LmxM.14.0180 | metallo-peptidase, Clan MA(E), Family M32

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004181      

  • Computed_GO_Functions:  metallocarboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.14.0180OTHER0.9984280.0000970.001475
No Results

  • Fasta :-

    >LmxM.14.0180 MQTMMPPKAATARANALAELEVHVHQLRTAPRVALLLKEALRVKDELAEVDRANLREMVR LHELASQLPEELLRRKTRLATLAQQLWVKCRAENGIAAWLPTLQELVDLKREEGRL*AGT SGKSPYDALLGANEPGMTVAKLDAIYADIKSWLPALYKEVLENRKDVDASLTELQTPIAE EKQVALGRQLMTDVWKYDWGAGRYDESPHPFGEMVKEDVRMAYYWSPDNYTKCLLVTIHE TGHAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERIAKSAAFAEYLTPLLELHLGAQ PGLTVESVRKINQLVKPSYIRALSDEVGYSLHVILRYEIERDLIEGRLEAVDVPRVWNDK MKEYMGLETLGRDDLGCLQDIHWAAGFWAGFPAYTIGAIGAAQLMATIRQQLGDDVVTQC IRTGHIDPILAKQKQMIWDMGCLLEMDELLIKATGEPLNPRHLREHLERRYLRHED
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/104 Sequence name : 104 Sequence length : 476 VALUES OF COMPUTED PARAMETERS Coef20 : 4.202 CoefTot : 0.195 ChDiff : -12 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.153 0.175 0.688 MesoH : -0.347 0.378 -0.320 0.266 MuHd_075 : 17.515 7.208 3.426 3.139 MuHd_095 : 3.598 6.069 1.417 0.462 MuHd_100 : 9.118 0.972 2.720 1.456 MuHd_105 : 12.340 6.373 3.627 2.371 Hmax_075 : 15.400 12.833 1.563 4.387 Hmax_095 : 6.200 7.200 -1.203 2.280 Hmax_100 : 10.400 6.200 0.807 3.150 Hmax_105 : 13.800 8.900 1.026 3.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7040 0.2960 DFMC : 0.4307 0.5693 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.0556 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 476 LmxM.14.0180 MQTMMPPKAATARANALAELEVHVHQLRTAPRVALLLKEALRVKDELAEVDRANLREMVRLHELASQLPEELLRRKTRLA 80 TLAQQLWVKCRAENGIAAWLPTLQELVDLKREEGRLXAGTSGKSPYDALLGANEPGMTVAKLDAIYADIKSWLPALYKEV 160 LENRKDVDASLTELQTPIAEEKQVALGRQLMTDVWKYDWGAGRYDESPHPFGEMVKEDVRMAYYWSPDNYTKCLLVTIHE 240 TGHAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERIAKSAAFAEYLTPLLELHLGAQPGLTVESVRKINQLVKPSYI 320 RALSDEVGYSLHVILRYEIERDLIEGRLEAVDVPRVWNDKMKEYMGLETLGRDDLGCLQDIHWAAGFWAGFPAYTIGAIG 400 AAQLMATIRQQLGDDVVTQCIRTGHIDPILAKQKQMIWDMGCLLEMDELLIKATGEPLNPRHLREHLERRYLRHED 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.14.0180 8 QTMMPPK|AA 0.076 . LmxM.14.0180 13 PKAATAR|AN 0.114 . LmxM.14.0180 28 VHVHQLR|TA 0.080 . LmxM.14.0180 32 QLRTAPR|VA 0.085 . LmxM.14.0180 38 RVALLLK|EA 0.064 . LmxM.14.0180 42 LLKEALR|VK 0.069 . LmxM.14.0180 44 KEALRVK|DE 0.064 . LmxM.14.0180 52 ELAEVDR|AN 0.082 . LmxM.14.0180 56 VDRANLR|EM 0.067 . LmxM.14.0180 60 NLREMVR|LH 0.071 . LmxM.14.0180 74 LPEELLR|RK 0.068 . LmxM.14.0180 75 PEELLRR|KT 0.096 . LmxM.14.0180 76 EELLRRK|TR 0.065 . LmxM.14.0180 78 LLRRKTR|LA 0.374 . LmxM.14.0180 89 AQQLWVK|CR 0.059 . LmxM.14.0180 91 QLWVKCR|AE 0.112 . LmxM.14.0180 110 QELVDLK|RE 0.058 . LmxM.14.0180 111 ELVDLKR|EE 0.136 . LmxM.14.0180 115 LKREEGR|LX 0.085 . LmxM.14.0180 123 XAGTSGK|SP 0.098 . LmxM.14.0180 141 PGMTVAK|LD 0.060 . LmxM.14.0180 150 AIYADIK|SW 0.075 . LmxM.14.0180 158 WLPALYK|EV 0.067 . LmxM.14.0180 164 KEVLENR|KD 0.075 . LmxM.14.0180 165 EVLENRK|DV 0.136 . LmxM.14.0180 182 TPIAEEK|QV 0.085 . LmxM.14.0180 188 KQVALGR|QL 0.093 . LmxM.14.0180 196 LMTDVWK|YD 0.070 . LmxM.14.0180 203 YDWGAGR|YD 0.086 . LmxM.14.0180 216 PFGEMVK|ED 0.053 . LmxM.14.0180 220 MVKEDVR|MA 0.077 . LmxM.14.0180 232 SPDNYTK|CL 0.065 . LmxM.14.0180 245 HETGHAK|YE 0.068 . LmxM.14.0180 253 EQNCGPR|EL 0.092 . LmxM.14.0180 264 QPVCEAR|SG 0.233 . LmxM.14.0180 278 QSLLAER|IA 0.089 . LmxM.14.0180 281 LAERIAK|SA 0.253 . LmxM.14.0180 309 LTVESVR|KI 0.092 . LmxM.14.0180 310 TVESVRK|IN 0.082 . LmxM.14.0180 316 KINQLVK|PS 0.060 . LmxM.14.0180 321 VKPSYIR|AL 0.100 . LmxM.14.0180 336 SLHVILR|YE 0.086 . LmxM.14.0180 341 LRYEIER|DL 0.126 . LmxM.14.0180 347 RDLIEGR|LE 0.070 . LmxM.14.0180 355 EAVDVPR|VW 0.100 . LmxM.14.0180 360 PRVWNDK|MK 0.069 . LmxM.14.0180 362 VWNDKMK|EY 0.084 . LmxM.14.0180 372 GLETLGR|DD 0.105 . LmxM.14.0180 409 QLMATIR|QQ 0.077 . LmxM.14.0180 422 VVTQCIR|TG 0.064 . LmxM.14.0180 432 IDPILAK|QK 0.068 . LmxM.14.0180 434 PILAKQK|QM 0.063 . LmxM.14.0180 452 MDELLIK|AT 0.064 . LmxM.14.0180 461 GEPLNPR|HL 0.090 . LmxM.14.0180 464 LNPRHLR|EH 0.176 . LmxM.14.0180 469 LREHLER|RY 0.106 . LmxM.14.0180 470 REHLERR|YL 0.193 . LmxM.14.0180 473 LERRYLR|HE 0.283 . ____________________________^_________________

  • Fasta :-

    >LmxM.14.0180 ATGCAAACCATGATGCCGCCGAAGGCCGCGACGGCCCGCGCGAACGCGCTTGCGGAGCTG GAGGTGCACGTGCACCAGCTTCGCACAGCGCCGCGCGTTGCGCTCCTGTTGAAGGAGGCG CTGCGTGTTAAGGATGAACTCGCCGAGGTGGACCGCGCGAACCTCCGCGAAATGGTGCGC CTGCACGAGCTTGCGTCGCAGCTGCCGGAGGAGCTGCTGCGGCGCAAGACGCGGCTGGCA ACGCTGGCGCAGCAGCTGTGGGTGAAATGCCGCGCGGAAAACGGCATCGCTGCGTGGCTG CCGACGCTGCAGGAGCTGGTGGACCTCAAGCGCGAGGAGGGCCGCCTTTGAGCCGGCACG AGCGGGAAGTCCCCGTACGACGCGCTGCTCGGCGCCAACGAGCCCGGGATGACGGTTGCG AAGCTAGACGCAATCTACGCGGATATCAAGTCGTGGCTGCCGGCACTGTACAAGGAGGTG CTGGAGAACCGAAAGGACGTGGACGCGAGCCTCACTGAGCTGCAGACGCCGATCGCGGAG GAGAAGCAGGTTGCGCTTGGCCGGCAGCTGATGACGGACGTGTGGAAGTACGACTGGGGC GCGGGCCGCTACGACGAGTCGCCGCACCCATTTGGTGAGATGGTGAAGGAGGACGTGCGG ATGGCGTACTACTGGTCGCCGGACAACTACACCAAGTGCCTGCTGGTGACAATCCACGAG ACAGGCCACGCCAAGTACGAGCAGAACTGCGGGCCGCGCGAGCTGCTTGGGCAGCCGGTG TGCGAGGCGCGATCCGGCGGCATCCACGAGACGCAGTCACTGCTGGCCGAGAGGATAGCC AAGTCCGCTGCGTTCGCCGAGTACCTGACACCGCTGCTGGAGCTGCACCTTGGCGCGCAA CCAGGGCTGACTGTGGAGAGCGTGCGCAAGATCAACCAGCTGGTGAAGCCGAGCTACATC CGAGCCCTTTCGGACGAGGTGGGTTACTCTCTCCACGTGATCCTGCGCTACGAGATCGAG CGCGACCTGATCGAGGGGCGCCTGGAGGCGGTGGACGTTCCGCGGGTGTGGAACGACAAG ATGAAGGAGTACATGGGCCTGGAGACGCTTGGGCGCGACGACCTCGGGTGCCTACAGGAC ATCCACTGGGCTGCCGGCTTCTGGGCGGGCTTTCCCGCCTACACGATCGGCGCCATCGGC GCTGCGCAGCTCATGGCGACCATCCGCCAGCAGTTGGGTGACGACGTCGTGACGCAGTGC ATCCGCACGGGCCACATCGACCCCATCTTGGCCAAGCAGAAGCAGATGATCTGGGACATG GGCTGCCTCCTCGAAATGGACGAGCTGCTTATCAAAGCAACCGGCGAGCCGCTGAATCCG CGCCACCTGCGCGAGCACCTGGAGCGCCGCTACCTGCGCCATGAGGACTGA
  • Download Fasta

  • Fasta :-

    MQTMMPPKAATARANALAELEVHVHQLRTAPRVALLLKEALRVKDELAEVDRANLREMVR LHELASQLPEELLRRKTRLATLAQQLWVKCRAENGIAAWLPTLQELVDLKREEGRL*AGT SGKSPYDALLGANEPGMTVAKLDAIYADIKSWLPALYKEVLENRKDVDASLTELQTPIAE EKQVALGRQLMTDVWKYDWGAGRYDESPHPFGEMVKEDVRMAYYWSPDNYTKCLLVTIHE TGHAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERIAKSAAFAEYLTPLLELHLGAQ PGLTVESVRKINQLVKPSYIRALSDEVGYSLHVILRYEIERDLIEGRLEAVDVPRVWNDK MKEYMGLETLGRDDLGCLQDIHWAAGFWAGFPAYTIGAIGAAQLMATIRQQLGDDVVTQC IRTGHIDPILAKQKQMIWDMGCLLEMDELLIKATGEPLNPRHLREHLERRYLRHED

  • title: metal binding site
  • coordinates: H239,H243,E270
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.14.0180124 STSGKSPYDA0.998unspLmxM.14.0180324 SIRALSDEVG0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India