LmxM.19.0550 | metallo- peptidase, Clan MG, Family M24

_IDPredictionOTHERSPmTPCS_Position
LmxM.19.0550OTHER0.9999500.0000050.000045
No Results

  • Fasta :-

    >LmxM.19.0550 MPCEGCGVSDAGLQCPTCKKLSLPPSFFCTQDCFRGHWGTHKLKHTETKNLPATIPTMTE VDERLFNFTGPLRPGKITPRRAVPKEIARPDYAERNDGVSESEEKERGSHRVVAHNLKNL HEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGVTTDEIDRIVHEATTERGMYP SPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSDCSVVRSYTGHGIGKFFH TAPNVCHYKDNKSPGLIKPGHVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTM VCTPEGVELLTDWKDGIPFYQKQLKEWGIPIPAEDPSEIKI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/439 Sequence name : 439 Sequence length : 401 VALUES OF COMPUTED PARAMETERS Coef20 : 3.119 CoefTot : -0.253 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 1.353 0.097 0.479 MesoH : -0.936 0.161 -0.434 0.184 MuHd_075 : 19.049 8.504 4.927 3.458 MuHd_095 : 9.290 4.513 2.280 2.516 MuHd_100 : 13.360 5.775 1.113 2.854 MuHd_105 : 16.652 7.242 4.539 2.814 Hmax_075 : 12.600 11.500 5.193 3.690 Hmax_095 : 10.850 9.600 4.124 3.229 Hmax_100 : 10.400 9.000 2.454 2.930 Hmax_105 : 10.400 5.600 3.750 2.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9806 0.0194 DFMC : 0.9605 0.0395
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 401 LmxM.19.0550 MPCEGCGVSDAGLQCPTCKKLSLPPSFFCTQDCFRGHWGTHKLKHTETKNLPATIPTMTEVDERLFNFTGPLRPGKITPR 80 RAVPKEIARPDYAERNDGVSESEEKERGSHRVVAHNLKNLHEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGV 160 TTDEIDRIVHEATTERGMYPSPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP 240 DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSDCSVVRSYTGHGIGKFFHTAPNVCHYKDNKSPGLIKPG 320 HVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTMVCTPEGVELLTDWKDGIPFYQKQLKEWGIPIPAEDPSEIK 400 I 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 . 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.19.0550 19 LQCPTCK|KL 0.064 . LmxM.19.0550 20 QCPTCKK|LS 0.064 . LmxM.19.0550 35 CTQDCFR|GH 0.081 . LmxM.19.0550 42 GHWGTHK|LK 0.068 . LmxM.19.0550 44 WGTHKLK|HT 0.071 . LmxM.19.0550 49 LKHTETK|NL 0.088 . LmxM.19.0550 64 MTEVDER|LF 0.076 . LmxM.19.0550 73 NFTGPLR|PG 0.064 . LmxM.19.0550 76 GPLRPGK|IT 0.103 . LmxM.19.0550 80 PGKITPR|RA 0.100 . LmxM.19.0550 81 GKITPRR|AV 0.274 . LmxM.19.0550 85 PRRAVPK|EI 0.077 . LmxM.19.0550 89 VPKEIAR|PD 0.099 . LmxM.19.0550 95 RPDYAER|ND 0.109 . LmxM.19.0550 105 VSESEEK|ER 0.060 . LmxM.19.0550 107 ESEEKER|GS 0.117 . LmxM.19.0550 111 KERGSHR|VV 0.143 . LmxM.19.0550 118 VVAHNLK|NL 0.061 . LmxM.19.0550 130 YNNAELR|RS 0.144 . LmxM.19.0550 131 NNAELRR|SS 0.236 . LmxM.19.0550 137 RSSDILK|IK 0.064 . LmxM.19.0550 139 SDILKIK|RV 0.075 . LmxM.19.0550 140 DILKIKR|VN 0.105 . LmxM.19.0550 146 RVNALSR|EV 0.137 . LmxM.19.0550 157 IACAAVK|PG 0.056 . LmxM.19.0550 167 TTDEIDR|IV 0.105 . LmxM.19.0550 176 HEATTER|GM 0.097 . LmxM.19.0550 190 NYYNFPK|SV 0.149 . LmxM.19.0550 208 HGIPDNR|PL 0.090 . LmxM.19.0550 239 ETVFVGK|PD 0.069 . LmxM.19.0550 246 PDEESVK|IV 0.083 . LmxM.19.0550 263 AGISVVK|PD 0.060 . LmxM.19.0550 269 KPDELYR|YI 0.155 . LmxM.19.0550 278 GDAIEAR|AE 0.080 . LmxM.19.0550 281 IEARAEK|SD 0.206 . LmxM.19.0550 288 SDCSVVR|SY 0.182 . LmxM.19.0550 297 TGHGIGK|FF 0.085 . LmxM.19.0550 309 PNVCHYK|DN 0.068 . LmxM.19.0550 312 CHYKDNK|SP 0.083 . LmxM.19.0550 318 KSPGLIK|PG 0.057 . LmxM.19.0550 348 NWTSATK|DG 0.058 . LmxM.19.0550 351 SATKDGK|RT 0.076 . LmxM.19.0550 352 ATKDGKR|TA 0.164 . LmxM.19.0550 374 ELLTDWK|DG 0.058 . LmxM.19.0550 382 GIPFYQK|QL 0.059 . LmxM.19.0550 385 FYQKQLK|EW 0.079 . LmxM.19.0550 400 EDPSEIK|I- 0.058 . ____________________________^_________________

  • Fasta :-

    >LmxM.19.0550 ATGCCGTGCGAAGGCTGCGGCGTCAGTGACGCCGGCCTGCAGTGCCCCACCTGCAAGAAA CTGAGCCTGCCGCCGAGCTTCTTCTGCACGCAGGACTGCTTCCGGGGACATTGGGGAACG CACAAGCTGAAGCACACCGAGACGAAGAACCTGCCCGCCACGATCCCCACAATGACGGAG GTGGACGAGAGGCTCTTCAACTTCACGGGGCCGCTCCGTCCTGGAAAAATCACGCCACGC CGTGCTGTGCCGAAGGAGATAGCGCGGCCCGACTACGCGGAGCGAAACGACGGCGTTTCC GAGTCGGAGGAGAAGGAACGAGGCAGCCATCGCGTCGTTGCACACAACCTCAAGAACTTA CACGAAGACTACAACAACGCCGAGCTGCGCCGGAGCTCCGACATCCTCAAGATCAAGCGC GTGAACGCGCTCTCGCGTGAGGTGCTGGACATCGCCTGCGCGGCGGTGAAGCCGGGCGTC ACGACGGACGAAATCGACCGCATCGTCCACGAGGCGACGACTGAGCGTGGCATGTACCCG TCGCCGCTGAACTACTACAACTTCCCCAAGTCCGTCTGCACCAGCGTGAATGAGATCATC TGCCACGGCATCCCTGACAACCGCCCACTCGAGGAGGGCGACATCGTTAACATCGACGTC TCTTGCTACCTCGACGGCTTCCACGGCGATTTGAACGAAACGGTGTTTGTCGGCAAGCCG GACGAGGAAAGCGTGAAGATTGTGCACACGGCGTACGCCTGCATGATGGCCGGCATCAGC GTTGTGAAGCCGGATGAGCTCTACCGCTACATCGGGGACGCCATCGAGGCGCGGGCGGAG AAGTCGGACTGCAGTGTGGTGCGCAGCTACACCGGACATGGTATCGGCAAGTTCTTTCAC ACGGCACCGAACGTGTGCCACTACAAGGACAACAAAAGCCCCGGCCTCATCAAGCCCGGG CACGTTTTTACGATTGAGCCGATGATCAACCTTGGCACGTGGCAGGATGTAACCTGGCCT GATAACTGGACGAGTGCAACGAAGGATGGCAAGCGTACTGCGCAGTTTGAGCACACAATG GTGTGCACACCGGAAGGTGTAGAGCTTCTGACGGACTGGAAGGACGGCATACCCTTTTAC CAGAAGCAGCTGAAGGAATGGGGCATTCCGATCCCCGCCGAAGACCCCAGCGAAATTAAA ATCTGA
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  • Fasta :-

    MPCEGCGVSDAGLQCPTCKKLSLPPSFFCTQDCFRGHWGTHKLKHTETKNLPATIPTMTE VDERLFNFTGPLRPGKITPRRAVPKEIARPDYAERNDGVSESEEKERGSHRVVAHNLKNL HEDYNNAELRRSSDILKIKRVNALSREVLDIACAAVKPGVTTDEIDRIVHEATTERGMYP SPLNYYNFPKSVCTSVNEIICHGIPDNRPLEEGDIVNIDVSCYLDGFHGDLNETVFVGKP DEESVKIVHTAYACMMAGISVVKPDELYRYIGDAIEARAEKSDCSVVRSYTGHGIGKFFH TAPNVCHYKDNKSPGLIKPGHVFTIEPMINLGTWQDVTWPDNWTSATKDGKRTAQFEHTM VCTPEGVELLTDWKDGIPFYQKQLKEWGIPIPAEDPSEIKI

  • title: active site
  • coordinates: H202,D219,D230,H293,E326,E357
No Results
No Results
IDSitePeptideScoreMethod
LmxM.19.0550100 SNDGVSESEE0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India