LmxM.19.1420 | cysteine peptidase A (CPA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.19.1420SP0.0072000.9923100.000490CS pos: 22-23. CYG-SA. Pr: 0.3915
No Results

  • Fasta :-

    >LmxM.19.1420 MARRNPLLFAIVVTILFVVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEG HRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHKEDV HVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQM LVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKIT GFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNA KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATVESPHTPHVPTTTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/43 Sequence name : 43 Sequence length : 354 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : -1.838 ChDiff : -6 ZoneTo : 55 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.241 2.582 0.552 0.860 MesoH : -0.052 0.344 -0.300 0.287 MuHd_075 : 23.198 15.301 6.331 5.542 MuHd_095 : 25.730 19.293 7.177 4.970 MuHd_100 : 22.107 21.398 6.794 5.057 MuHd_105 : 25.025 22.513 8.267 5.938 Hmax_075 : 8.200 19.300 -1.096 6.640 Hmax_095 : 12.100 11.800 1.483 4.640 Hmax_100 : 17.600 20.600 3.647 6.470 Hmax_105 : 12.000 11.400 1.656 4.104 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6325 0.3675 DFMC : 0.7303 0.2697
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 354 LmxM.19.1420 MARRNPLLFAIVVTILFVVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQN 80 PHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIG 160 NIEGQWAASGHSLVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKIT 240 GFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGY 320 IRLAMGSNQCMLKNYPVSATVESPHTPHVPTTTA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.19.1420 3 ----MAR|RN 0.074 . LmxM.19.1420 4 ---MARR|NP 0.076 . LmxM.19.1420 46 AHYGSFK|KR 0.067 . LmxM.19.1420 47 HYGSFKK|RH 0.115 . LmxM.19.1420 48 YGSFKKR|HG 0.293 . LmxM.19.1420 51 FKKRHGK|AF 0.192 . LmxM.19.1420 62 DAEEGHR|FN 0.082 . LmxM.19.1420 67 HRFNAFK|QN 0.077 . LmxM.19.1420 90 HYDVSGK|FA 0.076 . LmxM.19.1420 101 TPQEFAK|LY 0.064 . LmxM.19.1420 111 NPDYYAR|HL 0.105 . LmxM.19.1420 114 YYARHLK|DH 0.146 . LmxM.19.1420 117 RHLKDHK|ED 0.059 . LmxM.19.1420 136 VMSVDWR|DK 0.224 . LmxM.19.1420 138 SVDWRDK|GA 0.065 . LmxM.19.1420 145 GAVTPVK|NQ 0.068 . LmxM.19.1420 226 TSGGGTR|PP 0.105 . LmxM.19.1420 238 EGEVGAK|IT 0.063 . LmxM.19.1420 251 LPHDEER|IA 0.178 . LmxM.19.1420 258 IAEWVEK|RG 0.060 . LmxM.19.1420 259 AEWVEKR|GP 0.166 . LmxM.19.1420 298 LIVGFNK|NA 0.060 . LmxM.19.1420 301 GFNKNAK|PP 0.072 . LmxM.19.1420 308 PPYWIVK|NS 0.068 . LmxM.19.1420 318 GSSWGEK|GY 0.076 . LmxM.19.1420 322 GEKGYIR|LA 0.101 . LmxM.19.1420 333 SNQCMLK|NY 0.061 . ____________________________^_________________

  • Fasta :-

    >LmxM.19.1420 ATGGCGCGCCGCAACCCCCTTTTGTTTGCGATAGTGGTGACGATCCTGTTCGTGGTGTGC TACGGTTCCGCTCTCATCGCCCAGACACCCCCCCCCGTCGACAACTTCGTTGCCTCAGCG CATTACGGAAGTTTCAAGAAGCGCCATGGCAAGGCCTTCGGCGGGGACGCCGAGGAGGGT CACCGCTTCAATGCCTTCAAGCAGAACATGCAGACAGCCTACTTCCTCAACACGCAGAAC CCCCACGCGCACTACGACGTGTCTGGCAAGTTCGCGGACCTCACCCCGCAGGAGTTCGCC AAGCTGTACCTGAATCCCGACTACTACGCGCGCCACCTCAAGGATCACAAGGAGGACGTG CACGTCGACGACAGCGCCCCCAGTGGTGTGATGTCGGTGGACTGGCGTGATAAGGGTGCC GTGACGCCGGTGAAGAACCAGGGATTATGCGGCTCGTGCTGGGCCTTCTCCGCCATTGGC AACATCGAAGGTCAGTGGGCTGCAAGCGGCCACTCGTTGGTTTCACTGTCAGAGCAGATG CTCGTGTCGTGCGACAACATCGATGAAGGGTGCAACGGCGGGCTGATGGACCAAGCAATG AACTGGATCATGCAGAGTCACAACGGCAGTGTGTTCACGGAGGCCAGCTATCCCTACACC TCTGGCGGCGGCACCAGACCGCCGTGCCATGACGAAGGTGAAGTTGGCGCTAAAATCACC GGTTTCCTCTCCCTGCCGCACGACGAGGAGCGGATCGCGGAGTGGGTGGAGAAGAGAGGC CCCGTCGCCGTCGCCGTCGACGCGACAACCTGGCAGCTGTACTTTGGCGGTGTGGTCTCC CTCTGCCTCGCGTGGTCGCTCAACCACGGTGTGCTCATTGTCGGCTTCAACAAAAACGCG AAACCGCCGTACTGGATCGTGAAGAACTCGTGGGGCTCCTCGTGGGGTGAGAAGGGGTAC ATCCGCCTTGCCATGGGCAGCAACCAGTGCATGCTCAAGAATTACCCCGTGTCGGCCACG GTTGAAAGCCCCCACACCCCGCACGTGCCGACGACAACGGCCTAG
  • Download Fasta

  • Fasta :-

    MARRNPLLFAIVVTILFVVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEG HRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHKEDV HVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQM LVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKIT GFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNA KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATVESPHTPHVPTTTA

    No Results
  • title: active site
  • coordinates: Q147,C153,H289,N309
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India