LmxM.17.0140 | peptidase t, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.17.0140OTHER0.9900420.0004150.009543
No Results

  • Fasta :-

    >LmxM.17.0140 MSLMPIEHRLEERFRRYSAITTQSDPRSLGKCIPSTPGQQVLAELLAKELQAMGLQNVVC DKYATVTGVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKILYTGGDVCLNKEKNIWMR LQEHAELNKYVGQDILFSDGTSVLGADDKAAIASVMEMVASLDSSKERHGDVVICCVPDE EIGLVGAKHLDVKARFNVDFAYTLDCCELGEMVYECFNAASATITFTGVSAHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAEYTARK TYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSIKGDFTAIDLLLEAMKKASVKPNIIPM RGGTDGAALSVKGLFTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCRNIVLLGADKRKKTP SVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/672 Sequence name : 672 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 4.343 CoefTot : -0.019 ChDiff : -7 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 1.329 0.054 0.535 MesoH : -0.178 0.603 -0.242 0.287 MuHd_075 : 18.665 11.447 5.340 1.965 MuHd_095 : 30.120 20.168 9.096 7.363 MuHd_100 : 29.813 20.222 8.324 7.891 MuHd_105 : 29.922 18.441 6.750 7.721 Hmax_075 : 0.583 8.050 -1.217 2.287 Hmax_095 : 4.113 7.438 -0.369 3.465 Hmax_100 : 4.100 9.300 -0.303 4.140 Hmax_105 : 4.433 8.750 -1.189 4.153 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7451 0.2549 DFMC : 0.7012 0.2988
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 LmxM.17.0140 MSLMPIEHRLEERFRRYSAITTQSDPRSLGKCIPSTPGQQVLAELLAKELQAMGLQNVVCDKYATVTGVKPGNVPGAPRI 80 GFICHLDTFDCGLCPHVKAQKILYTGGDVCLNKEKNIWMRLQEHAELNKYVGQDILFSDGTSVLGADDKAAIASVMEMVA 160 SLDSSKERHGDVVICCVPDEEIGLVGAKHLDVKARFNVDFAYTLDCCELGEMVYECFNAASATITFTGVSAHPMSAKGVM 240 VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAEYTARKTYMLDVAKKVQAKYPTGKVE 320 IEIEDVYANIANSIKGDFTAIDLLLEAMKKASVKPNIIPMRGGTDGAALSVKGLFTPNFFTGAHNFHSCFEFLPIPSFVK 400 AYEVCRNIVLLGADKRKKTPSVL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.17.0140 9 LMPIEHR|LE 0.076 . LmxM.17.0140 13 EHRLEER|FR 0.089 . LmxM.17.0140 15 RLEERFR|RY 0.131 . LmxM.17.0140 16 LEERFRR|YS 0.464 . LmxM.17.0140 27 TTQSDPR|SL 0.220 . LmxM.17.0140 31 DPRSLGK|CI 0.069 . LmxM.17.0140 48 LAELLAK|EL 0.067 . LmxM.17.0140 62 QNVVCDK|YA 0.073 . LmxM.17.0140 70 ATVTGVK|PG 0.052 . LmxM.17.0140 79 NVPGAPR|IG 0.073 . LmxM.17.0140 98 GLCPHVK|AQ 0.063 . LmxM.17.0140 101 PHVKAQK|IL 0.070 . LmxM.17.0140 113 GDVCLNK|EK 0.060 . LmxM.17.0140 115 VCLNKEK|NI 0.063 . LmxM.17.0140 120 EKNIWMR|LQ 0.127 . LmxM.17.0140 129 EHAELNK|YV 0.089 . LmxM.17.0140 149 VLGADDK|AA 0.077 . LmxM.17.0140 166 ASLDSSK|ER 0.057 . LmxM.17.0140 168 LDSSKER|HG 0.147 . LmxM.17.0140 188 IGLVGAK|HL 0.066 . LmxM.17.0140 193 AKHLDVK|AR 0.066 . LmxM.17.0140 195 HLDVKAR|FN 0.146 . LmxM.17.0140 237 AHPMSAK|GV 0.093 . LmxM.17.0140 256 FISQFNR|EE 0.099 . LmxM.17.0140 266 PECTELR|EG 0.079 . LmxM.17.0140 274 GYWWFAK|MD 0.064 . LmxM.17.0140 283 ANSTQAR|LE 0.110 . LmxM.17.0140 289 RLEAMVR|EH 0.088 . LmxM.17.0140 299 LAEYTAR|KT 0.093 . LmxM.17.0140 300 AEYTARK|TY 0.064 . LmxM.17.0140 308 YMLDVAK|KV 0.083 . LmxM.17.0140 309 MLDVAKK|VQ 0.095 . LmxM.17.0140 313 AKKVQAK|YP 0.082 . LmxM.17.0140 318 AKYPTGK|VE 0.071 . LmxM.17.0140 335 NIANSIK|GD 0.073 . LmxM.17.0140 349 LLLEAMK|KA 0.072 . LmxM.17.0140 350 LLEAMKK|AS 0.075 . LmxM.17.0140 354 MKKASVK|PN 0.071 . LmxM.17.0140 361 PNIIPMR|GG 0.111 . LmxM.17.0140 372 GAALSVK|GL 0.072 . LmxM.17.0140 400 PIPSFVK|AY 0.064 . LmxM.17.0140 406 KAYEVCR|NI 0.080 . LmxM.17.0140 415 VLLGADK|RK 0.050 . LmxM.17.0140 416 LLGADKR|KK 0.158 . LmxM.17.0140 417 LGADKRK|KT 0.101 . LmxM.17.0140 418 GADKRKK|TP 0.096 . ____________________________^_________________

  • Fasta :-

    >LmxM.17.0140 ATGTCTCTCATGCCGATCGAACACCGCCTGGAGGAGCGCTTTCGCCGCTACTCCGCCATC ACCACCCAGAGCGACCCCCGCAGCCTCGGCAAATGCATCCCATCCACCCCCGGGCAGCAG GTGCTGGCGGAGCTGCTCGCCAAGGAGCTTCAGGCGATGGGGCTGCAGAACGTCGTCTGC GACAAGTATGCGACGGTGACGGGGGTGAAGCCGGGCAATGTGCCTGGTGCCCCGCGCATC GGGTTTATCTGCCACCTCGACACCTTCGACTGCGGTCTCTGCCCGCACGTAAAGGCTCAG AAGATTCTCTACACGGGCGGTGATGTCTGTCTCAACAAGGAGAAGAATATTTGGATGCGG CTGCAGGAGCACGCAGAGCTGAACAAGTACGTTGGACAAGACATTCTTTTTAGCGACGGC ACCAGCGTGCTTGGCGCGGATGACAAGGCCGCCATTGCGTCGGTGATGGAGATGGTGGCC AGCCTCGACTCCAGCAAGGAGAGGCACGGCGACGTTGTTATTTGCTGTGTGCCGGATGAG GAGATCGGCTTGGTGGGCGCGAAGCACCTCGACGTAAAGGCGCGCTTCAACGTTGACTTT GCCTACACGCTCGACTGCTGCGAGCTGGGAGAGATGGTGTACGAGTGTTTCAACGCCGCG AGTGCCACAATTACGTTCACAGGTGTCTCGGCGCACCCCATGTCGGCCAAGGGCGTGATG GTCAACCCGCTGCTGATGGCCGTGGACTTCATTTCCCAGTTCAACCGCGAGGAGACCCCC GAGTGCACAGAACTGCGCGAGGGGTACTGGTGGTTCGCGAAGATGGATGCCAACTCCACC CAGGCGCGGCTCGAGGCAATGGTGCGCGAGCACGACCTCGCCGAGTACACGGCTCGCAAA ACCTACATGCTCGATGTAGCCAAGAAGGTGCAGGCCAAGTACCCGACGGGCAAGGTAGAG ATCGAGATAGAGGACGTGTACGCGAACATCGCGAACTCGATCAAGGGTGATTTCACCGCT ATTGATCTGCTACTGGAGGCGATGAAGAAGGCGAGCGTGAAGCCGAACATTATCCCGATG CGTGGGGGTACGGACGGCGCAGCGCTCTCCGTGAAGGGCCTCTTTACCCCCAACTTCTTC ACTGGTGCGCACAACTTCCACTCCTGCTTCGAGTTTCTTCCTATCCCGTCCTTCGTGAAA GCGTATGAGGTGTGCCGCAACATCGTCCTGCTTGGCGCTGACAAGCGCAAGAAGACACCG TCCGTGCTGTAG
  • Download Fasta

  • Fasta :-

    MSLMPIEHRLEERFRRYSAITTQSDPRSLGKCIPSTPGQQVLAELLAKELQAMGLQNVVC DKYATVTGVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKILYTGGDVCLNKEKNIWMR LQEHAELNKYVGQDILFSDGTSVLGADDKAAIASVMEMVASLDSSKERHGDVVICCVPDE EIGLVGAKHLDVKARFNVDFAYTLDCCELGEMVYECFNAASATITFTGVSAHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAEYTARK TYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSIKGDFTAIDLLLEAMKKASVKPNIIPM RGGTDGAALSVKGLFTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCRNIVLLGADKRKKTP SVL

  • title: metal binding site
  • coordinates: H85,D147,E180,E181,D205,H387
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.17.0140259 TNREETPECT0.991unspLmxM.17.0140259 TNREETPECT0.991unspLmxM.17.0140259 TNREETPECT0.991unspLmxM.17.014018 SFRRYSAITT0.99unspLmxM.17.0140165 SSLDSSKERH0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India