085 . LmxM.13.0090 29 LGAWDAK|TM 0.070 . LmxM.13.0090 35 KTMMPSK|GA 0.074 . LmxM.13.0090 40 SKGAAAR|GA 0.165 . LmxM.13.0090 61 ITSPSTK|TL 0.079 . LmxM.13.0090 71 DEAETAK|AE 0.062 . LmxM.13.0090 83 VQQANLR|EL 0.083 . LmxM.13.0090 86 ANLRELR|RM 0.185 . LmxM.13.0090 87 NLRELRR|MY 0.134 . LmxM.13.0090 103 TEFSVLK|AK 0.059 . LmxM.13.0090 105 FSVLKAK|LS 0.071 . LmxM.13.0090 116 TPLIWAK|CR 0.067 . LmxM.13.0090 118 LIWAKCR|SN 0.147 . LmxM.13.0090 131 TFLPALK|EM 0.053 . LmxM.13.0090 138 EMIALAR|RE 0.085 . LmxM.13.0090 139 MIALARR|EA 0.115 . LmxM.13.0090 144 RREAQYR|ST 0.200 . LmxM.13.0090 150 RSTATGK|PL 0.076 . LmxM.13.0090 171 TLETLEK|NL 0.063 . LmxM.13.0090 177 KNLLDVK|SW 0.071 . LmxM.13.0090 186 LPELLQK|IL 0.066 . LmxM.13.0090 192 KILAAQK|DA 0.077 . LmxM.13.0090 196 AQKDAGR|EA 0.085 . LmxM.13.0090 207 PEAPFPK|DK 0.085 . LmxM.13.0090 209 APFPKDK|QE 0.068 . LmxM.13.0090 215 KQEALSR|HL 0.097 . LmxM.13.0090 219 LSRHLMK|VW 0.092 . LmxM.13.0090 229 FDFESGR|LD 0.074 . LmxM.13.0090 242 PFMGMVK|ED 0.066 . LmxM.13.0090 246 MVKEDSR|IT 0.082 . LmxM.13.0090 258 DLQDFTK|GL 0.085 . LmxM.13.0090 271 HETGHSK|YE 0.071 . LmxM.13.0090 282 CGPMEMR|GQ 0.084 . LmxM.13.0090 290 QPVCEAR|SM 0.223 . LmxM.13.0090 300 IHESQSR|FA 0.145 . LmxM.13.0090 321 FLVPLLK|EY 0.056 . LmxM.13.0090 336 LSLENVR|LM 0.073 . LmxM.13.0090 343 LMNQTVK|PG 0.064 . LmxM.13.0090 348 VKPGFIR|IR 0.079 . LmxM.13.0090 350 PGFIRIR|AD 0.095 . LmxM.13.0090 363 PLHILLR|YE 0.076 . LmxM.13.0090 368 LRYEIER|AL 0.113 . LmxM.13.0090 382 EAEDIPR|VW 0.084 . LmxM.13.0090 387 PRVWNEK|MK 0.062 . LmxM.13.0090 389 VWNEKMK|AY 0.078 . LmxM.13.0090 399 GLETEGR|DE 0.108 . LmxM.13.0090 436 QLMATIK|KE 0.058 . LmxM.13.0090 437 LMATIKK|EL 0.114 . LmxM.13.0090 446 GEDTVDK|CI 0.081 . LmxM.13.0090 449 TVDKCIR|TG 0.075 . LmxM.13.0090 459 MEPIFQK|QR 0.068 . LmxM.13.0090 461 PIFQKQR|EK 0.092 . LmxM.13.0090 463 FQKQREK|IW 0.070 . LmxM.13.0090 479 TEDLIVK|AT 0.068 . LmxM.13.0090 488 GETLNPK|HF 0.062 . LmxM.13.0090 491 LNPKHFR|EY 0.087 . LmxM.13.0090 496 FREYLER|RY 0.094 . LmxM.13.0090 497 REYLERR|YL 0.177 . LmxM.13.0090 500 LERRYLR|QE 0.266 . ____________________________^_________________

  • Fasta :-

    >LmxM.13.0090 ATGCAGGCCTACTCACAACTGGAGAAGCTTTGTCAGAAGGTGTACAGATTGGAACACCTT CTGTCTCTCGGCGCTTGGGATGCCAAGACCATGATGCCCTCAAAGGGCGCTGCTGCTCGC GGCGCCGCCTTGGGTGAGCTCTACGGACTCATCGCTGAGATGATCACCAGCCCGAGCACG AAGACGCTGCTGGACGAAGCTGAGACGGCCAAGGCCGAGCTCACTACCGTCCAGCAGGCG AACTTGCGCGAGCTCCGTCGCATGTACACCTCTCAAGCAGCGCTGCCGACCGAGTTCAGT GTGCTCAAGGCAAAGCTTTCGTCAACGACTCCGCTTATCTGGGCTAAATGCCGCAGCAAC AACGACTTTGTGACTTTCCTGCCGGCGCTGAAGGAGATGATTGCGCTTGCGCGCAGGGAG GCGCAGTATCGCTCCACTGCGACGGGCAAGCCTCTGTACGAGGCCCTCTTCAACCAGTAC GAGAGCGGGATGACGCTGGAGACACTGGAAAAAAATTTGCTCGACGTGAAGTCGTGGCTG CCAGAGCTGCTGCAGAAGATCCTGGCTGCACAGAAGGACGCGGGGCGGGAGGCGGTTGCG CCTGAGGCGCCCTTTCCCAAGGATAAGCAGGAGGCTCTTAGCCGCCATCTCATGAAGGTG TGGGGCTTCGACTTCGAGTCAGGTCGGCTGGACGTCTCCGAGCACCCGTTTATGGGCATG GTAAAGGAAGACTCGCGCATCACTACCGCCTACGACCTGCAGGACTTCACCAAGGGGCTC TTCGCGACGATCCACGAGACGGGCCACTCCAAGTACGAGACGAACTGCGGCCCGATGGAG ATGCGCGGCCAGCCGGTGTGCGAGGCACGCTCGATGACGATCCACGAGAGCCAGTCGCGC TTTGCCGAGGTTGTGATTGGCCACTCCAGCGCCTTCTTGGAGTTCCTGGTTCCATTGCTG AAGGAATACCTCGGTGATCAGCCCACGCTCTCTCTGGAGAACGTGCGGCTGATGAACCAG ACGGTGAAGCCTGGCTTCATCCGGATCCGGGCGGACGAGGTGTGCTACCCGCTGCACATC TTGCTGCGCTACGAGATAGAGCGTGCACTAATCGAGGGCACGATGGAGGCGGAGGACATC CCTCGCGTGTGGAACGAGAAGATGAAGGCATACCTGGGCCTGGAGACGGAGGGCCGTGAC GAGATTGGCTGCCTGCAGGACATTCATTGGCCGATGGGCGCGTTTGGCTACTTCCCGACG TACTCGCTTGGCTCCATGTTCGCGGTGCAGCTGATGGCGACGATCAAGAAGGAGCTTGGT GAGGACACAGTGGACAAGTGCATCCGCACTGGTCAGATGGAGCCGATCTTTCAGAAGCAG AGGGAGAAGATCTGGAGTCAGGGATGTCTCTACAACACAGAGGACCTGATTGTCAAGGCG ACCGGCGAAACACTGAACCCCAAGCACTTTCGCGAGTACCTGGAGCGCCGCTACCTGCGC CAGGAGGACTGA
  • Download Fasta

  • Fasta :-

    MQAYSQLEKLCQKVYRLEHLLSLGAWDAKTMMPSKGAAARGAALGELYGLIAEMITSPST KTLLDEAETAKAELTTVQQANLRELRRMYTSQAALPTEFSVLKAKLSSTTPLIWAKCRSN NDFVTFLPALKEMIALARREAQYRSTATGKPLYEALFNQYESGMTLETLEKNLLDVKSWL PELLQKILAAQKDAGREAVAPEAPFPKDKQEALSRHLMKVWGFDFESGRLDVSEHPFMGM VKEDSRITTAYDLQDFTKGLFATIHETGHSKYETNCGPMEMRGQPVCEARSMTIHESQSR FAEVVIGHSSAFLEFLVPLLKEYLGDQPTLSLENVRLMNQTVKPGFIRIRADEVCYPLHI LLRYEIERALIEGTMEAEDIPRVWNEKMKAYLGLETEGRDEIGCLQDIHWPMGAFGYFPT YSLGSMFAVQLMATIKKELGEDTVDKCIRTGQMEPIFQKQREKIWSQGCLYNTEDLIVKA TGETLNPKHFREYLERRYLRQED

  • title: metal binding site
  • coordinates: H265,H269,E296
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India