LmxM.25.2430 | Xaa-Pro aminopeptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
LmxM.25.2430OTHER0.9994060.0004200.000174
No Results

  • Fasta :-

    >LmxM.25.2430 MKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATVAEWERLSKKINLCPVANIVQDMMPPE TNVEKLYVRPAEFCGATCQERRAAILAEMEKKDCDLIILSALDEIAWFTNLRGGDVDYNP VFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACEDHIDFYPYEQFEADLKQLPQGRKALVD ERQTSEAVFRILKDVGTKAVRVVCGPAQKLKGVKNEVELKGFRDCHVRDGAALTRYLAWL HDQVVNRGATDLNEYDAATKLGGVPRAGGILCAAQFWLHLVHRP*VQCATTAPPPETGSA TIRADQLYLIDSGAHYWDGTTDVTRTICFSAPCDEQREAYTLVLKGHIALNSIVFPKGTG GARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGIGIRPVATEANMELHCIVSNE PGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWV DRYHAKVVTSTMPYLQKAGDQNAIEYLKYHAQPLCAVNEAHTVLSPDGKGAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/150 Sequence name : 150 Sequence length : 532 VALUES OF COMPUTED PARAMETERS Coef20 : 3.002 CoefTot : -0.884 ChDiff : -11 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.259 0.055 0.504 MesoH : -0.242 0.301 -0.294 0.279 MuHd_075 : 24.587 11.269 5.845 2.788 MuHd_095 : 14.343 15.187 6.201 3.893 MuHd_100 : 17.738 14.593 5.223 4.310 MuHd_105 : 20.968 14.506 4.743 4.741 Hmax_075 : 1.050 4.550 -2.142 1.843 Hmax_095 : 5.300 12.300 0.575 4.440 Hmax_100 : -0.100 7.000 -1.680 3.370 Hmax_105 : 1.575 5.337 -2.357 3.509 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9794 0.0206 DFMC : 0.9641 0.0359
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 532 LmxM.25.2430 MKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATVAEWERLSKKINLCPVANIVQDMMPPETNVEKLYVRPAEFCGATCQE 80 RRAAILAEMEKKDCDLIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACEDHIDFYP 160 YEQFEADLKQLPQGRKALVDERQTSEAVFRILKDVGTKAVRVVCGPAQKLKGVKNEVELKGFRDCHVRDGAALTRYLAWL 240 HDQVVNRGATDLNEYDAATKLGGVPRAGGILCAAQFWLHLVHRPXVQCATTAPPPETGSATIRADQLYLIDSGAHYWDGT 320 TDVTRTICFSAPCDEQREAYTLVLKGHIALNSIVFPKGTGGARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGI 400 GIRPVATEANMELHCIVSNEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWV 480 DRYHAKVVTSTMPYLQKAGDQNAIEYLKYHAQPLCAVNEAHTVLSPDGKGAK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.25.2430 2 -----MK|QG 0.070 . LmxM.25.2430 5 --MKQGK|PE 0.069 . LmxM.25.2430 22 AVNLGSK|AV 0.066 . LmxM.25.2430 39 TVAEWER|LS 0.083 . LmxM.25.2430 42 EWERLSK|KI 0.096 . LmxM.25.2430 43 WERLSKK|IN 0.082 . LmxM.25.2430 65 PETNVEK|LY 0.053 . LmxM.25.2430 69 VEKLYVR|PA 0.096 . LmxM.25.2430 81 GATCQER|RA 0.084 . LmxM.25.2430 82 ATCQERR|AA 0.170 . LmxM.25.2430 91 ILAEMEK|KD 0.060 . LmxM.25.2430 92 LAEMEKK|DC 0.132 . LmxM.25.2430 112 AWFTNLR|GG 0.076 . LmxM.25.2430 134 IDGHHEK|VR 0.061 . LmxM.25.2430 136 GHHEKVR|LY 0.084 . LmxM.25.2430 143 LYVNPDK|VT 0.074 . LmxM.25.2430 149 KVTGAVR|QA 0.086 . LmxM.25.2430 169 QFEADLK|QL 0.065 . LmxM.25.2430 175 KQLPQGR|KA 0.101 . LmxM.25.2430 176 QLPQGRK|AL 0.084 . LmxM.25.2430 182 KALVDER|QT 0.096 . LmxM.25.2430 190 TSEAVFR|IL 0.136 . LmxM.25.2430 193 AVFRILK|DV 0.245 . LmxM.25.2430 198 LKDVGTK|AV 0.071 . LmxM.25.2430 201 VGTKAVR|VV 0.076 . LmxM.25.2430 209 VCGPAQK|LK 0.064 . LmxM.25.2430 211 GPAQKLK|GV 0.103 . LmxM.25.2430 214 QKLKGVK|NE 0.053 . LmxM.25.2430 220 KNEVELK|GF 0.065 . LmxM.25.2430 223 VELKGFR|DC 0.079 . LmxM.25.2430 228 FRDCHVR|DG 0.101 . LmxM.25.2430 235 DGAALTR|YL 0.096 . LmxM.25.2430 247 HDQVVNR|GA 0.172 . LmxM.25.2430 260 EYDAATK|LG 0.057 . LmxM.25.2430 266 KLGGVPR|AG 0.117 . LmxM.25.2430 283 WLHLVHR|PX 0.106 . LmxM.25.2430 303 TGSATIR|AD 0.108 . LmxM.25.2430 325 GTTDVTR|TI 0.087 . LmxM.25.2430 337 APCDEQR|EA 0.104 . LmxM.25.2430 345 AYTLVLK|GH 0.056 . LmxM.25.2430 357 NSIVFPK|GT 0.105 . LmxM.25.2430 363 KGTGGAR|LD 0.076 . LmxM.25.2430 369 RLDTLAR|MA 0.099 . LmxM.25.2430 403 PHGIGIR|PV 0.124 . LmxM.25.2430 425 NEPGYYK|DG 0.070 . LmxM.25.2430 432 DGHYGIR|IE 0.082 . LmxM.25.2430 443 EEVVECR|TK 0.080 . LmxM.25.2430 445 VVECRTK|YS 0.072 . LmxM.25.2430 464 TMAPLCR|DL 0.130 . LmxM.25.2430 477 LLTETER|AW 0.080 . LmxM.25.2430 482 ERAWVDR|YH 0.166 . LmxM.25.2430 486 VDRYHAK|VV 0.091 . LmxM.25.2430 497 TMPYLQK|AG 0.063 . LmxM.25.2430 508 NAIEYLK|YH 0.061 . LmxM.25.2430 529 VLSPDGK|GA 0.085 . LmxM.25.2430 532 PDGKGAK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >LmxM.25.2430 ATGAAGCAAGGAAAGCCAGAGGTCCCGTCGCTCGACGAGTGGATTGCCGTCAATCTCGGC TCCAAAGCAGTTGTTGGCATGAGCCCGTACGTCGCCACCGTGGCGGAGTGGGAGCGGCTG AGCAAGAAGATCAATCTGTGTCCGGTGGCGAACATCGTCCAGGACATGATGCCGCCGGAG ACGAACGTGGAAAAACTGTACGTGCGCCCCGCTGAGTTCTGCGGTGCCACCTGCCAGGAG CGGCGCGCCGCGATTCTCGCAGAGATGGAGAAGAAGGACTGCGACCTGATCATTCTGTCC GCGCTGGATGAGATCGCGTGGTTCACGAATCTGCGCGGCGGCGACGTGGACTACAACCCC GTCTTCTACGCGTACGCTGTCATTGACGGGCACCACGAAAAAGTGCGCCTCTACGTGAAC CCAGACAAGGTCACAGGTGCAGTGCGCCAGGCGTGCGAGGATCACATCGACTTCTACCCG TACGAGCAGTTCGAGGCGGATCTCAAGCAGCTACCACAGGGTCGCAAGGCCCTCGTCGAC GAGCGCCAGACGAGCGAGGCCGTCTTTCGCATCTTGAAGGATGTCGGCACCAAGGCAGTG CGCGTCGTTTGCGGCCCCGCGCAGAAGTTGAAGGGGGTCAAGAATGAGGTCGAGCTCAAG GGCTTCCGCGACTGCCACGTACGCGACGGTGCTGCACTGACGCGCTACCTCGCCTGGCTG CACGACCAGGTCGTGAACAGGGGTGCGACGGACCTGAACGAGTACGACGCGGCCACGAAG CTCGGAGGAGTTCCGCGCGCAGGGGGAATACTTTGTGCAGCTCAGTTTTGGCTCCATCTC GTCCATCGGCCCTAAGTGCAATGTGCCACTACTGCCCCCCCCCCCGAGACGGGCTCTGCC ACCATTCGCGCGGACCAGCTGTACTTAATCGACAGTGGTGCGCACTACTGGGACGGTACC ACCGATGTGACGCGCACTATCTGCTTCTCAGCACCGTGTGATGAGCAGCGCGAGGCCTAC ACGCTTGTGCTCAAAGGGCACATCGCACTCAACAGTATCGTTTTTCCCAAGGGCACAGGC GGTGCCCGTCTCGACACTCTGGCGCGTATGGCGCTCTGGGGCGTGGGACTGGACTACGCC CACGGCACTGGGCATGGCGTGGGATCCTTCCTCAACGTGCACGAGGGCCCCCACGGAATC GGCATTCGCCCAGTTGCTACGGAGGCGAACATGGAGCTGCACTGCATCGTGTCGAACGAG CCTGGCTACTACAAGGACGGGCACTACGGCATCCGCATTGAGAACCTCGAAGAGGTGGTC GAGTGTCGGACCAAGTACAGCGCGACCGGCTTCTACACCATGTCGCACCTCACGATGGCG CCCCTGTGCCGCGACCTCATCGACGTGAGCCTCCTCACAGAGACGGAGCGCGCCTGGGTA GACCGATACCACGCCAAGGTGGTGACAAGCACCATGCCGTACCTGCAAAAGGCGGGCGAC CAGAACGCCATCGAGTACCTCAAATACCATGCGCAACCTCTCTGTGCGGTGAATGAGGCG CACACCGTGCTCAGCCCAGACGGGAAAGGTGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MKQGKPEVPSLDEWIAVNLGSKAVVGMSPYVATVAEWERLSKKINLCPVANIVQDMMPPE TNVEKLYVRPAEFCGATCQERRAAILAEMEKKDCDLIILSALDEIAWFTNLRGGDVDYNP VFYAYAVIDGHHEKVRLYVNPDKVTGAVRQACEDHIDFYPYEQFEADLKQLPQGRKALVD ERQTSEAVFRILKDVGTKAVRVVCGPAQKLKGVKNEVELKGFRDCHVRDGAALTRYLAWL HDQVVNRGATDLNEYDAATKLGGVPRAGGILCAAQFWLHLVHRP*VQCATTAPPPETGSA TIRADQLYLIDSGAHYWDGTTDVTRTICFSAPCDEQREAYTLVLKGHIALNSIVFPKGTG GARLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGIGIRPVATEANMELHCIVSNE PGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWV DRYHAKVVTSTMPYLQKAGDQNAIEYLKYHAQPLCAVNEAHTVLSPDGKGAK

  • title: active site
  • coordinates: H282,D311,D322,S389,E420,E434
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India