LmxM.30.1130 | amidohydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.1130OTHER0.9999040.0000340.000063
No Results

  • Fasta :-

    >LmxM.30.1130 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGKWLHI SQPESNCVVADLKGGAGDGPTVALRADIDALPVEELTDVPFASRKRGVMHACGHDTHAAM LLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAKMMIEKGCMEGVAMVFAEHIMPEEKA PTGTVLVRKGPILSSSDTLHAEIVGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPIVTITAIASSSDSYNVIPDRVTLKGTLRCTDKQVRVDAKKAVADVLHGICGSFGAM CDFKWLPGYDVTVNADSAYDVGMRVLTQVMPSTDHVVELSACMSPSEDFSEFAKVAPANY VGIGCYNPGRGCTEVNHNAKFKVDEDAMKIGVKVHYGTIHELLMQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/406 Sequence name : 406 Sequence length : 405 VALUES OF COMPUTED PARAMETERS Coef20 : 3.546 CoefTot : -0.111 ChDiff : -13 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.694 0.232 0.545 MesoH : -0.223 0.452 -0.215 0.247 MuHd_075 : 18.219 13.452 4.704 6.258 MuHd_095 : 35.024 19.817 8.295 6.032 MuHd_100 : 28.744 14.991 7.278 4.332 MuHd_105 : 24.005 15.730 7.692 4.378 Hmax_075 : -8.000 6.000 -2.549 2.840 Hmax_095 : -5.337 6.475 -2.733 1.417 Hmax_100 : -5.400 4.800 -2.737 1.080 Hmax_105 : -2.800 9.567 -0.721 2.147 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9038 0.0962 DFMC : 0.9511 0.0489
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 405 LmxM.30.1130 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGKWLHISQPESNCVVADLKGGAGDGP 80 TVALRADIDALPVEELTDVPFASRKRGVMHACGHDTHAAMLLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAKMMIEK 160 GCMEGVAMVFAEHIMPEEKAPTGTVLVRKGPILSSSDTLHAEIVGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP 240 SKCPIVTITAIASSSDSYNVIPDRVTLKGTLRCTDKQVRVDAKKAVADVLHGICGSFGAMCDFKWLPGYDVTVNADSAYD 320 VGMRVLTQVMPSTDHVVELSACMSPSEDFSEFAKVAPANYVGIGCYNPGRGCTEVNHNAKFKVDEDAMKIGVKVHYGTIH 400 ELLMQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.1130 6 -MPAINR|EE 0.063 . LmxM.30.1130 11 NREELDR|RV 0.178 . LmxM.30.1130 12 REELDRR|VE 0.095 . LmxM.30.1130 24 DQVVAWR|RY 0.087 . LmxM.30.1130 25 QVVAWRR|YI 0.165 . LmxM.30.1130 50 IMGELQK|MD 0.063 . LmxM.30.1130 56 KMDAEGK|WL 0.073 . LmxM.30.1130 73 CVVADLK|GG 0.061 . LmxM.30.1130 85 GPTVALR|AD 0.109 . LmxM.30.1130 104 DVPFASR|KR 0.070 . LmxM.30.1130 105 VPFASRK|RG 0.070 . LmxM.30.1130 106 PFASRKR|GV 0.312 . LmxM.30.1130 126 MLLGATK|LL 0.054 . LmxM.30.1130 134 LLEDAGR|IK 0.101 . LmxM.30.1130 136 EDAGRIK|GT 0.071 . LmxM.30.1130 140 RIKGTVR|LL 0.083 . LmxM.30.1130 155 VPPGGAK|MM 0.069 . LmxM.30.1130 160 AKMMIEK|GC 0.081 . LmxM.30.1130 179 HIMPEEK|AP 0.058 . LmxM.30.1130 188 TGTVLVR|KG 0.072 . LmxM.30.1130 189 GTVLVRK|GP 0.076 . LmxM.30.1130 206 HAEIVGR|GG 0.123 . LmxM.30.1130 236 LQQVVSR|RM 0.082 . LmxM.30.1130 237 QQVVSRR|MP 0.129 . LmxM.30.1130 242 RRMPPSK|CP 0.074 . LmxM.30.1130 264 YNVIPDR|VT 0.080 . LmxM.30.1130 268 PDRVTLK|GT 0.067 . LmxM.30.1130 272 TLKGTLR|CT 0.113 . LmxM.30.1130 276 TLRCTDK|QV 0.076 . LmxM.30.1130 279 CTDKQVR|VD 0.071 . LmxM.30.1130 283 QVRVDAK|KA 0.075 . LmxM.30.1130 284 VRVDAKK|AV 0.220 . LmxM.30.1130 304 GAMCDFK|WL 0.071 . LmxM.30.1130 324 AYDVGMR|VL 0.089 . LmxM.30.1130 354 DFSEFAK|VA 0.079 . LmxM.30.1130 370 GCYNPGR|GC 0.106 . LmxM.30.1130 380 EVNHNAK|FK 0.081 . LmxM.30.1130 382 NHNAKFK|VD 0.089 . LmxM.30.1130 389 VDEDAMK|IG 0.060 . LmxM.30.1130 393 AMKIGVK|VH 0.059 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.1130 ATGCCGGCCATCAACCGCGAGGAGCTCGACCGCCGTGTGGAGCAGATCTACGACCAGGTG GTTGCCTGGCGCCGCTACATCCACGAGAACCCGGACCTCTCGTTCGAGGAGCAGCCGACG GCGGCCTACATCATGGGTGAGCTGCAGAAGATGGACGCGGAGGGGAAATGGCTGCACATC AGCCAGCCTGAGAGCAACTGCGTCGTTGCTGACCTGAAGGGTGGCGCTGGCGACGGCCCG ACTGTTGCGCTGCGTGCGGACATCGACGCGCTGCCTGTGGAGGAGCTGACGGACGTGCCG TTTGCGTCGAGGAAGCGGGGCGTGATGCACGCGTGCGGCCACGACACGCACGCGGCGATG CTGCTCGGCGCGACAAAGCTGCTGCTGGAGGATGCGGGGCGGATCAAAGGCACCGTGCGC CTGCTGTTTCAGCCTGCGGAGGAGGTGCCGCCGGGTGGCGCCAAGATGATGATCGAGAAG GGCTGCATGGAGGGCGTGGCGATGGTGTTTGCCGAGCACATTATGCCGGAGGAGAAGGCT CCTACGGGCACTGTTTTGGTGAGGAAGGGCCCGATTCTCTCCAGCAGTGACACACTACAC GCGGAGATAGTCGGCCGCGGTGGGCATGCCTCGATGCCGGAGAGCTCTATCGACCCTATT GCCATTGCGTGCCTTGCCGTAACTGCCCTTCAACAGGTGGTATCGCGCCGCATGCCGCCG TCCAAGTGCCCAATCGTGACCATCACCGCGATAGCCTCTAGCTCTGACAGCTACAACGTG ATCCCTGACAGGGTGACGCTGAAGGGCACGCTGCGCTGCACGGACAAACAGGTGCGGGTG GATGCCAAAAAGGCCGTCGCTGACGTGCTTCACGGCATCTGCGGATCGTTCGGTGCGATG TGCGACTTCAAGTGGCTCCCTGGCTACGATGTGACGGTGAACGCGGACAGCGCGTACGAC GTGGGGATGCGAGTGCTTACGCAGGTGATGCCCTCTACAGACCACGTTGTGGAGCTTTCC GCTTGCATGTCCCCTTCAGAGGACTTCAGCGAGTTTGCAAAGGTGGCACCTGCGAACTAC GTGGGCATCGGGTGCTACAACCCTGGGAGGGGGTGCACTGAGGTGAACCACAACGCGAAG TTCAAGGTGGATGAGGATGCGATGAAGATTGGTGTGAAGGTGCACTATGGCACTATCCAC GAGCTGCTCATGCAGTGA
  • Download Fasta

  • Fasta :-

    MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGKWLHI SQPESNCVVADLKGGAGDGPTVALRADIDALPVEELTDVPFASRKRGVMHACGHDTHAAM LLGATKLLLEDAGRIKGTVRLLFQPAEEVPPGGAKMMIEKGCMEGVAMVFAEHIMPEEKA PTGTVLVRKGPILSSSDTLHAEIVGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPIVTITAIASSSDSYNVIPDRVTLKGTLRCTDKQVRVDAKKAVADVLHGICGSFGAM CDFKWLPGYDVTVNADSAYDVGMRVLTQVMPSTDHVVELSACMSPSEDFSEFAKVAPANY VGIGCYNPGRGCTEVNHNAKFKVDEDAMKIGVKVHYGTIHELLMQ

  • title: metal binding site
  • coordinates: C112,H114,E147,E148,H173,N376
No Results
No Results
IDSitePeptideScoreMethod
LmxM.30.113034 SNPDLSFEEQ0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India