LmxM.30.0100 | metallo-peptidase, Clan MK, Family M67

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_IDPredictionOTHERSPmTPCS_Position
LmxM.30.0100OTHER0.9603340.0039050.035761
No Results

  • Fasta :-

    >LmxM.30.0100 MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRQTYITPPGTGFLPRETAIHHSQHVLQVV QRAMRDAAVTPADIDIISYTKGPGMGGPLSVGCTVAKTLSLLWGKPLVGVNHCIGHIEMG RVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAVGNCLDRVARLLGISNDPAPG YNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTESGVCEVFQKRRKVAP SLTSTPVSAGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQE MMQLMAAERGGRCFDMDQRYCIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYV SWRD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/765 Sequence name : 765 Sequence length : 364 VALUES OF COMPUTED PARAMETERS Coef20 : 3.750 CoefTot : 0.128 ChDiff : 2 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.335 1.418 0.200 0.519 MesoH : -0.007 0.459 -0.218 0.290 MuHd_075 : 3.611 3.081 2.754 0.610 MuHd_095 : 34.302 17.905 8.921 6.665 MuHd_100 : 25.020 14.065 5.853 4.667 MuHd_105 : 14.976 8.481 2.363 2.640 Hmax_075 : 7.583 11.783 0.596 3.955 Hmax_095 : 15.200 13.037 2.773 5.198 Hmax_100 : 5.800 11.800 -0.123 3.480 Hmax_105 : 7.200 9.100 -0.271 2.970 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8984 0.1016 DFMC : 0.9111 0.0889
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 364 LmxM.30.0100 MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRQTYITPPGTGFLPRETAIHHSQHVLQVVQRAMRDAAVTPADIDIISYT 80 KGPGMGGPLSVGCTVAKTLSLLWGKPLVGVNHCIGHIEMGRVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAV 160 GNCLDRVARLLGISNDPAPGYNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTESGVCEVFQKRRKVAP 240 SLTSTPVSAGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQEMMQLMAAERGGRCFDMDQRY 320 CIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYVSWRD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.0100 2 -----MK|RT 0.059 . LmxM.30.0100 3 ----MKR|TL 0.231 . LmxM.30.0100 15 IEGSANK|IG 0.059 . LmxM.30.0100 32 TVLSNVR|QT 0.084 . LmxM.30.0100 46 GTGFLPR|ET 0.116 . LmxM.30.0100 62 VLQVVQR|AM 0.119 . LmxM.30.0100 65 VVQRAMR|DA 0.302 . LmxM.30.0100 81 DIISYTK|GP 0.067 . LmxM.30.0100 97 VGCTVAK|TL 0.064 . LmxM.30.0100 105 LSLLWGK|PL 0.064 . LmxM.30.0100 121 GHIEMGR|VV 0.136 . LmxM.30.0100 125 MGRVVTK|SE 0.093 . LmxM.30.0100 148 IAYADHR|YR 0.093 . LmxM.30.0100 150 YADHRYR|IF 0.108 . LmxM.30.0100 166 VGNCLDR|VA 0.084 . LmxM.30.0100 169 CLDRVAR|LL 0.319 . LmxM.30.0100 186 GYNIEQK|AK 0.065 . LmxM.30.0100 188 NIEQKAK|KG 0.062 . LmxM.30.0100 189 IEQKAKK|GK 0.118 . LmxM.30.0100 191 QKAKKGK|CY 0.082 . LmxM.30.0100 195 KGKCYIR|LP 0.090 . LmxM.30.0100 201 RLPYTVK|GM 0.072 . LmxM.30.0100 234 VCEVFQK|RR 0.057 . LmxM.30.0100 235 CEVFQKR|RK 0.108 . LmxM.30.0100 236 EVFQKRR|KV 0.240 . LmxM.30.0100 237 VFQKRRK|VA 0.080 . LmxM.30.0100 276 LVEVTER|AM 0.099 . LmxM.30.0100 282 RAMSQIK|AS 0.070 . LmxM.30.0100 296 GGVGCNK|RL 0.059 . LmxM.30.0100 297 GVGCNKR|LQ 0.173 . LmxM.30.0100 309 QLMAAER|GG 0.082 . LmxM.30.0100 312 AAERGGR|CF 0.205 . LmxM.30.0100 319 CFDMDQR|YC 0.089 . LmxM.30.0100 352 EATITQR|FR 0.082 . LmxM.30.0100 354 TITQRFR|TD 0.095 . LmxM.30.0100 363 EVYVSWR|D- 0.121 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.0100 ATGAAGCGCACACTGTCCCTCGGGATCGAGGGAAGCGCCAATAAGATCGGTGTGGGGGTG GTGGATCAGAGCGGTACGGTGCTCTCTAACGTACGCCAAACCTACATCACCCCTCCTGGG ACCGGGTTCCTGCCGCGCGAGACGGCCATCCACCACTCTCAGCACGTGCTGCAGGTCGTA CAGCGCGCCATGCGCGATGCCGCGGTGACGCCAGCCGACATCGACATCATCTCCTACACC AAGGGCCCTGGCATGGGCGGGCCGCTCTCTGTCGGCTGCACCGTGGCCAAAACACTCTCC CTCCTGTGGGGAAAGCCGCTGGTGGGTGTGAACCACTGCATCGGGCACATTGAGATGGGC CGCGTCGTCACGAAGAGCGAGAACCCCGTGGTGCTGTACGTCAGCGGGGGCAACACGCAA GTCATCGCCTACGCTGATCACCGCTACCGCATCTTCGGTGAGACGATCGACATTGCCGTA GGCAACTGCCTGGACCGTGTGGCCCGCCTCCTCGGCATCTCAAACGACCCGGCACCGGGC TACAACATTGAACAGAAGGCCAAGAAGGGCAAGTGCTACATCCGCTTGCCCTACACCGTG AAGGGAATGGACATGTCGTTCACCGGCATCCTCTCCTACATTGAACAGCTCGTGCACCAC CCTCAATTCACTGAGTCGGGTGTTTGCGAGGTGTTCCAAAAGCGGCGCAAGGTAGCACCG TCGCTGACGAGCACGCCGGTGTCGGCCGGCGAGACCTTCAACACGGACGACATCTGCTTC TCCCTGCAGGAGACGATCTTTGCCATGTTGGTCGAAGTGACGGAGCGCGCCATGTCGCAA ATCAAGGCATCTGACGTGCTCATAGTCGGCGGGGTGGGCTGCAACAAGCGCCTGCAGGAG ATGATGCAGCTGATGGCGGCAGAGCGTGGGGGTCGCTGCTTCGACATGGATCAGCGATAC TGCATCGACAATGGCTGCATGATCGCGTACGCCGGGCTGCTCCAGTACCTGAGTGGGTCC TTCACGACCATGGCGGAGGCGACCATCACGCAGCGCTTTCGCACCGATGAAGTTTACGTT TCCTGGCGCGATTGA
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  • Fasta :-

    MKRTLSLGIEGSANKIGVGVVDQSGTVLSNVRQTYITPPGTGFLPRETAIHHSQHVLQVV QRAMRDAAVTPADIDIISYTKGPGMGGPLSVGCTVAKTLSLLWGKPLVGVNHCIGHIEMG RVVTKSENPVVLYVSGGNTQVIAYADHRYRIFGETIDIAVGNCLDRVARLLGISNDPAPG YNIEQKAKKGKCYIRLPYTVKGMDMSFTGILSYIEQLVHHPQFTESGVCEVFQKRRKVAP SLTSTPVSAGETFNTDDICFSLQETIFAMLVEVTERAMSQIKASDVLIVGGVGCNKRLQE MMQLMAAERGGRCFDMDQRYCIDNGCMIAYAGLLQYLSGSFTTMAEATITQRFRTDEVYV SWRD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.0100279 SERAMSQIKA0.996unspLmxM.30.0100279 SERAMSQIKA0.996unspLmxM.30.0100279 SERAMSQIKA0.996unspLmxM.30.0100361 SEVYVSWRD-0.996unspLmxM.30.0100241 SKVAPSLTST0.991unspLmxM.30.0100248 SSTPVSAGET0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India