LmxM.30.0140 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.0140OTHER0.9999690.0000210.000010
No Results

  • Fasta :-

    >LmxM.30.0140 MAEIKVKWGKENLTMEVDLGSTVGAFKEALKAKTGVPVEKQKLMGLKPAMNKDDATLSAA GLVSGKTVMLIGSAESTATVPMVQATVVEANETGGYTATATTSNGLKNIANTCYLNSALQ MMRSIPEIREVLEAYRGDNALLQQLRAVLQLLESTKDAVMPLQFWTTLVQTNPTFGERNE HGGFMQQDSQEVLNMLLQAVNSVLPEKYAHLFEGKLHQTLTCVDDPADKGKESDVPFTML TCNITGEVQTLEAGLEHAFDEHFTAPCEALQKDAAQFTRVSKLTEAPEYVFVHMVRFSWR GDIQKKAKILKPITFPFTLDTTIISTEALKAAQKPVREVVRERRDKELERRRRPRTEKSS PVDKSEEEKVPLILKNESGYYDLCGVISHKGRSADGGHYVYWGKKADTWLVYDDEHVAAV SEEDVKRLRGVGEAHIAYVLLYRSRDPVTRTPVIPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/82 Sequence name : 82 Sequence length : 456 VALUES OF COMPUTED PARAMETERS Coef20 : 3.317 CoefTot : 0.141 ChDiff : -5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 1.406 0.126 0.494 MesoH : 0.097 0.327 -0.228 0.225 MuHd_075 : 13.547 4.080 4.486 2.556 MuHd_095 : 22.646 13.667 5.966 3.987 MuHd_100 : 16.590 9.668 4.482 2.700 MuHd_105 : 7.250 5.661 2.415 0.977 Hmax_075 : 0.933 4.200 -1.758 3.313 Hmax_095 : -2.625 7.087 -2.459 2.450 Hmax_100 : -6.200 6.200 -2.946 2.160 Hmax_105 : -2.300 2.800 -3.102 2.123 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9935 0.0065 DFMC : 0.9914 0.0086
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 456 LmxM.30.0140 MAEIKVKWGKENLTMEVDLGSTVGAFKEALKAKTGVPVEKQKLMGLKPAMNKDDATLSAAGLVSGKTVMLIGSAESTATV 80 PMVQATVVEANETGGYTATATTSNGLKNIANTCYLNSALQMMRSIPEIREVLEAYRGDNALLQQLRAVLQLLESTKDAVM 160 PLQFWTTLVQTNPTFGERNEHGGFMQQDSQEVLNMLLQAVNSVLPEKYAHLFEGKLHQTLTCVDDPADKGKESDVPFTML 240 TCNITGEVQTLEAGLEHAFDEHFTAPCEALQKDAAQFTRVSKLTEAPEYVFVHMVRFSWRGDIQKKAKILKPITFPFTLD 320 TTIISTEALKAAQKPVREVVRERRDKELERRRRPRTEKSSPVDKSEEEKVPLILKNESGYYDLCGVISHKGRSADGGHYV 400 YWGKKADTWLVYDDEHVAAVSEEDVKRLRGVGEAHIAYVLLYRSRDPVTRTPVIPL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.0140 5 --MAEIK|VK 0.064 . LmxM.30.0140 7 MAEIKVK|WG 0.074 . LmxM.30.0140 10 IKVKWGK|EN 0.072 . LmxM.30.0140 27 STVGAFK|EA 0.066 . LmxM.30.0140 31 AFKEALK|AK 0.061 . LmxM.30.0140 33 KEALKAK|TG 0.089 . LmxM.30.0140 40 TGVPVEK|QK 0.072 . LmxM.30.0140 42 VPVEKQK|LM 0.070 . LmxM.30.0140 47 QKLMGLK|PA 0.072 . LmxM.30.0140 52 LKPAMNK|DD 0.061 . LmxM.30.0140 66 AGLVSGK|TV 0.072 . LmxM.30.0140 107 TTSNGLK|NI 0.059 . LmxM.30.0140 123 SALQMMR|SI 0.126 . LmxM.30.0140 129 RSIPEIR|EV 0.120 . LmxM.30.0140 136 EVLEAYR|GD 0.081 . LmxM.30.0140 146 ALLQQLR|AV 0.113 . LmxM.30.0140 156 QLLESTK|DA 0.068 . LmxM.30.0140 178 NPTFGER|NE 0.098 . LmxM.30.0140 207 NSVLPEK|YA 0.073 . LmxM.30.0140 215 AHLFEGK|LH 0.056 . LmxM.30.0140 229 VDDPADK|GK 0.059 . LmxM.30.0140 231 DPADKGK|ES 0.084 . LmxM.30.0140 272 PCEALQK|DA 0.073 . LmxM.30.0140 279 DAAQFTR|VS 0.081 . LmxM.30.0140 282 QFTRVSK|LT 0.130 . LmxM.30.0140 296 VFVHMVR|FS 0.104 . LmxM.30.0140 300 MVRFSWR|GD 0.124 . LmxM.30.0140 305 WRGDIQK|KA 0.074 . LmxM.30.0140 306 RGDIQKK|AK 0.099 . LmxM.30.0140 308 DIQKKAK|IL 0.082 . LmxM.30.0140 311 KKAKILK|PI 0.066 . LmxM.30.0140 330 ISTEALK|AA 0.062 . LmxM.30.0140 334 ALKAAQK|PV 0.074 . LmxM.30.0140 337 AAQKPVR|EV 0.133 . LmxM.30.0140 341 PVREVVR|ER 0.096 . LmxM.30.0140 343 REVVRER|RD 0.084 . LmxM.30.0140 344 EVVRERR|DK 0.499 . LmxM.30.0140 346 VRERRDK|EL 0.143 . LmxM.30.0140 350 RDKELER|RR 0.070 . LmxM.30.0140 351 DKELERR|RR 0.095 . LmxM.30.0140 352 KELERRR|RP 0.097 . LmxM.30.0140 353 ELERRRR|PR 0.267 . LmxM.30.0140 355 ERRRRPR|TE 0.330 . LmxM.30.0140 358 RRPRTEK|SS 0.163 . LmxM.30.0140 364 KSSPVDK|SE 0.115 . LmxM.30.0140 369 DKSEEEK|VP 0.058 . LmxM.30.0140 375 KVPLILK|NE 0.054 . LmxM.30.0140 390 CGVISHK|GR 0.070 . LmxM.30.0140 392 VISHKGR|SA 0.430 . LmxM.30.0140 404 HYVYWGK|KA 0.071 . LmxM.30.0140 405 YVYWGKK|AD 0.079 . LmxM.30.0140 426 VSEEDVK|RL 0.063 . LmxM.30.0140 427 SEEDVKR|LR 0.250 . LmxM.30.0140 429 EDVKRLR|GV 0.148 . LmxM.30.0140 443 AYVLLYR|SR 0.131 . LmxM.30.0140 445 VLLYRSR|DP 0.080 . LmxM.30.0140 450 SRDPVTR|TP 0.086 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.0140 ATGGCCGAAATCAAAGTCAAGTGGGGTAAGGAGAACCTCACGATGGAAGTGGACCTGGGG AGTACAGTGGGTGCCTTCAAGGAGGCGCTCAAAGCCAAGACCGGGGTGCCAGTGGAGAAG CAGAAGCTCATGGGCCTTAAGCCCGCCATGAACAAGGATGACGCTACGCTCAGCGCCGCC GGCCTCGTGAGCGGCAAGACGGTCATGCTGATTGGGTCAGCGGAGAGCACTGCAACGGTG CCCATGGTGCAGGCGACTGTTGTAGAGGCGAACGAGACAGGTGGCTACACCGCGACTGCG ACGACCTCGAATGGCTTGAAGAATATCGCCAACACGTGCTACCTGAACTCGGCTCTGCAG ATGATGCGGAGTATTCCGGAGATTCGGGAAGTGCTCGAGGCGTACCGCGGCGACAACGCA CTTCTGCAGCAGCTCCGTGCCGTGCTACAGTTGCTGGAGAGCACGAAGGATGCGGTGATG CCGCTGCAGTTCTGGACGACGCTCGTGCAGACAAATCCAACGTTTGGTGAGCGCAACGAG CACGGTGGTTTCATGCAGCAGGACTCGCAGGAGGTGCTGAACATGCTGCTCCAGGCCGTA AACTCCGTGCTGCCCGAGAAGTACGCGCACCTCTTCGAAGGCAAGCTGCACCAGACCCTC ACCTGCGTCGACGACCCGGCTGACAAGGGCAAGGAGTCCGACGTTCCCTTCACGATGCTC ACCTGCAACATCACCGGCGAGGTGCAGACGCTCGAGGCAGGGCTCGAGCACGCCTTCGAC GAGCACTTCACCGCACCCTGCGAGGCCCTGCAGAAAGACGCCGCCCAGTTCACTCGCGTT AGCAAGCTCACCGAAGCACCGGAATATGTCTTTGTGCACATGGTGCGCTTTTCCTGGCGC GGAGACATTCAAAAGAAGGCGAAGATCCTCAAGCCGATCACGTTCCCCTTCACCCTCGAC ACCACCATCATCTCCACCGAAGCTCTCAAGGCGGCGCAGAAGCCGGTGCGCGAGGTTGTC CGCGAGCGGCGCGACAAGGAGCTGGAGCGGCGCCGCCGCCCCCGCACAGAGAAGTCGTCG CCAGTGGACAAATCGGAGGAGGAGAAGGTGCCCCTGATCCTCAAGAATGAGAGCGGATAC TATGACCTGTGCGGCGTCATCTCGCACAAGGGCCGCAGCGCGGACGGCGGCCACTACGTC TACTGGGGTAAGAAAGCAGACACGTGGCTCGTCTACGATGACGAGCACGTGGCGGCCGTT TCGGAGGAGGACGTGAAGCGGCTGCGTGGTGTTGGAGAAGCTCACATCGCCTACGTCTTG CTATATCGCAGCCGCGACCCCGTCACACGAACACCGGTTATTCCACTTTAG
  • Download Fasta

  • Fasta :-

    MAEIKVKWGKENLTMEVDLGSTVGAFKEALKAKTGVPVEKQKLMGLKPAMNKDDATLSAA GLVSGKTVMLIGSAESTATVPMVQATVVEANETGGYTATATTSNGLKNIANTCYLNSALQ MMRSIPEIREVLEAYRGDNALLQQLRAVLQLLESTKDAVMPLQFWTTLVQTNPTFGERNE HGGFMQQDSQEVLNMLLQAVNSVLPEKYAHLFEGKLHQTLTCVDDPADKGKESDVPFTML TCNITGEVQTLEAGLEHAFDEHFTAPCEALQKDAAQFTRVSKLTEAPEYVFVHMVRFSWR GDIQKKAKILKPITFPFTLDTTIISTEALKAAQKPVREVVRERRDKELERRRRPRTEKSS PVDKSEEEKVPLILKNESGYYDLCGVISHKGRSADGGHYVYWGKKADTWLVYDDEHVAAV SEEDVKRLRGVGEAHIAYVLLYRSRDPVTRTPVIPL

  • title: Active Site
  • coordinates: N108,C113,H398,D414
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.0140365 SPVDKSEEEK0.997unspLmxM.30.0140365 SPVDKSEEEK0.997unspLmxM.30.0140365 SPVDKSEEEK0.997unspLmxM.30.0140421 SVAAVSEEDV0.993unspLmxM.30.0140154 SQLLESTKDA0.997unspLmxM.30.0140360 STEKSSPVDK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India